ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24l19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATRN_MOUSE (Q9WU60) Attractin precursor (Mahogany protein) 32 0.38
2ATRN_RAT (Q99J86) Attractin precursor (Zitter protein) 31 0.64
3ATRN_HUMAN (O75882) Attractin precursor (Mahogany homolog) (DPPT-L) 29 2.4
4UL48_HCMVA (P16785) Probable large tegument protein 29 3.2
5HV1E_HUMAN (P01761) Ig heavy chain V-I region SIE 29 3.2
6NAS28_CAEEL (P98061) Zinc metalloproteinase nas-28 precursor (EC... 28 7.1
7AROG_SOLTU (P37822) Phospho-2-dehydro-3-deoxyheptonate aldolase ... 27 9.3

>ATRN_MOUSE (Q9WU60) Attractin precursor (Mahogany protein)|
          Length = 1428

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 270  KLKCLQNLYKAPQRQPVESFKGNVYP 193
            K KC++  YK P + P ++  GNVYP
Sbjct: 1012 KGKCIEGSYKGPVKMPSQASAGNVYP 1037



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>ATRN_RAT (Q99J86) Attractin precursor (Zitter protein)|
          Length = 1432

 Score = 31.2 bits (69), Expect = 0.64
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 270  KLKCLQNLYKAPQRQPVESFKGNVYP 193
            K KC++  YK P + P  +  GNVYP
Sbjct: 1016 KGKCIEGSYKGPVKMPSHASTGNVYP 1041



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>ATRN_HUMAN (O75882) Attractin precursor (Mahogany homolog) (DPPT-L)|
          Length = 1429

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 270  KLKCLQNLYKAPQRQPVESFKGNVYP 193
            K KC++  YK P + P ++  GN YP
Sbjct: 1013 KGKCIEGSYKGPVKMPSQAPTGNFYP 1038



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>UL48_HCMVA (P16785) Probable large tegument protein|
          Length = 2241

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 142 HPRIKILIHREGFIRFRRINIALERFHWLSLR 237
           HP+++ ++ R+   R R IN  L  FH L +R
Sbjct: 811 HPQLREMLRRDEQTRLRLINAVLSMFHTLVMR 842



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>HV1E_HUMAN (P01761) Ig heavy chain V-I region SIE|
          Length = 124

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 271 EVKMPSKSIQSTAKTTSGIFQGQCLS 194
           EVK P  S++ T KT+ G F G  +S
Sbjct: 10  EVKKPGSSVRVTCKTSGGTFSGYTIS 35



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>NAS28_CAEEL (P98061) Zinc metalloproteinase nas-28 precursor (EC 3.4.24.21)|
           (Nematode astacin 28)
          Length = 497

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -3

Query: 337 RREKIGHTASFWRFSVAFYPNLEVKMPSKSIQSTAKTTSGIFQGQCLS 194
           +R+ I  T +FW  SV  +   + K+ + +I +  K         CLS
Sbjct: 119 KRQAIVDTTNFWSVSVPIFYQFDTKLSATNIANVRKAIQFWNDNSCLS 166



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>AROG_SOLTU (P37822) Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplast|
           precursor (EC 2.5.1.54) (Phospho-2-keto-3-deoxyheptonate
           aldolase 2) (DAHP synthetase 2)
           (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2)
          Length = 511

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
 Frame = -1

Query: 318 ILLLFGGSP*LSIPILKLKCLQNLYKAPQRQPVESFKGNVYPAESYETFPVNQNL---DS 148
           ++L+FGG     +P++K+  +   +  P+  P+E   G   P  SY+   +N +     S
Sbjct: 150 VVLMFGGQ----VPVIKVGRMAGQFAKPRSDPLEEINGVKLP--SYKGDNINGDTFDEKS 203

Query: 147 RVP 139
           R+P
Sbjct: 204 RIP 206


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,365,119
Number of Sequences: 219361
Number of extensions: 940885
Number of successful extensions: 1950
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1950
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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