ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24l19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome... 64 3e-07
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 64 3e-07
4gb|AC124465.6| Mus musculus BAC clone RP24-156M16 from chromosom... 46 0.080
5gb|AC159983.8| Mus musculus BAC clone RP23-192C23 from chromosom... 46 0.080
6gb|AC091782.5| Genomic sequence for Mus musculus, clone RP23-103... 46 0.080
7ref|XM_420090.1| PREDICTED: Gallus gallus similar to Ammd protei... 44 0.32
8emb|AL009047.1|HS1156N12 Human DNA sequence from clone RP5-1156N... 44 0.32
9gb|AC122217.4| Mus musculus BAC clone RP23-118J3 from 16, comple... 44 0.32
10gb|AF302117.1| Rattus norvegicus glutamate receptor subunit GluR... 42 1.3
11gb|AC116726.11| Mus musculus chromosome 10, clone RP23-285L15, c... 42 1.3
12ref|XM_869026.1| PREDICTED: Bos taurus hypothetical protein LOC6... 42 1.3
13emb|BX936299.14| Zebrafish DNA sequence from clone CH211-2I17 in... 42 1.3
14emb|BX908762.11| Zebrafish DNA sequence from clone CH211-222N22 ... 42 1.3
15gb|AC005228.1| Homo sapiens PAC clone RP5-1100A7 from 7, complet... 42 1.3
16gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, com... 42 1.3
17emb|AL138711.13| Human DNA sequence from clone RP11-495J3 on chr... 42 1.3
18emb|X85021.1|SCXLTORFS S.cerevisiae DNA from left arm of chromos... 42 1.3
19gb|AC165255.2| Mus musculus BAC clone RP23-239B8 from chromosome... 42 1.3
20gb|AC151284.3| Mus musculus BAC clone RP23-391C14 from chromosom... 42 1.3
21gb|AC026396.8| Homo sapiens chromosome 10 clone RP11-89K18, comp... 42 1.3
22gb|AC144908.17| Mus musculus chromosome 5, clone RP23-102O19, co... 42 1.3
23gb|AF234171.2|AF234171 Mus musculus STAT5B (Stat5b) gene, comple... 42 1.3
24gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell ... 42 1.3
25gb|AC151264.2| Mus musculus BAC clone RP24-347M6 from 17, comple... 42 1.3
26emb|Z49384.1|SCYJL109C S.cerevisiae chromosome X reading frame O... 42 1.3
27emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chr... 42 1.3
28emb|AL732419.6| Mouse DNA sequence from clone RP23-228A20 on chr... 42 1.3
29gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosom... 40 5.0
30gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, comp... 40 5.0
31gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome... 40 5.0
32gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, c... 40 5.0
33gb|AC166543.2| Nectria haematococca clone JGIAYWI-5I13, complete... 40 5.0
34gb|BC083306.1| Danio rerio zgc:101880, mRNA (cDNA clone MGC:1018... 40 5.0
35emb|AJ251835.1|MMU251835 Mus musculus Kcnq1, Ltrpc5, Mash2, Tapa... 40 5.0
36emb|BX927355.6| Zebrafish DNA sequence from clone CH211-129L20 i... 40 5.0
37gb|AF287479.1| Ovis aries interleukin 2 precursor (IL-2) gene, c... 40 5.0
38gb|AF535145.1| Capra hircus interleukin-2 (IL2) gene, complete cds 40 5.0
39dbj|AK128694.1| Homo sapiens cDNA FLJ46861 fis, clone UTERU3011092 40 5.0
40dbj|AK126781.1| Homo sapiens cDNA FLJ44830 fis, clone BRACE3047018 40 5.0
41gb|AC106821.2| Homo sapiens chromosome 5 clone RP11-730N24, comp... 40 5.0
42gb|AC026428.5| Homo sapiens chromosome 5 clone CTD-2203I6, compl... 40 5.0
43gb|AC022113.6| Homo sapiens chromosome 5 clone CTC-461F20, compl... 40 5.0
44gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chrom... 40 5.0
45gb|AC154778.2| Mus musculus BAC clone RP24-459I17 from chromosom... 40 5.0
46dbj|AK044147.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 5.0
47gb|AC108865.3| Homo sapiens BAC clone RP11-11N5 from 4, complete... 40 5.0
48gb|AC068490.4| Homo sapiens BAC clone RP11-789K7 from 2, complet... 40 5.0
49gb|AF139595.1|AF139595 Mus musculus Mash2 gene, complete cds 40 5.0
50gb|AC011489.6|AC011489 Homo sapiens chromosome 19 clone CTB-179K... 40 5.0
51emb|AJ554826.1|HIM554826 Human immunodeficiency virus type 1 pro... 40 5.0
52gb|AC015800.13| Mus musculus chromosome 7, clone RP23-366M16, co... 40 5.0
53emb|CR931759.10| Zebrafish DNA sequence from clone DKEYP-39E9 in... 40 5.0
54emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on ch... 40 5.0
55gb|AC127255.4| Mus musculus BAC clone RP24-291I7 from 5, complet... 40 5.0
56gb|AC139323.4| Mus musculus BAC clone RP24-383P22 from 13, compl... 40 5.0
57emb|AL807795.7| Mouse DNA sequence from clone RP23-199A9 on chro... 40 5.0
58emb|AJ251788.1|MMU251788 Mus musculus Tssc6 gene 40 5.0
59dbj|AP002736.1| Mus musculus genomic DNA, chromosome 7, clone:B3... 40 5.0 
>gb|AC145365.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0069E11, complete sequence
          Length = 136959

