| Clone Name | rbaal24l18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3 | 32 | 0.89 | 2 | M3K4_MOUSE (O08648) Mitogen-activated protein kinase kinase kina... | 30 | 4.4 | 3 | ACC2B_BRARE (Q708S7) Amiloride-sensitive cation channel 2-B, neu... | 29 | 9.9 | 4 | ZFP6_ARATH (Q39265) Zinc finger protein 6 | 29 | 9.9 | 5 | UL16_HHV11 (P10200) Protein UL16 | 29 | 9.9 |
|---|
>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3| Length = 465 Score = 32.3 bits (72), Expect = 0.89 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -2 Query: 320 AILATDCVCVCVCLFAKKKDCCCVIHVFLFHVCV 219 +IL++ CVCVCVC+ C CV+ +VCV Sbjct: 367 SILSSVCVCVCVCVCMYV--CMCVMESACVYVCV 398
>M3K4_MOUSE (O08648) Mitogen-activated protein kinase kinase kinase 4 (EC| 2.7.11.25) (MAPK/ERK kinase kinase 4) (MEK kinase 4) (MEKK 4) Length = 1597 Score = 30.0 bits (66), Expect = 4.4 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = -3 Query: 541 RPSPLHQCCPRAILWCFXSR*APPSIESDASPSIDSAGWRTLF 413 +P P +CCP A C A S+ESD D TL+ Sbjct: 32 QPEPDPECCPAARQECMLGESARKSMESDPEDFSDETNTETLY 74
>ACC2B_BRARE (Q708S7) Amiloride-sensitive cation channel 2-B, neuronal| (Acid-sensing ion channel 1.2) (ZASIC1.2) Length = 501 Score = 28.9 bits (63), Expect = 9.9 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = -2 Query: 353 TLHGLPHIWRFAILATDCVCVCVCLFAKKKDCCCVIHVFLFHVCVD 216 TLHG+ HI+ + + C C+ V F FL +VC+D Sbjct: 31 TLHGISHIFSYEKITAKC-CLWVVFFLSSL-------TFLMYVCID 68
>ZFP6_ARATH (Q39265) Zinc finger protein 6| Length = 197 Score = 28.9 bits (63), Expect = 9.9 Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 2/32 (6%) Frame = -1 Query: 495 VXSVARLPHLLNQMH--PHRLIRPAGEHYXWI 406 + + A LPHLL+Q H PH ++ P+ W+ Sbjct: 95 LSAFAPLPHLLSQPHPPPHMMLSPSSSSSKWL 126
>UL16_HHV11 (P10200) Protein UL16| Length = 373 Score = 28.9 bits (63), Expect = 9.9 Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 6/68 (8%) Frame = -2 Query: 431 RLENIIXGLHNCAPI*RKASPKQKVCTLHGLPHI------WRFAILATDCVCVCVCLFAK 270 R+ N G +CAP PHI W +++ C CV CL+AK Sbjct: 236 RITNHPGGCESCAPP----------------PHIDSANALWLSSVVTESCPCVAPCLWAK 279 Query: 269 KKDCCCVI 246 C + Sbjct: 280 MAQCTLAV 287 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,775,277 Number of Sequences: 219361 Number of extensions: 1786135 Number of successful extensions: 3777 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3631 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3747 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)