ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal25a15 |
|---|---|
| Clone Library Name | barley_pub |
>SUS1_HORVU (P31922) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) Length = 807 Score = 104 bits (260), Expect = 1e-22 Identities = 51/51 (100%), Positives = 51/51 (100%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 346 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS Sbjct: 755 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 805
>SUS1_ORYSA (P30298) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) Length = 808 Score = 101 bits (252), Expect = 1e-21 Identities = 48/51 (94%), Positives = 51/51 (100%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 346 RLMTLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+AVPLAVDGES+ Sbjct: 756 RLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAVDGEST 806
>SUS2_ORYSA (P31924) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 94.4 bits (233), Expect = 2e-19 Identities = 44/51 (86%), Positives = 48/51 (94%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 346 RLMTLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE S Sbjct: 764 RLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGEPS 814
>SUS2_MAIZE (P49036) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 94.4 bits (233), Expect = 2e-19 Identities = 44/51 (86%), Positives = 48/51 (94%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 346 RLMTLTGVYGFWKYVSNLERRETRRYLEM YALKYR++A+ VPLAV+GE S Sbjct: 764 RLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVEGEPS 814
>SUS2_HORVU (P31923) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 816 Score = 93.2 bits (230), Expect = 3e-19 Identities = 43/51 (84%), Positives = 48/51 (94%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 346 RLMTL+GVYGFWKYVSNL+RRETRRYLEM YALKYR +AA VPLAV+GE+S Sbjct: 764 RLMTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAVEGETS 814
>SUS2_TULGE (Q41607) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 820 Score = 92.8 bits (229), Expect = 5e-19 Identities = 42/51 (82%), Positives = 49/51 (96%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 346 RL+TL GVYGFWKYVSNL+RRET+RYLEMFYALKYR+LA +VPLAVDGE++ Sbjct: 760 RLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVDGEAA 810
>SUS1_MAIZE (P04712) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) (Shrunken-1) Length = 802 Score = 90.5 bits (223), Expect = 2e-18 Identities = 42/47 (89%), Positives = 45/47 (95%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RLMTLTGVYGFWKYVSNLERRETRRY+EMFYALKYRSLA+ VPL+ D Sbjct: 756 RLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD 802
>SUS3_ORYSA (Q43009) Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 3) Length = 816 Score = 90.1 bits (222), Expect = 3e-18 Identities = 40/51 (78%), Positives = 47/51 (92%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 346 RLMTL+GVYGFWKYV+NL+RRETRRYLEM YALKYR +A VPLA++GE+S Sbjct: 764 RLMTLSGVYGFWKYVTNLDRRETRRYLEMLYALKYRKMATTVPLAIEGEAS 814
>SUS1_TULGE (Q41608) Sucrose synthase 1 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) Length = 805 Score = 89.7 bits (221), Expect = 4e-18 Identities = 41/47 (87%), Positives = 45/47 (95%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RLMTL GVYGFWKYVSNL+RRETRRYLEMFYALKYR+LA +VPLA+D Sbjct: 758 RLMTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAID 804
>SUSY_BETVU (Q42652) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Fragment) Length = 766 Score = 85.5 bits (210), Expect = 7e-17 Identities = 41/51 (80%), Positives = 43/51 (84%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVDGESS 346 RLMTL GVYGFWKYVS LERRETRRYLEMFY LK+R LA +VPLA D E S Sbjct: 705 RLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATDEEPS 755
>SUSY_PHAAU (Q01390) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 85.5 bits (210), Expect = 7e-17 Identities = 39/47 (82%), Positives = 45/47 (95%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLAV+ Sbjct: 759 RLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805