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                         
Query: 248   agattttgaaggcattttaacttcaagattgggatagaaagctacggagaacctccaaaa 307
             ||||||||| ||||||   ||||||||||  |||||| ||||| | ||||||| ||||||
Sbjct: 17812 agattttgatggcattgccacttcaagatcaggataggaagctgcagagaaccgccaaaa 17871

                                                         
Query: 308   agaagcagtatgtcctattttctcacgacgaaaagctatttgtt 351
             || |||| | | ||| ||||||||||| || |||||||| ||||
Sbjct: 17872 aggagcactttctcccattttctcacgccgcaaagctatctgtt 17915
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                           
Query: 248     agattttgaaggcattttaacttcaagattgggatagaaagctacggagaacctccaaaa 307
               ||||||||| ||||||   ||||||||||  |||||| ||||| | ||||||| ||||||
Sbjct: 8338886 agattttgatggcattgccacttcaagatcaggataggaagctgcagagaaccgccaaaa 8338945

                                                           
Query: 308     agaagcagtatgtcctattttctcacgacgaaaagctatttgtt 351
               || |||| | | ||| ||||||||||| || |||||||| ||||
Sbjct: 8338946 aggagcactttctcccattttctcacgccgcaaagctatctgtt 8338989
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 86/104 (82%)
 Strand = Plus / Plus

                                                                           
Query: 248     agattttgaaggcattttaacttcaagattgggatagaaagctacggagaacctccaaaa 307
               ||||||||| ||||||   ||||||||||  |||||| ||||| | ||||||| ||||||
Sbjct: 8409649 agattttgatggcattgccacttcaagatcaggataggaagctgcagagaaccgccaaaa 8409708

                                                           
Query: 308     agaagcagtatgtcctattttctcacgacgaaaagctatttgtt 351
               || |||| | | ||| ||||||||||| || |||||||| ||||
Sbjct: 8409709 aggagcactttctcccattttctcacgccgcaaagctatctgtt 8409752
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>gb|AC124465.6| Mus musculus BAC clone RP24-156M16 from chromosome 13, complete
            sequence
          Length = 169973

