ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal24l09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene) Length = 1196 Score = 1037 bits (523), Expect = 0.0 Identities = 552/560 (98%), Gaps = 2/560 (0%) Strand = Plus / Minus Query: 18 ctcatattncgataggttaattcacagaaacaacacccaggtagcaacgggtatcatcga 77 |||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1189 ctcatatt-cgataggttaattcacagaaacaacacccagg-agcaacggatatcatcga 1132 Query: 78 aagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgtacagcc 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1131 aagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgtacagcc 1072 Query: 138 atctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgca 197 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 atctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgca 1012 Query: 198 gcttgctactttactctgatttcttttcctctcccctccatggggttagcatgttcgcaa 257 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1011 gcttgctgctttactctgatttcttttcctctcccctccatggggttagcatgttcgcaa 952 Query: 258 ccgcatgatacaccaggctggccggtgcaacttgttactcgtactgaatagtacgcttac 317 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 951 ccgcatgatacaccaggctggccgctgcaacttgttactcgtactgaatagtacgcttac 892 Query: 318 atgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtcc 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 891 atgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtcc 832 Query: 378 ggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggt 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 ggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggt 772 Query: 438 gattgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagc 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 gattgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagc 712 Query: 498 tggtttgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaagtt 557 ||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||| Sbjct: 711 tggtttgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaagtt 652 Query: 558 ccttctggagaactttattc 577 |||||||||||||||||||| Sbjct: 651 ccttctggagaactttattc 632
>gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, complete cds Length = 1153 Score = 1023 bits (516), Expect = 0.0 Identities = 529/533 (99%), Gaps = 1/533 (0%) Strand = Plus / Minus Query: 45 aaacaacacccaggtagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctac 104 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 aaacaacacccagg-agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctac 1095 Query: 105 atataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 atataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactg 1035 Query: 165 aggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttctttt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 aggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttctttt 975 Query: 225 cctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 cctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtg 915 Query: 285 caacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttga 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 caacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttga 855 Query: 345 tgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgcca 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 tgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgcca 795 Query: 405 catcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggag 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 catcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggag 735 Query: 465 catccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgct 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 catccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgct 675 Query: 525 gcgccgnctgggccttntgcttntccacaagttccttctggagaactttattc 577 |||||| ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 674 gcgccgcctgggccttctgcttctccacaagttccttctggagaactttattc 622
>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete cds Length = 1145 Score = 1023 bits (516), Expect = 0.0 Identities = 529/533 (99%), Gaps = 1/533 (0%) Strand = Plus / Minus Query: 45 aaacaacacccaggtagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctac 104 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1145 aaacaacacccagg-agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctac 1087 Query: 105 atataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1086 atataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactg 1027 Query: 165 aggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttctttt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1026 aggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttctttt 967 Query: 225 cctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 966 cctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtg 907 Query: 285 caacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttga 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 906 caacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttga 847 Query: 345 tgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgcca 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 tgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgcca 787 Query: 405 catcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggag 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 786 catcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggag 727 Query: 465 catccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgct 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 catccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgct 667 Query: 525 gcgccgnctgggccttntgcttntccacaagttccttctggagaactttattc 577 |||||| ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 666 gcgccgcctgggccttctgcttctccacaagttccttctggagaactttattc 614
>gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA, complete cds Length = 1157 Score = 1015 bits (512), Expect = 0.0 Identities = 528/533 (99%), Gaps = 1/533 (0%) Strand = Plus / Minus Query: 45 aaacaacacccaggtagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctac 104 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1157 aaacaacacccagg-agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctac 1099 Query: 105 atataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1098 atataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactg 1039 Query: 165 aggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttctttt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 aggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttctttt 979 Query: 225 cctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtg 284 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 978 cctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccgctg 919 Query: 285 caacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttga 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 918 caacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttga 859 Query: 345 tgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgcca 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 tgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgcca 799 Query: 405 catcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggag 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 catcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggag 739 Query: 465 catccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgct 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 catccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgct 679 Query: 525 gcgccgnctgggccttntgcttntccacaagttccttctggagaactttattc 577 |||||| ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 678 gcgccgcctgggccttctgcttctccacaagttccttctggagaactttattc 626
>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete cds Length = 1153 Score = 1015 bits (512), Expect = 0.0 Identities = 528/533 (99%), Gaps = 1/533 (0%) Strand = Plus / Minus Query: 45 aaacaacacccaggtagcaacgggtatcatcgaaagttgaaaattcgtcactcatgctac 104 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 aaacaacacccagg-agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctac 1095 Query: 105 atataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactg 164 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 aaataaattacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactg 1035 Query: 165 aggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttctttt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 aggtggacgaagtgaaatatacacattcctgcagcttgctactttactctgatttctttt 975 Query: 225 cctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 cctctcccctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtg 915 Query: 285 caacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttga 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 914 caacttgttactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttga 855 Query: 345 tgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgcca 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 tgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgcactgcca 795 Query: 405 catcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggag 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 catcctctgccctctcgcctgccgccgctgggtgattgctggtatctgcgacagggggag 735 Query: 465 catccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgct 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 catccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgct 675 Query: 525 gcgccgnctgggccttntgcttntccacaagttccttctggagaactttattc 577 |||||| ||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 674 gcgccgcctgggccttctgcttctccacaagttccttctggagaactttattc 622
>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1105 Score = 1009 bits (509), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1098 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1039 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 979 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 919 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 918 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 859 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 799 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 739 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 679 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 678 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 619 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 618 tctgcttctccacaagttccttctggagaactttattc 581
>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1009 bits (509), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1047 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 987 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 927 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 867 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 807 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 747 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 687 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 686 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 627 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 626 tctgcttctccacaagttccttctggagaactttattc 589
>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1009 bits (509), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1047 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 987 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 927 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 867 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 807 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 747 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 687 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 686 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 627 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 626 tctgcttctccacaagttccttctggagaactttattc 589