>SUSY_SOYBN (P13708) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Nodulin-100) Length = 805 Score = 84.0 bits (206), Expect = 2e-16 Identities = 38/47 (80%), Positives = 44/47 (93%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TLTGVYGFWK+VSNL+RRE+RRYLEMFYALKYR LA +VPLA + Sbjct: 759 RLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805
>SUSY_MEDSA (O65026) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 82.8 bits (203), Expect = 5e-16 Identities = 38/47 (80%), Positives = 44/47 (93%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+ Sbjct: 759 RLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805
>SUSY_VICFA (P31926) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 806 Score = 82.8 bits (203), Expect = 5e-16 Identities = 38/47 (80%), Positives = 44/47 (93%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+ Sbjct: 759 RLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805
>SUS2_ARATH (Q00917) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 78.2 bits (191), Expect = 1e-14 Identities = 35/47 (74%), Positives = 41/47 (87%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TL GVY FWK+VS LERRETRRYLEMFY+LK+R LA ++PLA D Sbjct: 757 RLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803
>SUS2_PEA (O24301) Sucrose synthase 2 (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) Length = 809 Score = 77.8 bits (190), Expect = 2e-14 Identities = 36/45 (80%), Positives = 39/45 (86%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLA 364 RLMTL GVY FWKYVS LERRETRRYLEMFY LK+R LA +VP+A Sbjct: 763 RLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807
>SUS1_DAUCA (P49035) Sucrose synthase isoform I (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 1) (Susy*Dc1) Length = 808 Score = 77.0 bits (188), Expect = 3e-14 Identities = 36/47 (76%), Positives = 40/47 (85%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TL GVYGFWK+VS L+R E RRYLEMFYALKYR LA +VPLA D Sbjct: 761 RLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKD 807
>SUSY_ALNGL (P49034) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 803 Score = 76.3 bits (186), Expect = 4e-14 Identities = 35/47 (74%), Positives = 42/47 (89%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TLTGV FWK+VSNL+R E+RRY+EMFYALKYR LA +VPLAV+ Sbjct: 757 RLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803
>SUS1_ARATH (P49040) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 806 Score = 76.3 bits (186), Expect = 4e-14 Identities = 38/47 (80%), Positives = 41/47 (87%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TLTGVYGFWK+VSNL+R E RRYLEMFYALKYR L AVPLA D Sbjct: 761 RLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPL--AVPLAQD 805
>SUS2_DAUCA (O49845) Sucrose synthase isoform II (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase 2) (Susy*Dc2) Length = 801 Score = 75.1 bits (183), Expect = 1e-13 Identities = 36/47 (76%), Positives = 41/47 (87%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TL GVYGFWK+VS L+R E RRYLEMF ALKYR+LA +VPLAVD Sbjct: 755 RLLTLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLAVD 801
>SUSY_LYCES (P49037) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) Length = 805 Score = 74.3 bits (181), Expect = 2e-13 Identities = 34/47 (72%), Positives = 39/47 (82%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TL VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA + Sbjct: 759 RLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805
>SUS2_SOLTU (P49039) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS65) Length = 805 Score = 73.2 bits (178), Expect = 4e-13 Identities = 34/47 (72%), Positives = 39/47 (82%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 RL+TL VYGFWK+VS L+R E RRYLEMFYALK+R LA VPLAV+ Sbjct: 759 RLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805
