| Clone Name | rbaal7i18 |
|---|---|
| Clone Library Name | barley_pub |
>PLA2R_RABIT (P49260) 180 kDa secretory phospholipase A2 receptor precursor| (PLA2-R) Length = 1458 Score = 33.9 bits (76), Expect = 0.42 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%) Frame = -2 Query: 448 KW--GNPPPLENGSTSNLSTPPNGASSSDQPER**REV*SVRPFYHFDSSWWYESLTKMG 275 KW GNP N S S++ P+ +++DQ + S P +HF W++E K G Sbjct: 1030 KWLNGNPVAYSNWSPSDIINIPSYNTTADQKPIPLCALLSSNPNFHFTGKWYFEDCGKEG 1089 Query: 274 F 272 + Sbjct: 1090 Y 1090
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 33.5 bits (75), Expect = 0.54 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 2/83 (2%) Frame = -2 Query: 604 QCRILPASYL-PPNIS-SNVHPVVVAAHPSEANQFALGLTDGSVYVMEPLESERKWGNPP 431 Q + LP+S PP ++ S P A+HP+ + S + P G PP Sbjct: 984 QSQPLPSSPAQPPGLTQSQSLPPPAASHPTTGGLHQV--PSQSPFPQHPFVP----GGPP 1037 Query: 430 PLENGSTSNLSTPPNGASSSDQP 362 P+ S STPP G SSS QP Sbjct: 1038 PITPPSCPPTSTPPAGPSSSSQP 1060
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 32.7 bits (73), Expect = 0.93 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -2 Query: 442 GNPPPLENGSTSNLSTPPNGASSSDQP 362 G PPP+ S STPP G SSS QP Sbjct: 1034 GGPPPITPPSCPPTSTPPAGPSSSSQP 1060
>HLES_DROME (Q02308) Protein hairless| Length = 1077 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Frame = -2 Query: 589 PASYLPPNIS---SNVHPVVVAAHPSEANQFALGLTDGSVYVMEPLESERKWGNPPPLEN 419 P+ + P+++ + HP + H S A+ LTD S M S R P + Sbjct: 980 PSPHTHPHLAHPHQHPHPAALTTHHSPAHLATPKLTDSSTDQMSATSSHRTASTSPSSSS 1039 Query: 418 GSTSNLSTPPNGASSS 371 S S+ S +GASSS Sbjct: 1040 ASASS-SAATSGASSS 1054
>RIG_DROME (Q86BY9) Protein rigor mortis| Length = 1235 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/32 (46%), Positives = 21/32 (65%) Frame = -2 Query: 538 VAAHPSEANQFALGLTDGSVYVMEPLESERKW 443 +A P ++N+FA+ D SVYVME +ER W Sbjct: 747 IAWCPLDSNKFAVSGNDRSVYVMEFQPTERNW 778
>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan| glucanohydrolase) (Isozyme 1B) Length = 348 Score = 31.6 bits (70), Expect = 2.1 Identities = 14/56 (25%), Positives = 28/56 (50%) Frame = -2 Query: 538 VAAHPSEANQFALGLTDGSVYVMEPLESERKWGNPPPLENGSTSNLSTPPNGASSS 371 + + S + F LG+ +G V++P + +W PP + ++ +L P AS + Sbjct: 30 LGSRASPVSGFQLGVVEGEWRVVQPAYGQARWTTSPPPASPTSGSLRRPTLSASKA 85
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 30.0 bits (66), Expect = 6.0 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 18/96 (18%) Frame = -2 Query: 589 PASYLPPNISSNVHPVVVAAHPSEANQFALGLTDGS-----------VYVMEPLESERKW 443 P+S PP+ ++ V +AH S A + +D S EPLE+ Sbjct: 445 PSSSAPPSAPQSLPEPVASAHSSSAESESTSDSDSSSDSESESSSSDSEENEPLETPAPE 504 Query: 442 GNPP-----PLENGST--SNLSTPPNGASSSDQPER 356 PP L+N T S + PP G S++ P R Sbjct: 505 PEPPTTNKWQLDNWLTKVSQPAAPPEGPRSTEPPRR 540
>LGT_RHOPA (P60973) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 286 Score = 29.6 bits (65), Expect = 7.9 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Frame = -2 Query: 547 PVVVAAHPSEANQFAL----GLTDGSVYVMEPLESERKWGNPPPL 425 PV VA P +AL G+ G +Y L+ +R WG P P+ Sbjct: 13 PVAVAIGPFAIRWYALAYIAGIVIGWLYARMLLQRQRLWGGPSPI 57 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,760,372 Number of Sequences: 219361 Number of extensions: 1859506 Number of successful extensions: 4964 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4738 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4959 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)