>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1009 bits (509), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1047 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 987 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 927 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 867 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 807 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 747 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 687 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 686 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 627 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 626 tctgcttctccacaagttccttctggagaactttattc 589
>gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 1009 bits (509), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1051 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 991 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 931 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 871 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 811 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 751 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 691 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 690 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 631 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 630 tctgcttctccacaagttccttctggagaactttattc 593
>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1009 bits (509), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1047 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 987 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 927 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 867 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 807 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 747 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 687 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 686 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 627 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 626 tctgcttctccacaagttccttctggagaactttattc 589
>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1009 bits (509), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1047 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 987 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 927 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 867 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 807 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 747 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 687 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 686 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 627 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 626 tctgcttctccacaagttccttctggagaactttattc 589
>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1009 bits (509), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1047 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 987 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 927 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 867 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 807 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 747 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 687 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 686 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 627 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 626 tctgcttctccacaagttccttctggagaactttattc 589
>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 1009 bits (509), Expect = 0.0 Identities = 515/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1047 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 987 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 927 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 926 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 867 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 866 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 807 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 747 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 687 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 686 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 627 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 626 tctgcttctccacaagttccttctggagaactttattc 589
>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 1001 bits (505), Expect = 0.0 Identities = 514/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1051 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 991 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 931 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 930 gggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactcgt 871 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 811 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 751 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 691 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 690 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 631 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 630 tctgcttctccacaagttccttctggagaactttattc 593
>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 1001 bits (505), Expect = 0.0 Identities = 514/518 (99%) Strand = Plus / Minus Query: 60 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 agcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatgg 1051 Query: 120 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 tagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtga 991 Query: 180 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 aatatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatg 931 Query: 240 gggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgt 299 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 930 gggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactcgt 871 Query: 300 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 actgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcc 811 Query: 360 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 acagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctct 751 Query: 420 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 cgcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatga 691 Query: 480 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcct 539 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 690 aggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctgggcct 631 Query: 540 tntgcttntccacaagttccttctggagaactttattc 577 | ||||| |||||||||||||||||||||||||||||| Sbjct: 630 tctgcttctccacaagttccttctggagaactttattc 593
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1151 Score = 973 bits (491), Expect = 0.0 Identities = 500/504 (99%) Strand = Plus / Minus Query: 74 tcgaaagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgtac 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1129 tcgaaagttgaaaattcgtcactcatgctacatataaattacatggtagattactcgtac 1070 Query: 134 agccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcc 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1069 agccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcc 1010 Query: 194 tgcagcttgctactttactctgatttcttttcctctcccctccatggggttagcatgttc 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1009 tgcagcttgctactttactctgatttcttttcctctcccctccatggggttagcatgttc 950 Query: 254 gcaaccgcatgatacaccaggctggccggtgcaacttgttactcgtactgaatagtacgc 313 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 949 gcaaccgcatgatacaccaggctggccgctgcaacttgttactcgtactgaatagtacgc 890 Query: 314 ttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgcc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 ttacatgggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgcc 830 Query: 374 gtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgct 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 gtccggagtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgct 770 Query: 434 gggtgattgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaa 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 gggtgattgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaa 710 Query: 494 gagctggtttgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccaca 553 ||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||| Sbjct: 709 gagctggtttgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccaca 650 Query: 554 agttccttctggagaactttattc 577 |||||||||||||||||||||||| Sbjct: 649 agttccttctggagaactttattc 626
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 827 bits (417), Expect = 0.0 Identities = 441/445 (99%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 1 cacaatatacacaacgnctcatattncgataggttaattcacagaaacaacacccaggta 60 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 11263 cacaatatacacaacg-ctcatatt-cgataggttaattcacagaaacaacacccagg-a 11207 Query: 61 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11206 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 11147 Query: 121 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11146 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 11087 Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11086 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 11027 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 11026 ggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactcgta 10967 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10966 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 10907 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10906 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 10847 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 10846 gcctgccgccgctgggtgattgctg 10822 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10574 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 10515 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 10514 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 10462 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 10372 ttccttctggagaactttattc 10351
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 827 bits (417), Expect = 0.0 Identities = 441/445 (99%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 1 cacaatatacacaacgnctcatattncgataggttaattcacagaaacaacacccaggta 60 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 62984 cacaatatacacaacg-ctcatatt-cgataggttaattcacagaaacaacacccagg-a 62928 Query: 61 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62927 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 62868 Query: 121 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62867 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 62808 Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62807 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 62748 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 62747 ggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactcgta 62688 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62687 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 62628 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62627 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 62568 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 62567 gcctgccgccgctgggtgattgctg 62543 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62295 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 62236 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 62235 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 62183 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 62093 ttccttctggagaactttattc 62072