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 42   aacaagcacacacatatacatgc 64
            |||||||||||||||||||||||
Sbjct: 6293 aacaagcacacacatatacatgc 6315
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>gb|AC159983.8| Mus musculus BAC clone RP23-192C23 from chromosome 13, complete
             sequence
          Length = 193502

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 42    aacaagcacacacatatacatgc 64
             |||||||||||||||||||||||
Sbjct: 84859 aacaagcacacacatatacatgc 84881
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>gb|AC091782.5| Genomic sequence for Mus musculus, clone RP23-103P23, complete sequence
          Length = 195574

 Score = 46.1 bits (23), Expect = 0.080
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 42    aacaagcacacacatatacatgc 64
             |||||||||||||||||||||||
Sbjct: 84819 aacaagcacacacatatacatgc 84841
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>ref|XM_420090.1| PREDICTED: Gallus gallus similar to Ammd protein (LOC422088), mRNA
          Length = 1671

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 167 accgggaaggtttcataagattccgcagga 196
           ||||||||||||||| |||| |||||||||
Sbjct: 119 accgggaaggtttcagaagagtccgcagga 90
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>emb|AL009047.1|HS1156N12 Human DNA sequence from clone RP5-1156N12 on chromosome X, complete
             sequence
          Length = 146360

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 43    acaagcacacacatatacatgc 64
             ||||||||||||||||||||||
Sbjct: 48729 acaagcacacacatatacatgc 48750
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>gb|AC122217.4| Mus musculus BAC clone RP23-118J3 from 16, complete sequence
          Length = 222795

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 294   gagaacctccaaaaagaagcag 315
             ||||||||||||||||||||||
Sbjct: 47050 gagaacctccaaaaagaagcag 47071
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>gb|AF302117.1| Rattus norvegicus glutamate receptor subunit GluR1 gene, promoter and
            partial cds
          Length = 5710

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 43   acaagcacacacatatacatg 63
            |||||||||||||||||||||
Sbjct: 1222 acaagcacacacatatacatg 1242
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>gb|AC116726.11| Mus musculus chromosome 10, clone RP23-285L15, complete sequence
          Length = 185427

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    aacaagcacacacatatacat 62
             |||||||||||||||||||||
Sbjct: 64338 aacaagcacacacatatacat 64318
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>ref|XM_869026.1| PREDICTED: Bos taurus hypothetical protein LOC616894 (LOC616894),
           mRNA
          Length = 921

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 245 tatagattttgaaggcatttt 265
           |||||||||||||||||||||
Sbjct: 873 tatagattttgaaggcatttt 853
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>emb|BX936299.14| Zebrafish DNA sequence from clone CH211-2I17 in linkage group 1,
             complete sequence
          Length = 132306

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 243   tgtatagattttgaaggcatt 263
             |||||||||||||||||||||
Sbjct: 71739 tgtatagattttgaaggcatt 71719
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>emb|BX908762.11| Zebrafish DNA sequence from clone CH211-222N22 in linkage group 3,
             complete sequence
          Length = 113490

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 241   tttgtatagattttgaaggca 261
             |||||||||||||||||||||
Sbjct: 22846 tttgtatagattttgaaggca 22866
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>gb|AC005228.1| Homo sapiens PAC clone RP5-1100A7 from 7, complete sequence
          Length = 102008

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 190 cgcaggataaacattgccctt 210
           |||||||||||||||||||||
Sbjct: 942 cgcaggataaacattgccctt 962
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>gb|AC119831.6| Mus musculus chromosome 9, clone RP23-281F13, complete sequence
          Length = 195918

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 64     ctacagctagctctgctctcc 84
              |||||||||||||||||||||
Sbjct: 137369 ctacagctagctctgctctcc 137349
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>emb|AL138711.13| Human DNA sequence from clone RP11-495J3 on chromosome 13q12.3-14.11
             Contains a ribosomal protein S12 (RPS12) pseudogene and a
             CpG island, complete sequence
          Length = 182178