>SUS1_SOLTU (P10691) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (SS16) Length = 805 Score = 72.4 bits (176), Expect = 6e-13 Identities = 33/46 (71%), Positives = 38/46 (82%) Frame = -3 Query: 495 LMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 358 L+TL VYGFWK+VS L+R E RRYLEMFYALKYR +A AVPLA + Sbjct: 760 LLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805
>SUSY_SACOF (P31925) Sucrose synthase (EC 2.4.1.13) (Sucrose-UDP| glucosyltransferase) (Fragment) Length = 218 Score = 57.0 bits (136), Expect = 3e-08 Identities = 26/35 (74%), Positives = 30/35 (85%) Frame = -3 Query: 498 RLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKY 394 RLMTLTG YGFW YVS LER +T RY++MFYAL+Y Sbjct: 184 RLMTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217
>FCR1_CANAL (O93870) Fluconazole resistance protein 1| Length = 517 Score = 30.8 bits (68), Expect = 2.1 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = +2 Query: 89 DRQRNIALNSLMKDEHHGQAFIRGGWHEPASSTAQDLTNVP-------RHQIAHPTTDRP 247 D RN+ +S + EH G+AFI P +S Q T+ P + ++ P++D Sbjct: 175 DPNRNLKSSSRLFAEHKGEAFI----GSPVTSPQQMPTSNPFRRTSMFKEELESPSSDHY 230 Query: 248 NENYGRQIIAQP 283 NE+ Q + +P Sbjct: 231 NESIFSQSVDEP 242
>TOP1_AERPE (Q9YB01) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| (Omega-protein) (Relaxing enzyme) (Untwisting enzyme) (Swivelase) Length = 673 Score = 30.4 bits (67), Expect = 2.8 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +3 Query: 141 GRRLFEAAGMNQQAALPKTSRMCRDIKSHTPRQTDQMKTTVDK 269 GRR+ +AG Q L + R R+I H P+ + +K T +K Sbjct: 183 GRRVILSAGRVQSPTLVEAYRRWREINLHVPKASVAVKITAEK 225
>SYY_NITWN (Q3SS12) Tyrosyl-tRNA synthetase (EC 6.1.1.1) (Tyrosine--tRNA| ligase) (TyrRS) Length = 417 Score = 30.0 bits (66), Expect = 3.6 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -3 Query: 489 TLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPL 367 T+ VY +W+Y N+E + R+L++F L +A L Sbjct: 250 TMLPVYDYWQYWRNVEDADVGRFLKLFTILPMGEIAKLAAL 290
>SDS3_MOUSE (Q8BR65) Sin3 histone deacetylase corepressor complex component| SDS3 (Suppressor of defective silencing 3 protein homolog) Length = 328 Score = 30.0 bits (66), Expect = 3.6 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Frame = +1 Query: 214 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAAALAVDRQWNCS 381 T + D +T KL+ A+ +SP P+ P E+ + L D++W Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271 Query: 382 SQATVLESVEHLQVTASLA 438 SQA LES ++ +++ ++ Sbjct: 272 SQAIYLESKDNQKLSCVIS 290
>SDS3_HUMAN (Q9H7L9) Sin3 histone deacetylase corepressor complex component| SDS3 (Suppressor of defective silencing 3 protein homolog) Length = 328 Score = 30.0 bits (66), Expect = 3.6 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Frame = +1 Query: 214 TSNRTPHDRQTK*KLR*TNHSAADTSPSRSMNAPSSCP----ESALVAAALAVDRQWNCS 381 T + D +T KL+ A+ +SP P+ P E+ + L D++W Sbjct: 212 TDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK 271 Query: 382 SQATVLESVEHLQVTASLA 438 SQA LES ++ +++ ++ Sbjct: 272 SQAIYLESKDNQKLSCVIS 290
>GSPJ_VIBCH (P45776) General secretion pathway protein J precursor (Cholera| toxin secretion protein epsJ) Length = 221 Score = 29.3 bits (64), Expect = 6.2 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +2 Query: 116 SLMKDEHHGQAFIRGGWHEP 175 SL+ + HG F+R GWH P Sbjct: 95 SLLDSDQHGLLFVRLGWHNP 114
>CAD_DROME (P09085) Homeotic protein caudal| Length = 427 Score = 28.9 bits (63), Expect = 8.1 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Frame = +2 Query: 134 HHGQAFIRGGWHEPASSTAQD-LTNVP--RHQI 223 H A G WH PASSTA + + NVP HQ+ Sbjct: 73 HSAAAASAGEWHSPASSTADNFVQNVPTSAHQL 105 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,266,963 Number of Sequences: 219361 Number of extensions: 1255700 Number of successful extensions: 3557 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3287 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3433 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