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 827 bits (417), Expect = 0.0 Identities = 441/445 (99%), Gaps = 3/445 (0%) Strand = Plus / Minus Query: 1 cacaatatacacaacgnctcatattncgataggttaattcacagaaacaacacccaggta 60 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| | Sbjct: 12033 cacaatatacacaacg-ctcatatt-cgataggttaattcacagaaacaacacccagg-a 11977 Query: 61 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11976 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 11917 Query: 121 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11916 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 11857 Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11856 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 11797 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 11796 ggttagcatgttcgcaaccgcatgatacaccaggctggccgctgcaacttgttactcgta 11737 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11736 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 11677 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11676 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 11617 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 11616 gcctgccgccgctgggtgattgctg 11592 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11344 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 11285 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 11284 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 11232 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 11142 ttccttctggagaactttattc 11121
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 815 bits (411), Expect = 0.0 Identities = 418/419 (99%), Gaps = 1/419 (0%) Strand = Plus / Minus Query: 27 cgataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaa 86 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 17220 cgataggttaattcacagaaacaacacccagg-agcaacgggtatcatcgaaagttgaaa 17162 Query: 87 attcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagcc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17161 attcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagcc 17102 Query: 147 caggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctac 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17101 caggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctac 17042 Query: 207 tttactctgatttcttttcctctcccctccatggggttagcatgttcgcaaccgcatgat 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17041 tttactctgatttcttttcctctcccctccatggggttagcatgttcgcaaccgcatgat 16982 Query: 267 acaccaggctggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctgg 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16981 acaccaggctggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctgg 16922 Query: 327 aagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtggga 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16921 aagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtggga 16862 Query: 387 cctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16861 cctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 16803 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16555 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 16496 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 16495 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 16443 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 16353 ttccttctggagaactttattc 16332
>emb|AJ577374.1|TAE577374 Triticum aestivum partial mRNA for putative MADS-box transcription factor (mads#11 gene) Length = 770 Score = 611 bits (308), Expect = e-171 Identities = 467/517 (90%), Gaps = 3/517 (0%) Strand = Plus / Minus Query: 64 acgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggtaga 123 ||||||||||| |||| |||||||||| ||||||| |||||||||| ||||||||||| | Sbjct: 750 acgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggtaaa 691 Query: 124 ttactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaaata 183 |||||||||||||||||||||||||| ||| | |||||||||||||||| ||| |||||| Sbjct: 690 ttactcgtacagccatctcagcccagctgggagggaaactgaggtggacaaagcgaaata 631 Query: 184 tacacattcctgcagcttgctactttactctgatttcttttcctctcccctccat-gggg 242 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct: 630 tacacatcgctgcagcttgctactttactctgatttcttttcctttcccctccaaagggg 571 Query: 243 ttag-catgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcg-ta 300 | || | || | ||||||||| ||||||||||||||||||||||||||||||| | || Sbjct: 570 tcaggcgtgctagcaaccgcaacatacaccaggctggccggtgcaacttgttaccctcta 511 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 ||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 510 ctgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatcca 451 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 | |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||||| Sbjct: 450 cggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctctc 391 Query: 421 gcctgccgccgctgggtgattgctggtatctgcgacagggggagcatccctcatcatgaa 480 ||||| |||||||| ||| ||||||||| |||| |||||||||||||||||| |||||| Sbjct: 390 gcctgttgccgctggatgaatgctggtatttgcggcagggggagcatccctcagcatgaa 331 Query: 481 ggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctgggcctt 540 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 330 ggaagaagatgaagagctggtttgaggctgagtttgatcttgctgcgccgcatgggcctt 271 Query: 541 ntgcttntccacaagttccttctggagaactttattc 577 ||||| ||||| |||||||||||||||||||||||| Sbjct: 270 ctgcttctccacgagttccttctggagaactttattc 234
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 573 bits (289), Expect = e-160 Identities = 322/333 (96%) Strand = Plus / Minus Query: 113 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 172 ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3791 tacatggtaatttactcgtacagccatctcagcccaggtggaaaggaaactgaagtggac 3732 Query: 173 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 232 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3731 gaagtgaaatatacacattgctgcagcttgctactttactctgatttcttttcctctccc 3672 Query: 233 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 292 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3671 ctccatggggttagcgtgttcgcaaccgcatgatacaccagtctggccggtgcaacttgt 3612 Query: 293 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3611 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 3552 Query: 353 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 412 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3551 accatccacagtggaagcgccgtccggagtgggatctgaggctgcactgccacatcctct 3492 Query: 413 gccctctcgcctgccgccgctgggtgattgctg 445 |||||| ||||| |||||||||||| |||||| Sbjct: 3491 gccctcacgcctatcgccgctgggtgtttgctg 3459 Score = 190 bits (96), Expect = 3e-45 Identities = 108/113 (95%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3292 ctggtatctgcggcagggggagcatccctcaacatgaaggaagaagaagaagagctggtt 3233 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 3232 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 3180 Score = 143 bits (72), Expect = 7e-31 Identities = 85/88 (96%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| Sbjct: 3969 gataggttaattcacagaaacaacacccagg-agctacgggtatcatggaaagttgaaaa 3911 Query: 88 ttcgtcactcatgctacatataaattac 115 |||||||||||||||||||||||||||| Sbjct: 3910 ttcgtcactcatgctacatataaattac 3883 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 3090 ttccttctggagaactttattc 3069
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 573 bits (289), Expect = e-160 Identities = 322/333 (96%) Strand = Plus / Minus Query: 113 tacatggtagattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggac 172 ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3839 tacatggtaatttactcgtacagccatctcagcccaggtggaaaggaaactgaagtggac 3780 Query: 173 gaagtgaaatatacacattcctgcagcttgctactttactctgatttcttttcctctccc 232 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3779 gaagtgaaatatacacattgctgcagcttgctactttactctgatttcttttcctctccc 3720 Query: 233 ctccatggggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgt 292 ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 3719 ctccatggggttagcgtgttcgcaaccgcatgatacaccagtctggccggtgcaacttgt 3660 Query: 293 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3659 tactcgtactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctc 3600 Query: 353 accatccacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctct 412 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 3599 accatccacagtggaagcgccgtccggagtgggatctgaggctgcactgccacatcctct 3540 Query: 413 gccctctcgcctgccgccgctgggtgattgctg 445 |||||| ||||| |||||||||||| |||||| Sbjct: 3539 gccctcacgcctatcgccgctgggtgtttgctg 3507 Score = 190 bits (96), Expect = 3e-45 Identities = 108/113 (95%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3340 ctggtatctgcggcagggggagcatccctcaacatgaaggaagaagaagaagagctggtt 3281 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 3280 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 3228 Score = 145 bits (73), Expect = 2e-31 Identities = 86/89 (96%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 27 cgataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaa 86 |||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| Sbjct: 4018 cgataggttaattcacagaaacaacacccagg-agctacgggtatcatggaaagttgaaa 3960 Query: 87 attcgtcactcatgctacatataaattac 115 ||||||||||||||||||||||||||||| Sbjct: 3959 attcgtcactcatgctacatataaattac 3931 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 3138 ttccttctggagaactttattc 3117
>dbj|AB007504.1| Triticum aestivum TaMADS#11 mRNA for MADS box transcription factor, complete cds Length = 1161 Score = 555 bits (280), Expect = e-155 Identities = 399/437 (91%), Gaps = 2/437 (0%) Strand = Plus / Minus Query: 143 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 202 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 1002 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 943 Query: 203 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 261 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 942 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 883 Query: 262 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 320 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 882 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 823 Query: 321 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 380 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 822 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 763 Query: 381 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 440 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 762 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 703 Query: 441 tgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctgg 500 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 702 tgctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttg 643 Query: 501 tttgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaagttcct 560 ||||||||||||| |||||||| ||||||| ||||||||| ||||| || || ||||||| Sbjct: 642 tttgaggctgagtctgatcttgttgcgccgcctgggccttctgcttctcgacgagttcct 583 Query: 561 tctggagaactttattc 577 ||||||||||||||||| Sbjct: 582 tctggagaactttattc 566 Score = 99.6 bits (50), Expect = 1e-17 Identities = 105/121 (86%), Gaps = 2/121 (1%) Strand = Plus / Minus Query: 1 cacaatatacacaacgnctcatattncgataggttaattcacagaaacaacacccaggta 60 |||||||||||||| | |||||||| |||||||||||||||| |||||||| || || Sbjct: 1126 cacaatatacacaatg-ctcatattt-gataggttaattcacataaacaacatcccacta 1069 Query: 61 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 120 | ||||||||||| |||| |||||||||| ||||||| |||||||||| |||||||||| Sbjct: 1068 gagacgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggt 1009 Query: 121 a 121 | Sbjct: 1008 a 1008