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    acaagcacacacatatacatg 63
             |||||||||||||||||||||
Sbjct: 31129 acaagcacacacatatacatg 31149
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>emb|X85021.1|SCXLTORFS S.cerevisiae DNA from left arm of chromosome X
          Length = 37549

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 342  gctatttgttatattagtaag 362
            |||||||||||||||||||||
Sbjct: 5582 gctatttgttatattagtaag 5562
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>gb|AC165255.2| Mus musculus BAC clone RP23-239B8 from chromosome 13, complete sequence
          Length = 205903

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    aacaagcacacacatatacat 62
             |||||||||||||||||||||
Sbjct: 96457 aacaagcacacacatatacat 96477



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aacaagcacacacatataca 61
             ||||||||||||||||||||
Sbjct: 97891 aacaagcacacacatataca 97910
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>gb|AC151284.3| Mus musculus BAC clone RP23-391C14 from chromosome 17, complete
             sequence
          Length = 202363

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    cacacacatatacatgctaca 68
             |||||||||||||||||||||
Sbjct: 32207 cacacacatatacatgctaca 32187
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>gb|AC026396.8| Homo sapiens chromosome 10 clone RP11-89K18, complete sequence
          Length = 162057

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    acaagcacacacatatacatg 63
             |||||||||||||||||||||
Sbjct: 79204 acaagcacacacatatacatg 79184
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>gb|AC144908.17| Mus musculus chromosome 5, clone RP23-102O19, complete sequence
          Length = 212299

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     caagcacacacatatacatgc 64
              |||||||||||||||||||||
Sbjct: 131349 caagcacacacatatacatgc 131329
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>gb|AF234171.2|AF234171 Mus musculus STAT5B (Stat5b) gene, complete cds
          Length = 71512

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    cacacacatatacatgctaca 68
             |||||||||||||||||||||
Sbjct: 32045 cacacacatatacatgctaca 32025
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>gb|AC073918.13|AC073918 Mus musculus 11 BAC RP23-362J7 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 195667

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     cacacacatatacatgctaca 68
              |||||||||||||||||||||
Sbjct: 142184 cacacacatatacatgctaca 142164
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>gb|AC151264.2| Mus musculus BAC clone RP24-347M6 from 17, complete sequence
          Length = 153677

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     cacacacatatacatgctaca 68
              |||||||||||||||||||||
Sbjct: 106363 cacacacatatacatgctaca 106343
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>emb|Z49384.1|SCYJL109C S.cerevisiae chromosome X reading frame ORF YJL109c
          Length = 6127

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 342  gctatttgttatattagtaag 362
            |||||||||||||||||||||
Sbjct: 1095 gctatttgttatattagtaag 1075
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>emb|AL591466.8| Mouse DNA sequence from clone RP23-279L23 on chromosome 11, complete
              sequence
          Length = 239847

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 48     cacacacatatacatgctaca 68
              |||||||||||||||||||||
Sbjct: 176500 cacacacatatacatgctaca 176480
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>emb|AL732419.6| Mouse DNA sequence from clone RP23-228A20 on chromosome X, complete
              sequence
          Length = 194380

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     caagcacacacatatacatgc 64
              |||||||||||||||||||||
Sbjct: 186975 caagcacacacatatacatgc 186955
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>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence
          Length = 227388

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     aagcacacacatatacatgc 64
              ||||||||||||||||||||
Sbjct: 169137 aagcacacacatatacatgc 169118
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>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence
          Length = 153903

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     aagcacacacatatacatgc 64
              ||||||||||||||||||||
Sbjct: 145457 aagcacacacatatacatgc 145476
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>gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome 16, complete sequence
          Length = 193474

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     acaagcacacacatatacat 62
              ||||||||||||||||||||
Sbjct: 137342 acaagcacacacatatacat 137361
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>gb|AC104920.10| Mus musculus chromosome 10, clone RP23-360H23, complete sequence
          Length = 212273