>gb|AY280870.1| Triticum aestivum MADS-box protein TaVRT-1 mRNA, complete cds Length = 1210 Score = 547 bits (276), Expect = e-152 Identities = 398/437 (91%), Gaps = 2/437 (0%) Strand = Plus / Minus Query: 143 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 202 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1077 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 1018 Query: 203 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 261 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 1017 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 958 Query: 262 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 320 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 957 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 898 Query: 321 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 380 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 897 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 838 Query: 381 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 440 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 837 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 778 Query: 441 tgctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctgg 500 |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 777 tgctggtagttgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttg 718 Query: 501 tttgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaagttcct 560 ||||||||||||| |||||||| ||||||| ||||||||| ||||| || || ||||||| Sbjct: 717 tttgaggctgagtctgatcttgttgcgccgcctgggccttctgcttctcgacgagttcct 658 Query: 561 tctggagaactttattc 577 ||||||||||||||||| Sbjct: 657 tctggagaactttattc 641 Score = 91.7 bits (46), Expect = 2e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| ||||||||||| | | | ||||||||||| |||| ||||||| Sbjct: 1175 gataggttaattcacataaacaacaccc-gctcgagacgggtatcatggaaacttgaaaa 1117 Query: 88 ttcgtcactcatgctacatataaattacatggta 121 ||| ||||||| |||||||||| ||||||||||| Sbjct: 1116 ttcatcactcaagctacatatagattacatggta 1083
>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box transcription factor (Vrn1) gene, partial cds Length = 1214 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1155 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1095 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1035 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1034 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 975 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 974 gcctgccgccgctgggtgattgctg 950 Score = 143 bits (72), Expect = 7e-31 Identities = 78/81 (96%) Strand = Plus / Minus Query: 475 catgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgnctg 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 717 catgaaggaagaagaagaagagctggtttgaggctgagtttgatcttgctgcgccgcctg 658 Query: 535 ggccttntgcttntccacaag 555 |||||| ||||| |||||||| Sbjct: 657 ggccttctgcttctccacaag 637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattc 526
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattc 525
>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattc 526
>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattc 526
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattc 526
>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattc 526
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattc 525
>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1200 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1140 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1080 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1020 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1019 gcctgccgccgctgggtgattgctg 995 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattc 526
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattc 525
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattc 526
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box transcription factor (Vrn1) gene, partial cds Length = 1261 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1202 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1201 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1142 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1141 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1082 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1081 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1022 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1021 gcctgccgccgctgggtgattgctg 997 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattc 526
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box transcription factor (Vrn1) gene, partial cds Length = 1259 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1200 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1140 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1139 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1080 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1020 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1019 gcctgccgccgctgggtgattgctg 995 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 690 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 689 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 637 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 547 ttccttctggagaactttattc 526
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattc 525
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box transcription factor (Vrn1) gene, partial cds Length = 1260 Score = 525 bits (265), Expect = e-146 Identities = 265/265 (100%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1260 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1201 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1200 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1141 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1140 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1081 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1080 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1021 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1020 gcctgccgccgctgggtgattgctg 996 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 689 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 688 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 636 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 546 ttccttctggagaactttattc 525
>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattc 527
>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattc 527
>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattc 527
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattc 527
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box transcription factor (Vrn1) gene, partial cds Length = 1262 Score = 517 bits (261), Expect = e-143 Identities = 264/265 (99%) Strand = Plus / Minus Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1262 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 1203 Query: 241 ggttagcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 300 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1202 ggttagcgtgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactcgta 1143 Query: 301 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1142 ctgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatcca 1083 Query: 361 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1082 cagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctctc 1023 Query: 421 gcctgccgccgctgggtgattgctg 445 ||||||||||||||||||||||||| Sbjct: 1022 gcctgccgccgctgggtgattgctg 998 Score = 206 bits (104), Expect = 6e-50 Identities = 110/113 (97%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 691 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccacaag 555 |||||||||||||||||||||||||||| ||||||||| ||||| |||||||| Sbjct: 690 tgaggctgagtttgatcttgctgcgccgcctgggccttctgcttctccacaag 638 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 548 ttccttctggagaactttattc 527
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 468 bits (236), Expect = e-128 Identities = 399/447 (89%), Gaps = 5/447 (1%) Strand = Plus / Minus Query: 1 cacaatatacacaacgnctcatattncgataggttaattcacagaaacaacacccaggta 60 |||||||||||||| | |||||| | |||||||||||||||| |||||||||||| ||| Sbjct: 15838 cacaatatacacaatg-ctcatagtt-gataggttaattcacataaacaacaccca-gta 15782 Query: 61 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 120 | ||||||||||| |||| |||||||||| ||||||| |||||||||| |||||||||| Sbjct: 15781 gagacgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggt 15722 Query: 121 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 180 | ||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||| Sbjct: 15721 aaattactcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaa 15662 Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| || Sbjct: 15661 atatacacatcgctgcagcttgctactttactctgatttcttttccttttccctccaagg 15602 Query: 241 ggtta-gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-g 298 ||| | || || | ||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 15601 ggtcaggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctc 15542 Query: 299 tactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatc 358 ||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||| Sbjct: 15541 tactgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatc 15482 Query: 359 cacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctc 418 ||| |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 15481 cacggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctc 15422 Query: 419 tcgcctgccgccgctgggtgattgctg 445 ||||||||||||||||| ||| ||||| Sbjct: 15421 tcgcctgccgccgctggatgaatgctg 15395 Score = 168 bits (85), Expect = 1e-38 Identities = 103/110 (93%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 15230 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagaagaagagctggtt 15171 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccac 552 |||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 15170 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 15121 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 15025 ttccttctggagaactttattc 15004
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 468 bits (236), Expect = e-128 Identities = 399/447 (89%), Gaps = 5/447 (1%) Strand = Plus / Minus Query: 1 cacaatatacacaacgnctcatattncgataggttaattcacagaaacaacacccaggta 60 |||||||||||||| | |||||| | |||||||||||||||| |||||||||||| ||| Sbjct: 15302 cacaatatacacaatg-ctcatagtt-gataggttaattcacataaacaacaccca-gta 15246 Query: 61 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 120 | ||||||||||| |||| |||||||||| ||||||| |||||||||| |||||||||| Sbjct: 15245 gagacgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggt 15186 Query: 121 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 180 | ||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||| Sbjct: 15185 aaattactcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaa 15126 Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| || Sbjct: 15125 atatacacatcgctgcagcttgctactttactctgatttcttttccttttccctccaagg 15066 Query: 241 ggtta-gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-g 298 ||| | || || | ||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 15065 ggtcaggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctc 15006 Query: 299 tactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatc 358 ||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||| Sbjct: 15005 tactgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatc 14946 Query: 359 cacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctc 418 ||| |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 14945 cacggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctc 14886 Query: 419 tcgcctgccgccgctgggtgattgctg 445 ||||||||||||||||| ||| ||||| Sbjct: 14885 tcgcctgccgccgctggatgaatgctg 14859 Score = 168 bits (85), Expect = 1e-38 Identities = 103/110 (93%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 14694 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagaagaagagctggtt 14635 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccac 552 |||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 14634 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 14585 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 14489 ttccttctggagaactttattc 14468
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 468 bits (236), Expect = e-128 Identities = 399/447 (89%), Gaps = 5/447 (1%) Strand = Plus / Minus Query: 1 cacaatatacacaacgnctcatattncgataggttaattcacagaaacaacacccaggta 60 |||||||||||||| | |||||| | |||||||||||||||| |||||||||||| ||| Sbjct: 15823 cacaatatacacaatg-ctcatagtt-gataggttaattcacataaacaacaccca-gta 15767 Query: 61 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 120 | ||||||||||| |||| |||||||||| ||||||| |||||||||| |||||||||| Sbjct: 15766 gagacgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggt 15707 Query: 121 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 180 | ||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||| Sbjct: 15706 aaattactcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaa 15647 Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| || Sbjct: 15646 atatacacatcgctgcagcttgctactttactctgatttcttttccttttccctccaagg 15587 Query: 241 ggtta-gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-g 298 ||| | || || | ||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 15586 ggtcaggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctc 15527 Query: 299 tactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatc 358 ||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||| Sbjct: 15526 tactgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatc 15467 Query: 359 cacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctc 418 ||| |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 15466 cacggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctc 15407 Query: 419 tcgcctgccgccgctgggtgattgctg 445 ||||||||||||||||| ||| ||||| Sbjct: 15406 tcgcctgccgccgctggatgaatgctg 15380 Score = 168 bits (85), Expect = 1e-38 Identities = 103/110 (93%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 15215 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagaagaagagctggtt 15156 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccac 552 |||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 15155 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 15106 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 15010 ttccttctggagaactttattc 14989
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 468 bits (236), Expect = e-128 Identities = 399/447 (89%), Gaps = 5/447 (1%) Strand = Plus / Minus Query: 1 cacaatatacacaacgnctcatattncgataggttaattcacagaaacaacacccaggta 60 |||||||||||||| | |||||| | |||||||||||||||| |||||||||||| ||| Sbjct: 82374 cacaatatacacaatg-ctcatagtt-gataggttaattcacataaacaacaccca-gta 82318 Query: 61 gcaacgggtatcatcgaaagttgaaaattcgtcactcatgctacatataaattacatggt 120 | ||||||||||| |||| |||||||||| ||||||| |||||||||| |||||||||| Sbjct: 82317 gagacgggtatcatggaaacttgaaaattcatcactcaagctacatatagattacatggt 82258 Query: 121 agattactcgtacagccatctcagcccaggtggaaaggaaactgaggtggacgaagtgaa 180 | ||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||| Sbjct: 82257 aaattactcgtacagccatctcagcccagctgggagggaaactgaggtggaccaagtgaa 82198 Query: 181 atatacacattcctgcagcttgctactttactctgatttcttttcctctcccctccatgg 240 |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| || Sbjct: 82197 atatacacatcgctgcagcttgctactttactctgatttcttttccttttccctccaagg 82138 Query: 241 ggtta-gcatgttcgcaaccgcatgatacaccaggctggccggtgcaacttgttactc-g 298 ||| | || || | ||||||||| ||||||| ||||||||||||||||||||||| | Sbjct: 82137 ggtcaggcgtgctagcaaccgcaacatacaccgggctggccggtgcaacttgttaccctc 82078 Query: 299 tactgaatagtacgcttacatgggctggaagcccttcagccgttgatgtggctcaccatc 358 ||||||||||||||| | |||||||||| |||||||| ||||||||||||||||||||| Sbjct: 82077 tactgaatagtacgcctgtatgggctggatgcccttcacccgttgatgtggctcaccatc 82018 Query: 359 cacagtggaagcgccgtccggagtgggacctgaggctgcactgccacatcctctgccctc 418 ||| |||||||| |||||||| ||||| |||| |||||||||||| |||||||||||||| Sbjct: 82017 cacggtggaagccccgtccggggtggggcctgcggctgcactgccgcatcctctgccctc 81958 Query: 419 tcgcctgccgccgctgggtgattgctg 445 ||||||||||||||||| ||| ||||| Sbjct: 81957 tcgcctgccgccgctggatgaatgctg 81931 Score = 168 bits (85), Expect = 1e-38 Identities = 103/110 (93%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 ||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 81766 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagaagaagagctggtt 81707 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccac 552 |||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 81706 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 81657 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 81561 ttccttctggagaactttattc 81540
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 454 bits (229), Expect = e-124 Identities = 377/421 (89%), Gaps = 4/421 (0%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| ||||||||||||| ||| ||||||||||| |||| ||||||| Sbjct: 12460 gataggttaattcacataaacaacacccag-tagagacgggtatcatggaaacttgaaaa 12402 Query: 88 ttcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccc 147 ||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 12401 ttcatcactcaagctacatatagattacatggtaaattactcgtacagccatctcagccc 12342 Query: 148 aggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctact 207 || ||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 12341 agctgggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctact 12282 Query: 208 ttactctgatttcttttcctctcccctcc-atggggtta-gcatgttcgcaaccgcatga 265 |||||||||||||||||||| |||||||| | ||||| | || || | ||||||||| | Sbjct: 12281 ttactctgatttcttttcctttcccctccaaaggggtcaggcgtgctagcaaccgcaaca 12222 Query: 266 tacaccaggctggccggtgcaacttgttactc-gtactgaatagtacgcttacatgggct 324 |||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||| Sbjct: 12221 tacaccaggctggccggtgcaacttgttaccctctactgaatagtacgcctgtatgggct 12162 Query: 325 ggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgg 384 ||| |||||||| |||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 12161 ggatgcccttcacccgttgatgtggctcaccatccacggtggaagccccgtccggggtgg 12102 Query: 385 gacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgct 444 | |||| |||||||||||| ||||||||||||||||||||| |||||||| ||| |||| Sbjct: 12101 ggcctgcggctgcactgccgcatcctctgccctctcgcctgttgccgctggatgaatgct 12042 Query: 445 g 445 | Sbjct: 12041 g 12041 Score = 161 bits (81), Expect = 3e-36 Identities = 102/110 (92%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 11878 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 11819 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccac 552 |||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 11818 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 11769 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 11673 ttccttctggagaactttattc 11652
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 454 bits (229), Expect = e-124 Identities = 377/421 (89%), Gaps = 4/421 (0%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| ||||||||||||| ||| ||||||||||| |||| ||||||| Sbjct: 12229 gataggttaattcacataaacaacacccag-tagagacgggtatcatggaaacttgaaaa 12171 Query: 88 ttcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccc 147 ||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 12170 ttcatcactcaagctacatatagattacatggtaaattactcgtacagccatctcagccc 12111 Query: 148 aggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctact 207 || ||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 12110 agctgggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctact 12051 Query: 208 ttactctgatttcttttcctctcccctcc-atggggtta-gcatgttcgcaaccgcatga 265 |||||||||||||||||||| |||||||| | ||||| | || || | ||||||||| | Sbjct: 12050 ttactctgatttcttttcctttcccctccaaaggggtcaggcgtgctagcaaccgcaaca 11991 Query: 266 tacaccaggctggccggtgcaacttgttactc-gtactgaatagtacgcttacatgggct 324 |||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||| Sbjct: 11990 tacaccaggctggccggtgcaacttgttaccctctactgaatagtacgcctgtatgggct 11931 Query: 325 ggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgg 384 ||| |||||||| |||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 11930 ggatgcccttcacccgttgatgtggctcaccatccacggtggaagccccgtccggggtgg 11871 Query: 385 gacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgct 444 | |||| |||||||||||| ||||||||||||||||||||| |||||||| ||| |||| Sbjct: 11870 ggcctgcggctgcactgccgcatcctctgccctctcgcctgttgccgctggatgaatgct 11811 Query: 445 g 445 | Sbjct: 11810 g 11810 Score = 161 bits (81), Expect = 3e-36 Identities = 102/110 (92%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 11647 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 11588 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccac 552 |||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 11587 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 11538 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 11442 ttccttctggagaactttattc 11421
>gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN-A1) gene, complete cds; and gypsy retrotransposon Sukkula, complete sequence Length = 6730 Score = 454 bits (229), Expect = e-124 Identities = 377/421 (89%), Gaps = 4/421 (0%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| ||||||||||||| ||| ||||||||||| |||| ||||||| Sbjct: 6726 gataggttaattcacataaacaacacccag-tagagacgggtatcatggaaacttgaaaa 6668 Query: 88 ttcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccc 147 ||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 6667 ttcatcactcaagctacatatagattacatggtaaattactcgtacagccatctcagccc 6608 Query: 148 aggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctact 207 || ||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 6607 agctgggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctact 6548 Query: 208 ttactctgatttcttttcctctcccctcc-atggggtta-gcatgttcgcaaccgcatga 265 |||||||||||||||||||| |||||||| | ||||| | || || | ||||||||| | Sbjct: 6547 ttactctgatttcttttcctttcccctccaaaggggtcaggcgtgctagcaaccgcaaca 6488 Query: 266 tacaccaggctggccggtgcaacttgttactc-gtactgaatagtacgcttacatgggct 324 |||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||| Sbjct: 6487 tacaccaggctggccggtgcaacttgttaccctctactgaatagtacgcctgtatgggct 6428 Query: 325 ggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgg 384 ||| |||||||| |||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 6427 ggatgcccttcacccgttgatgtggctcaccatccacggtggaagccccgtccggggtgg 6368 Query: 385 gacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgct 444 | |||| |||||||||||| ||||||||||||||||||||| |||||||| ||| |||| Sbjct: 6367 ggcctgcggctgcactgccgcatcctctgccctctcgcctgttgccgctggatgaatgct 6308 Query: 445 g 445 | Sbjct: 6307 g 6307 Score = 153 bits (77), Expect = 8e-34 Identities = 101/110 (91%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 6144 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 6085 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccac 552 ||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 6084 tgaggctgagtttgatcttgctgcgccacatgggccttctgcttctccac 6035 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 5940 ttccttctggagaactttattc 5919
>gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256C17 VRN-A1 (VRN-A1) gene, complete cds Length = 5065 Score = 454 bits (229), Expect = e-124 Identities = 377/421 (89%), Gaps = 4/421 (0%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| ||||||||||||| ||| ||||||||||| |||| ||||||| Sbjct: 5061 gataggttaattcacataaacaacacccag-tagagacgggtatcatggaaacttgaaaa 5003 Query: 88 ttcgtcactcatgctacatataaattacatggtagattactcgtacagccatctcagccc 147 ||| ||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 5002 ttcatcactcaagctacatatagattacatggtaaattactcgtacagccatctcagccc 4943 Query: 148 aggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttgctact 207 || ||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 4942 agctgggagggaaactgaggtggacaaagtgaaatatacacatcgctgcagcttgctact 4883 Query: 208 ttactctgatttcttttcctctcccctcc-atggggtta-gcatgttcgcaaccgcatga 265 |||||||||||||||||||| |||||||| | ||||| | || || | ||||||||| | Sbjct: 4882 ttactctgatttcttttcctttcccctccaaaggggtcaggcgtgctagcaaccgcaaca 4823 Query: 266 tacaccaggctggccggtgcaacttgttactc-gtactgaatagtacgcttacatgggct 324 |||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||| Sbjct: 4822 tacaccaggctggccggtgcaacttgttaccctctactgaatagtacgcctgtatgggct 4763 Query: 325 ggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgg 384 ||| |||||||| |||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 4762 ggatgcccttcacccgttgatgtggctcaccatccacggtggaagccccgtccggggtgg 4703 Query: 385 gacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgct 444 | |||| |||||||||||| ||||||||||||||||||||| |||||||| ||| |||| Sbjct: 4702 ggcctgcggctgcactgccgcatcctctgccctctcgcctgttgccgctggatgaatgct 4643 Query: 445 g 445 | Sbjct: 4642 g 4642 Score = 161 bits (81), Expect = 3e-36 Identities = 102/110 (92%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 4479 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 4420 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccac 552 |||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 4419 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 4370 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 4274 ttccttctggagaactttattc 4253
>gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN-D1 (VRN-D1) gene, complete cds Length = 12335 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 143 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 202 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 12232 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 12173 Query: 203 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 261 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 12172 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 12113 Query: 262 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 320 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12112 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 12053 Query: 321 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 380 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12052 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 11993 Query: 381 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 440 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 11992 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 11933 Query: 441 tgctg 445 ||||| Sbjct: 11932 tgctg 11928 Score = 155 bits (78), Expect = 2e-34 Identities = 97/104 (93%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11763 ctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtt 11704 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgctt 546 ||||||||||| |||||||| ||||||| ||||||||| ||||| Sbjct: 11703 tgaggctgagtctgatcttgttgcgccgcctgggccttctgctt 11660 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| |||||||| || ||| ||||||||||| |||| ||||||| Sbjct: 12331 gataggttaattcacataaacaacatcccactagagacgggtatcatggaaacttgaaaa 12272 Query: 88 ttcgtcactcatgctacatataaattacatggta 121 ||| ||||||| |||||||||| ||||||||||| Sbjct: 12271 ttcatcactcaagctacatatagattacatggta 12238 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 11560 ttccttctggagaactttattc 11539
>gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, complete cds Length = 12224 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 143 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 202 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 12121 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 12062 Query: 203 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 261 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 12061 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 12002 Query: 262 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 320 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12001 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 11942 Query: 321 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 380 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 11941 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 11882 Query: 381 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 440 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 11881 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 11822 Query: 441 tgctg 445 ||||| Sbjct: 11821 tgctg 11817 Score = 155 bits (78), Expect = 2e-34 Identities = 97/104 (93%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11652 ctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtt 11593 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgctt 546 ||||||||||| |||||||| ||||||| ||||||||| ||||| Sbjct: 11592 tgaggctgagtctgatcttgttgcgccgcctgggccttctgctt 11549 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| |||||||| || ||| ||||||||||| |||| ||||||| Sbjct: 12220 gataggttaattcacataaacaacatcccactagagacgggtatcatggaaacttgaaaa 12161 Query: 88 ttcgtcactcatgctacatataaattacatggta 121 ||| ||||||| |||||||||| ||||||||||| Sbjct: 12160 ttcatcactcaagctacatatagattacatggta 12127 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 11449 ttccttctggagaactttattc 11428
>gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 143 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 202 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 13039 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 12980 Query: 203 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 261 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 12979 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 12920 Query: 262 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 320 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12919 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 12860 Query: 321 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 380 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 12859 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 12800 Query: 381 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 440 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 12799 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 12740 Query: 441 tgctg 445 ||||| Sbjct: 12739 tgctg 12735 Score = 147 bits (74), Expect = 5e-32 Identities = 90/96 (93%) Strand = Plus / Minus Query: 451 tgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctg 510 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 12562 tgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtttgaggctg 12503 Query: 511 agtttgatcttgctgcgccgnctgggccttntgctt 546 ||| |||||||| ||||||| ||||||||| ||||| Sbjct: 12502 agtctgatcttgttgcgccgcctgggccttctgctt 12467 Score = 91.7 bits (46), Expect = 2e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| ||||||||||| | | | ||||||||||| |||| ||||||| Sbjct: 13137 gataggttaattcacataaacaacaccc-gctcgagacgggtatcatggaaacttgaaaa 13079 Query: 88 ttcgtcactcatgctacatataaattacatggta 121 ||| ||||||| |||||||||| ||||||||||| Sbjct: 13078 ttcatcactcaagctacatatagattacatggta 13045 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 12367 ttccttctggagaactttattc 12346
>gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN-B1 (VRN-B1) gene, complete cds Length = 6297 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 143 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 202 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 6195 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 6136 Query: 203 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 261 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 6135 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 6076 Query: 262 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 320 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 6075 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 6016 Query: 321 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 380 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 6015 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 5956 Query: 381 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 440 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 5955 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 5896 Query: 441 tgctg 445 ||||| Sbjct: 5895 tgctg 5891 Score = 147 bits (74), Expect = 5e-32 Identities = 90/96 (93%) Strand = Plus / Minus Query: 451 tgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctg 510 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5718 tgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtttgaggctg 5659 Query: 511 agtttgatcttgctgcgccgnctgggccttntgctt 546 ||| |||||||| ||||||| ||||||||| ||||| Sbjct: 5658 agtctgatcttgttgcgccgcctgggccttctgctt 5623 Score = 91.7 bits (46), Expect = 2e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| ||||||||||| | | | ||||||||||| |||| ||||||| Sbjct: 6293 gataggttaattcacataaacaacaccc-gctcgagacgggtatcatggaaacttgaaaa 6235 Query: 88 ttcgtcactcatgctacatataaattacatggta 121 ||| ||||||| |||||||||| ||||||||||| Sbjct: 6234 ttcatcactcaagctacatatagattacatggta 6201 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 5523 ttccttctggagaactttattc 5502
>gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225D16 VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 143 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 202 ||||||| ||| | |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 13039 agcccagctgggagggaaactgaggtggacaaagtgaaatatacacatcactgcagcttg 12980 Query: 203 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 261 ||||||||||||||||||||||||| ||||||||| ||||| || |||| | |||||||| Sbjct: 12979 ctactttactctgatttcttttcctttcccctccaaggggtcaggcatgctagcaaccgc 12920 Query: 262 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 320 | ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 12919 aacatacaccaggctggccggtgcaacttgttactctctactgaatagtacgcttatatg 12860 Query: 321 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 380 ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 12859 ggctggaagcccttcagccgttgatgtggctaaccatccacagtggaagccccgtccggg 12800 Query: 381 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 440 ||||| |||| |||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct: 12799 gtggggcctgcggctgcactgccgcatcctctgccctctctcctgatgccgctggatgaa 12740 Query: 441 tgctg 445 ||||| Sbjct: 12739 tgctg 12735 Score = 147 bits (74), Expect = 5e-32 Identities = 90/96 (93%) Strand = Plus / Minus Query: 451 tgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctg 510 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 12562 tgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtttgaggctg 12503 Query: 511 agtttgatcttgctgcgccgnctgggccttntgctt 546 ||| |||||||| ||||||| ||||||||| ||||| Sbjct: 12502 agtctgatcttgttgcgccgcctgggccttctgctt 12467 Score = 91.7 bits (46), Expect = 2e-15 Identities = 83/94 (88%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| ||||||||||| | | | ||||||||||| |||| ||||||| Sbjct: 13137 gataggttaattcacataaacaacaccc-gctcgagacgggtatcatggaaacttgaaaa 13079 Query: 88 ttcgtcactcatgctacatataaattacatggta 121 ||| ||||||| |||||||||| ||||||||||| Sbjct: 13078 ttcatcactcaagctacatatagattacatggta 13045 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 12367 ttccttctggagaactttattc 12346
>gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN-D1 (VRN-D1) gene, complete cds Length = 8100 Score = 367 bits (185), Expect = 3e-98 Identities = 277/305 (90%), Gaps = 2/305 (0%) Strand = Plus / Minus Query: 143 agcccaggtggaaaggaaactgaggtggacgaagtgaaatatacacattcctgcagcttg 202 ||||||| ||| | |||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 7997 agcccagctgggagggaaactggggtggacaaagtgaaatatacacatcgctgcagcttg 7938 Query: 203 ctactttactctgatttcttttcctctcccctccatggggttag-catgttcgcaaccgc 261 ||||||||||||||||||||||||| ||||||||| ||||| || | || | |||||||| Sbjct: 7937 ctactttactctgatttcttttcctttcccctccaaggggtcaggcgtgctagcaaccgc 7878 Query: 262 atgatacaccaggctggccggtgcaacttgttactcg-tactgaatagtacgcttacatg 320 | ||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 7877 aacatacaccagactggccggtgcaacttgttactctctactgaatagtacgcttatatg 7818 Query: 321 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagcgccgtccgga 380 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 7817 ggctggaagcccttcagccgttgatgtggctcaccatccacagtggaagccccgtccggg 7758 Query: 381 gtgggacctgaggctgcactgccacatcctctgccctctcgcctgccgccgctgggtgat 440 ||||| |||| |||||||||||| ||||| ||||||||||||||||||||||||| ||| Sbjct: 7757 gtggggcctgcggctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaa 7698 Query: 441 tgctg 445 ||||| Sbjct: 7697 tgctg 7693 Score = 155 bits (78), Expect = 2e-34 Identities = 97/104 (93%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 7528 ctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtt 7469 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgctt 546 ||||||||||| |||||||| ||||||| ||||||||| ||||| Sbjct: 7468 tgaggctgagtctgatcttgttgcgccgcctgggccttctgctt 7425 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/94 (87%) Strand = Plus / Minus Query: 28 gataggttaattcacagaaacaacacccaggtagcaacgggtatcatcgaaagttgaaaa 87 |||||||||||||||| |||||||| || ||| ||||||||||| |||| ||||||| Sbjct: 8096 gataggttaattcacataaacaacatcccactagagacgggtatcatggaaacttgaaaa 8037 Query: 88 ttcgtcactcatgctacatataaattacatggta 121 ||| ||||||| |||||||||| ||||||||||| Sbjct: 8036 ttcatcactcaagctacatatagattacatggta 8003 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 7325 ttccttctggagaactttattc 7304
>gb|AY466448.1| Triticum turgidum subsp. durum clone BAC 1256C17 VRN-A1 gene, partial cds Length = 959 Score = 161 bits (81), Expect = 3e-36 Identities = 102/110 (92%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 ||||||| |||| |||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct: 685 ctggtatttgcggcagggggagcatccctcagcatgaaggaagaagatgaagagctggtt 626 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgcttntccac 552 |||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 625 tgaggctgagtttgatcttgctgcgccgcatgggccttctgcttctccac 576 Score = 135 bits (68), Expect = 2e-28 Identities = 98/108 (90%) Strand = Plus / Minus Query: 338 ccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggacctgaggctgc 397 |||||||||||||||||||||||| |||||||| |||||||| ||||| |||| |||||| Sbjct: 955 ccgttgatgtggctcaccatccacggtggaagccccgtccggggtggggcctgcggctgc 896 Query: 398 actgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 445 |||||| ||||||||||||||||||||| |||||||| ||| ||||| Sbjct: 895 actgccgcatcctctgccctctcgcctgttgccgctggatgaatgctg 848 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 480 ttccttctggagaactttattc 459
>gb|AY466446.1| Aegilops tauschii clone BAC 22J2 VRN-D1 gene, partial cds Length = 957 Score = 159 bits (80), Expect = 1e-35 Identities = 104/112 (92%) Strand = Plus / Minus Query: 334 tcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggacctgagg 393 ||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| || Sbjct: 957 tcagccgttgatgtggctcaccatccacagtggaagccccgtccggggtggggcctgcgg 898 Query: 394 ctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 445 |||||||||| ||||| ||||||||||||||||||||||||| ||| ||||| Sbjct: 897 ctgcactgccgcatcccctgccctctcgcctgccgccgctggatgaatgctg 846 Score = 155 bits (78), Expect = 2e-34 Identities = 97/104 (93%) Strand = Plus / Minus Query: 443 ctggtatctgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtt 502 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 681 ctggtagctgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtt 622 Query: 503 tgaggctgagtttgatcttgctgcgccgnctgggccttntgctt 546 ||||||||||| |||||||| ||||||| ||||||||| ||||| Sbjct: 621 tgaggctgagtctgatcttgttgcgccgcctgggccttctgctt 578 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 478 ttccttctggagaactttattc 457
>gb|AY466447.1| Triticum turgidum subsp. durum clone BAC 1225D16 VRN-B1 gene, partial cds Length = 965 Score = 147 bits (74), Expect = 5e-32 Identities = 90/96 (93%) Strand = Plus / Minus Query: 451 tgcgacagggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctg 510 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 681 tgcggcagggggagcatccctcatcatgaaggaagaagaagaagagcttgtttgaggctg 622 Query: 511 agtttgatcttgctgcgccgnctgggccttntgctt 546 ||| |||||||| ||||||| ||||||||| ||||| Sbjct: 621 agtctgatcttgttgcgccgcctgggccttctgctt 586 Score = 135 bits (68), Expect = 2e-28 Identities = 101/112 (90%) Strand = Plus / Minus Query: 334 tcagccgttgatgtggctcaccatccacagtggaagcgccgtccggagtgggacctgagg 393 |||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||| || Sbjct: 965 tcagccgttgatgtggctaaccatccacagtggaagccccgtccggggtggggcctgcgg 906 Query: 394 ctgcactgccacatcctctgccctctcgcctgccgccgctgggtgattgctg 445 |||||||||| |||||||||||||||| |||| |||||||| ||| ||||| Sbjct: 905 ctgcactgccgcatcctctgccctctctcctgatgccgctggatgaatgctg 854 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 486 ttccttctggagaactttattc 465
>gb|AY395715.1| Dendrocalamus latiflorus MADS-box protein (Mads2) mRNA, complete cds Length = 735 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 462 gagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttg 516 |||| ||||||||||||||||| || ||||| || || ||||| ||||||||||| Sbjct: 613 gagcttccctcatcatgaaggacgaggaagaggaactagtttgcggctgagtttg 559 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 ||||||||||||||||||||||||| Sbjct: 733 agccgttgatgtggctcaccatcca 709
>gb|AY395714.1| Dendrocalamus latiflorus MADS-box protein (Mads1) mRNA, complete cds Length = 735 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 462 gagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttg 516 |||| ||||||||||||||||| || ||||| || || ||||| ||||||||||| Sbjct: 613 gagcttccctcatcatgaaggacgaggaagaggaactagtttgcggctgagtttg 559 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 ||||||||||||||||||||||||| Sbjct: 733 agccgttgatgtggctcaccatcca 709
>gb|AY198326.1| Lolium perenne MADS1 mRNA, complete cds Length = 1284 Score = 54.0 bits (27), Expect = 5e-04 Identities = 86/104 (82%), Gaps = 5/104 (4%) Strand = Plus / Minus Query: 277 ggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctggaag--ccctt 334 |||||||||| || | ||| ||||||||||| |||| ||| |||| |||||| ||||| Sbjct: 960 ggccggtgcagctcgctacacgtactgaataatacgtttagatggagtggaaggcccctt 901 Query: 335 cagcc---gttgatgtggctcaccatccacagtggaagcgccgt 375 ||||| ||||||||| ||||||||||| |||||||| |||| Sbjct: 900 cagccattgttgatgtgactcaccatccatggtggaagcaccgt 857 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 458 gggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttg 516 |||| ||| |||| |||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 780 ggggtagcttcccccatcataaaggaggaggaggaagagctggtttggggctgagtttg 722
>gb|AF035378.1|AF035378 Lolium temulentum MADS-box protein 1 (MADS1) mRNA, complete cds Length = 1207 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 458 gggggagcatccctcatcatgaaggaagaagaagaagagctggtttgaggctgagtttg 516 |||| ||| |||| |||||| ||||| || || |||||||||||||| ||||||||||| Sbjct: 756 ggggtagcttcccccatcataaaggaggaggaggaagagctggtttggggctgagtttg 698 Score = 46.1 bits (23), Expect = 0.13 Identities = 85/104 (81%), Gaps = 5/104 (4%) Strand = Plus / Minus Query: 277 ggccggtgcaacttgttactcgtactgaatagtacgcttacatgggctggaag--ccctt 334 |||||||||| || | ||| ||||||||||| |||| ||| |||| |||||| ||||| Sbjct: 936 ggccggtgcagctcgctacacgtactgaataatacgtttagatggagtggaaggaccctt 877 Query: 335 cagcc---gttgatgtggctcaccatccacagtggaagcgccgt 375 ||||| ||||| ||| ||||||||||| |||||||| |||| Sbjct: 876 cagccattgttgaggtgactcaccatccatggtggaagcaccgt 833
>gb|AC157211.7| Mus musculus chromosome 1, clone RP23-204C6, complete sequence Length = 206840 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 478 gaaggaagaagaagaagagctg 499 |||||||||||||||||||||| Sbjct: 96796 gaaggaagaagaagaagagctg 96817
>gb|AC103358.7| Mus musculus chromosome 19, clone RP24-358I11, complete sequence Length = 117340 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 210 actctgatttcttttcctctcc 231 |||||||||||||||||||||| Sbjct: 26709 actctgatttcttttcctctcc 26730
>emb|AL161452.19| Human DNA sequence from clone RP11-426A6 on chromosome 9 Contains the OBP2A gene for odorant-binding protein 2A, the LCN1 gene for lipocalin 1, the MRPS2 gene for mitochondrial ribosomal protein S2, gene MGC29761, a novel gene, gene KIAA0649, a novel gene, a novel gene, a suppressor of cytokine signaling 5 (SOCS5) pseudogene and two CpG islands, complete sequence Length = 153231 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 221 ttttcctctcccctccatgggg 242 |||||||||||||||||||||| Sbjct: 51042 ttttcctctcccctccatgggg 51021
>gb|AC157907.2| Mus musculus chromosome 19, clone RP23-79H21, complete sequence Length = 153518 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 210 actctgatttcttttcctctcc 231 |||||||||||||||||||||| Sbjct: 56837 actctgatttcttttcctctcc 56816
>gb|AF112150.1|AF112150 Zea mays MADS box protein 3 (mads3) mRNA, complete cds Length = 1250 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 469 cctcatcatgaaggaagaagaagaagagct 498 ||||||||||||||||||||| || ||||| Sbjct: 702 cctcatcatgaaggaagaagacgatgagct 673
>gb|AY244509.1| Triticum monococcum cultivar G2528 MADS-box transcriptional factor (AP1) gene, partial cds Length = 666 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 524 ttccttctggagaactttattc 503
>gb|AY244508.1| Triticum monococcum cultivar G1777 MADS-box transcriptional factor (AP1) gene, partial cds Length = 667 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 556 ttccttctggagaactttattc 577 |||||||||||||||||||||| Sbjct: 524 ttccttctggagaactttattc 503
>gb|AY109034.1| Zea mays PCO141183 mRNA sequence Length = 659 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 469 cctcatcatgaaggaagaagaagaagagct 498 ||||||||||||||||||||| || ||||| Sbjct: 253 cctcatcatgaaggaagaagacgatgagct 224
>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217496 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 tcttttcctctcccctccatg 239 ||||||||||||||||||||| Sbjct: 139234 tcttttcctctcccctccatg 139214
>gb|AC139218.10| Mus musculus chromosome 15, clone RP23-456O10, complete sequence Length = 163749 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 482 gaagaagaagaagagctggtttgag 506 ||||||||||||||| ||||||||| Sbjct: 76804 gaagaagaagaagagttggtttgag 76780
>ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 783 agccgttgatgtggctcagcatcca 759
>gb|AC108852.9| Mus musculus chromosome 3, clone RP24-87H3, complete sequence Length = 220174 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaagag 496 ||||||||||||||||||||| Sbjct: 41848 atgaaggaagaagaagaagag 41828
>gb|AC100381.9| Mus musculus chromosome 3, clone RP23-132C6, complete sequence Length = 190741 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaagag 496 ||||||||||||||||||||| Sbjct: 107493 atgaaggaagaagaagaagag 107473
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 64162 agccgttgatgtggctcagcatcca 64138