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    aagcacacacatatacatgc 64
             ||||||||||||||||||||
Sbjct: 50235 aagcacacacatatacatgc 50216
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>gb|AC166543.2| Nectria haematococca clone JGIAYWI-5I13, complete sequence
          Length = 40607

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 109  tcttgtcatcctcccagtcactgt 132
            |||||||| |||||||||||||||
Sbjct: 4753 tcttgtcaccctcccagtcactgt 4730
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>gb|BC083306.1| Danio rerio zgc:101880, mRNA (cDNA clone MGC:101880 IMAGE:7254020),
           complete cds
          Length = 922

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  aacaagcacacacatataca 61
           ||||||||||||||||||||
Sbjct: 388 aacaagcacacacatataca 369
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>emb|AJ251835.1|MMU251835 Mus musculus Kcnq1, Ltrpc5, Mash2, Tapa-1, Tssc4 and Tssc6 genes,
              alternative transcripts
          Length = 249487

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     acacacatatacatgctaca 68
              ||||||||||||||||||||
Sbjct: 221926 acacacatatacatgctaca 221907
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>emb|BX927355.6| Zebrafish DNA sequence from clone CH211-129L20 in linkage group 1,
             complete sequence
          Length = 75717

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   gtatagattttgaaggcatt 263
             ||||||||||||||||||||
Sbjct: 60534 gtatagattttgaaggcatt 60553
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>gb|AF287479.1| Ovis aries interleukin 2 precursor (IL-2) gene, complete cds
          Length = 4815

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 43   acaagcacacacatatacat 62
            ||||||||||||||||||||
Sbjct: 2575 acaagcacacacatatacat 2556
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>gb|AF535145.1| Capra hircus interleukin-2 (IL2) gene, complete cds
          Length = 4806

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 43   acaagcacacacatatacat 62
            ||||||||||||||||||||
Sbjct: 2569 acaagcacacacatatacat 2550
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>dbj|AK128694.1| Homo sapiens cDNA FLJ46861 fis, clone UTERU3011092
          Length = 4067

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  aagcacacacatatacatgc 64
           ||||||||||||||||||||
Sbjct: 383 aagcacacacatatacatgc 364
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>dbj|AK126781.1| Homo sapiens cDNA FLJ44830 fis, clone BRACE3047018
          Length = 4450

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 46  agcacacacatatacatgct 65
           ||||||||||||||||||||
Sbjct: 589 agcacacacatatacatgct 570
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>gb|AC106821.2| Homo sapiens chromosome 5 clone RP11-730N24, complete sequence
          Length = 151355

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aacaagcacacacatataca 61
             ||||||||||||||||||||
Sbjct: 36795 aacaagcacacacatataca 36814
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>gb|AC026428.5| Homo sapiens chromosome 5 clone CTD-2203I6, complete sequence
          Length = 85149

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aacaagcacacacatataca 61
             ||||||||||||||||||||
Sbjct: 10761 aacaagcacacacatataca 10742
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>gb|AC022113.6| Homo sapiens chromosome 5 clone CTC-461F20, complete sequence
          Length = 188570

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    attttgaaggcattttaact 269
              ||||||||||||||||||||
Sbjct: 134496 attttgaaggcattttaact 134515
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>gb|AC158242.4| Pan troglodytes BAC clone CH251-354C10 from chromosome unknown,
             complete sequence
          Length = 182200

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   attttgaaggcattttaact 269
             ||||||||||||||||||||
Sbjct: 89890 attttgaaggcattttaact 89909
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>gb|AC154778.2| Mus musculus BAC clone RP24-459I17 from chromosome 12, complete sequence
          Length = 155367

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     acaagcacacacatatacat 62
              ||||||||||||||||||||
Sbjct: 107075 acaagcacacacatatacat 107056
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>dbj|AK044147.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length
           enriched library, clone:A830095B13
           product:unclassifiable, full insert sequence
          Length = 1883

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  acaagcacacacatatacat 62
           ||||||||||||||||||||
Sbjct: 650 acaagcacacacatatacat 669
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>gb|AC108865.3| Homo sapiens BAC clone RP11-11N5 from 4, complete sequence
          Length = 102733

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    acaagcacacacatatacat 62
             ||||||||||||||||||||
Sbjct: 59851 acaagcacacacatatacat 59832
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>gb|AC068490.4| Homo sapiens BAC clone RP11-789K7 from 2, complete sequence
          Length = 156900

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   tgaaggcattttaacttcaa 273
             ||||||||||||||||||||
Sbjct: 48267 tgaaggcattttaacttcaa 48286
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>gb|AF139595.1|AF139595 Mus musculus Mash2 gene, complete cds
          Length = 16479

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   acacacatatacatgctaca 68
            ||||||||||||||||||||
Sbjct: 2560 acacacatatacatgctaca 2541
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>gb|AC011489.6|AC011489 Homo sapiens chromosome 19 clone CTB-179K24, complete sequence
          Length = 164034

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 46     agcacacacatatacatgct 65
              ||||||||||||||||||||
Sbjct: 161397 agcacacacatatacatgct 161378
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>emb|AJ554826.1|HIM554826 Human immunodeficiency virus type 1 proviral partial env gene for
           gp120 protein, V3V5 sequence, isolate 99CM.MP1387bis
          Length = 479

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 342 gctatttgttatattagtaa 361
           ||||||||||||||||||||
Sbjct: 330 gctatttgttatattagtaa 311
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>gb|AC015800.13| Mus musculus chromosome 7, clone RP23-366M16, complete sequence
          Length = 200026

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    acacacatatacatgctaca 68
             ||||||||||||||||||||
Sbjct: 37586 acacacatatacatgctaca 37605
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>emb|CR931759.10| Zebrafish DNA sequence from clone DKEYP-39E9 in linkage group 19,
             complete sequence
          Length = 110315

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    aacaagcacacacatataca 61
             ||||||||||||||||||||
Sbjct: 42220 aacaagcacacacatataca 42201
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>emb|AL732521.18| Mouse DNA sequence from clone RP23-134A17 on chromosome 4, complete
              sequence
          Length = 207223

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     acaagcacacacatatacat 62
              ||||||||||||||||||||
Sbjct: 198651 acaagcacacacatatacat 198632
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>gb|AC127255.4| Mus musculus BAC clone RP24-291I7 from 5, complete sequence
          Length = 153492

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    aagcacacacatatacatgc 64
             ||||||||||||||||||||
Sbjct: 80070 aagcacacacatatacatgc 80089
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>gb|AC139323.4| Mus musculus BAC clone RP24-383P22 from 13, complete sequence
          Length = 231965

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     acacacatatacatgctaca 68
              ||||||||||||||||||||
Sbjct: 168886 acacacatatacatgctaca 168867
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>emb|AL807795.7| Mouse DNA sequence from clone RP23-199A9 on chromosome X, complete
              sequence
          Length = 152159

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     acaagcacacacatatacat 62
              ||||||||||||||||||||
Sbjct: 105079 acaagcacacacatatacat 105098
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>emb|AJ251788.1|MMU251788 Mus musculus Tssc6 gene
          Length = 249487

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     acacacatatacatgctaca 68
              ||||||||||||||||||||
Sbjct: 221926 acacacatatacatgctaca 221907
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>dbj|AP002736.1| Mus musculus genomic DNA, chromosome 7, clone:B308O17, complete
             sequences
          Length = 93265

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    acacacatatacatgctaca 68
             ||||||||||||||||||||
Sbjct: 89095 acacacatatacatgctaca 89076


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,580,579
Number of Sequences: 3902068
Number of extensions: 3580579
Number of successful extensions: 105888
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105668
Number of HSP's gapped (non-prelim): 220
length of query: 372
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 350
effective length of database: 17,147,199,772
effective search space: 6001519920200
effective search space used: 6001519920200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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