>gb|AC112143.5| Mus musculus BAC clone RP23-29E2 from chromosome 2, complete sequence Length = 205920 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 catgaaggaagaagaagaaga 495 ||||||||||||||||||||| Sbjct: 79753 catgaaggaagaagaagaaga 79733
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 30739621 agccgttgatgtggctcagcatcca 30739645 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 122642 atgaaggaagaagaagaaga 122661
>gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS211 mRNA, complete cds Length = 1109 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 861 agccgttgatgtggctcagcatcca 837
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 22769 agccgttgatgtggctcagcatcca 22745
>gb|AC140222.3| Mus musculus BAC clone RP24-330A7 from chromosome 9, complete sequence Length = 145102 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 catgaaggaagaagaagaaga 495 ||||||||||||||||||||| Sbjct: 64591 catgaaggaagaagaagaaga 64611
>gb|AC144564.12| Medicago truncatula clone mth2-17n4, complete sequence Length = 130660 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 catgaaggaagaagaagaaga 495 ||||||||||||||||||||| Sbjct: 75424 catgaaggaagaagaagaaga 75404
>emb|AL512663.4| Human DNA sequence from clone RP11-356H7 on chromosome 1, complete sequence Length = 75171 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 103 acatataaattacatggtaga 123 ||||||||||||||||||||| Sbjct: 24219 acatataaattacatggtaga 24199
>gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL10) mRNA, complete cds Length = 964 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 827 agccgttgatgtggctcagcatcca 803
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 48322 agccgttgatgtggctcagcatcca 48346
>dbj|AK084359.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230030M07 product:unclassifiable, full insert sequence Length = 892 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaagag 496 ||||||||||||||||||||| Sbjct: 547 atgaaggaagaagaagaagag 567
>gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217586 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 219 tcttttcctctcccctccatg 239 ||||||||||||||||||||| Sbjct: 164000 tcttttcctctcccctccatg 164020
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 30831045 agccgttgatgtggctcagcatcca 30831069 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 122642 atgaaggaagaagaagaaga 122661
>gb|AF139664.2|AF139664 Oryza sativa FDRMADS6 mRNA, complete cds Length = 1101 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 754 agccgttgatgtggctcagcatcca 730
>gb|AC084564.1|CBRG36H10 Caenorhabditis briggsae cosmid G36H10, complete sequence Length = 44789 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 catgaaggaagaagaagaaga 495 ||||||||||||||||||||| Sbjct: 32112 catgaaggaagaagaagaaga 32132
>gb|AY198327.1| Lolium perenne MADS2 mRNA, complete cds Length = 1083 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 466 atccctcatcatgaaggaagaagaagaagagct 498 |||||||||||||||||| ||||| || ||||| Sbjct: 727 atccctcatcatgaaggaggaagatgatgagct 695
>gb|AC012485.13| Homo sapiens BAC clone RP11-5O24 from 2, complete sequence Length = 168738 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ggacctgaggctgcactgcca 404 ||||||||||||||||||||| Sbjct: 55164 ggacctgaggctgcactgcca 55184
>gb|AF058697.1|AF058697 Oryza sativa MADS14 protein mRNA, complete cds Length = 1373 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 1026 agccgttgatgtggctcagcatcca 1002
>dbj|AP001827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-236L10, complete sequence Length = 167639 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 catgaaggaagaagaagaaga 495 ||||||||||||||||||||| Sbjct: 160750 catgaaggaagaagaagaaga 160730
>gb|AF035379.1|AF035379 Lolium temulentum MADS-box protein 2 (MADS2) mRNA, alternatively spliced product, complete cds Length = 1062 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 466 atccctcatcatgaaggaagaagaagaagagct 498 |||||||||||||||||| ||||| || ||||| Sbjct: 726 atccctcatcatgaaggaggaagatgatgagct 694
>emb|AL928583.10| Mouse DNA sequence from clone RP23-287C12 on chromosome 2, complete sequence Length = 118230 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 catgaaggaagaagaagaaga 495 ||||||||||||||||||||| Sbjct: 46956 catgaaggaagaagaagaaga 46936
>gb|AC153867.3| Mus musculus 6 BAC RP23-400K22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse6 BAC Library) complete sequence Length = 196838 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 219 tcttttcctctcccctccatg 239 ||||||||||||||||||||| Sbjct: 192924 tcttttcctctcccctccatg 192904
>dbj|AB041020.1| Oryza sativa RAP1B mRNA for AP1-like MADS box protein, complete cds Length = 1124 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 336 agccgttgatgtggctcaccatcca 360 |||||||||||||||||| |||||| Sbjct: 744 agccgttgatgtggctcagcatcca 720
>ref|NM_118751.2| Arabidopsis thaliana binding / transporter AT4G26180 mRNA, complete cds Length = 1126 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 54 atgaaggaagaagaagaaga 35
>ref|NM_112470.2| Arabidopsis thaliana MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1) AT3G16000 (MFP1) mRNA, complete cds Length = 2537 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tccacaagttccttctggag 567 |||||||||||||||||||| Sbjct: 1844 tccacaagttccttctggag 1825
>ref|NM_124668.2| Arabidopsis thaliana unknown protein AT5G52900 mRNA, complete cds Length = 1275 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 265 atgaaggaagaagaagaaga 246
>ref|NM_111151.3| Arabidopsis thaliana ZFN1 (ZINC FINGER PROTEIN 1); nucleic acid binding AT3G02830 (ZFN1) mRNA, complete cds Length = 1658 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aaggaagaagaagaagagct 498 |||||||||||||||||||| Sbjct: 1438 aaggaagaagaagaagagct 1457
>ref|XM_521057.1| PREDICTED: Pan troglodytes similar to L-type calcium channel alpha-1 subunit (LOC465629), mRNA Length = 3511 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 cactgccacatcctctgccctctc 420 ||||||| |||||||||||||||| Sbjct: 158 cactgccccatcctctgccctctc 181
>gb|AF196779.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 176767 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 cactgccacatcctctgccctctc 420 ||||||| |||||||||||||||| Sbjct: 172530 cactgccccatcctctgccctctc 172507
>gb|AF235097.2| Homo sapiens chromosome X multiple clones map p11.23, complete sequence Length = 140335 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 cactgccacatcctctgccctctc 420 ||||||| |||||||||||||||| Sbjct: 17800 cactgccccatcctctgccctctc 17777
>gb|AC149133.1| Pan troglodytes chromosome X clone RP43-010O16 map human ortholog p11.23 complete sequence Length = 179327 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 cactgccacatcctctgccctctc 420 ||||||| |||||||||||||||| Sbjct: 145722 cactgccccatcctctgccctctc 145699
>gb|AC144651.2| Mus musculus BAC clone RP24-251O18 from chromosome Y, complete sequence Length = 144831 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 18002 atgaaggaagaagaagaaga 18021
>gb|AC183300.4| Pan troglodytes BAC clone CH251-263P14 from chromosome 4, complete sequence Length = 171121 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 159854 tttcttttcctctcccctcc 159873 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 49290 tttcttttcctctcccctcc 49309
>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete sequence Length = 216041 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 81520 tttcttttcctctcccctcc 81501
>gb|AC117118.4| Rattus norvegicus 1 BAC CH230-161O8 (Children's Hospital Oakland Research Institute) complete sequence Length = 216036 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 tcatgctacatataaattac 115 |||||||||||||||||||| Sbjct: 160116 tcatgctacatataaattac 160097
>gb|AC132349.3| Mus musculus BAC clone RP24-82B7 from chromosome 16, complete sequence Length = 216783 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 48992 atgaaggaagaagaagaaga 48973
>ref|XM_843231.1| PREDICTED: Canis familiaris similar to guanine nucleotide binding protein-like 1, transcript variant 2 (LOC474825), mRNA Length = 2166 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 aggaagaagaagaagagctg 499 |||||||||||||||||||| Sbjct: 1897 aggaagaagaagaagagctg 1916
>ref|XM_532055.2| PREDICTED: Canis familiaris similar to guanine nucleotide binding protein-like 1, transcript variant 1 (LOC474825), mRNA Length = 2030 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 aggaagaagaagaagagctg 499 |||||||||||||||||||| Sbjct: 1761 aggaagaagaagaagagctg 1780
>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence, complete sequence Length = 100559 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 aaggaagaagaagaagagct 498 |||||||||||||||||||| Sbjct: 70387 aaggaagaagaagaagagct 70368
>gb|AC118038.15| Mus musculus chromosome 15, clone RP23-87G17, complete sequence Length = 209907 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 139660 atgaaggaagaagaagaaga 139641
>ref|XM_809538.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509237.40) partial mRNA Length = 735 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 aggaagaagaagaagagctg 499 |||||||||||||||||||| Sbjct: 275 aggaagaagaagaagagctg 294
>gb|AC125109.3| Mus musculus BAC clone RP24-232H5 from chromosome 3, complete sequence Length = 165361 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 tcttttcctctcccctccat 238 |||||||||||||||||||| Sbjct: 142292 tcttttcctctcccctccat 142273
>gb|AC125074.3| Mus musculus BAC clone RP23-464N18 from chromosome 14, complete sequence Length = 181200 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 115317 tttcttttcctctcccctcc 115298
>gb|AC144538.23| Medicago truncatula clone mth2-31l21, complete sequence Length = 135050 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 87099 atgaaggaagaagaagaaga 87080
>gb|AC135100.12| Medicago truncatula clone mth2-17j9, complete sequence Length = 113967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 84478 atgaaggaagaagaagaaga 84497
>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence Length = 115857 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 50715 atgaaggaagaagaagaaga 50696
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gatttcttttcctctcccct 234 |||||||||||||||||||| Sbjct: 4111566 gatttcttttcctctcccct 4111547
>emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on chromosome 1 Contains the GJA5 gene for gap junction protein, alpha 5, 40kDa (connexin 40) protein, complete sequence Length = 114412 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ggaaaggaaactgaggtgga 171 |||||||||||||||||||| Sbjct: 43104 ggaaaggaaactgaggtgga 43085
>emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chromosome 13 Contains a cytochrome c oxidase subunit IV pseudogene, a novel gene, an aldo-keto reductase family 1, member B10 (aldose reductase) (AKR1B10) pseudogene, a novel gene, similar to RIKEN cDNA 1700086N05 and CpG island, complete sequence Length = 112107 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 tctgatttcttttcctctcc 231 |||||||||||||||||||| Sbjct: 46525 tctgatttcttttcctctcc 46544
>gb|AY059753.1| Arabidopsis thaliana At3g16000 mRNA sequence Length = 2561 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tccacaagttccttctggag 567 |||||||||||||||||||| Sbjct: 1883 tccacaagttccttctggag 1864
>emb|Z99708.1|ATAP22 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 2 Length = 198354 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 26861 atgaaggaagaagaagaaga 26842
>ref|XM_780940.1| PREDICTED: Strongylocentrotus purpuratus similar to solute carrier family 4, sodium bicarbonate transporter-like, member 10 (LOC580912), mRNA Length = 6480 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 catcatgaaggaagaagaagaaga 495 |||||| ||||||||||||||||| Sbjct: 1778 catcatcaaggaagaagaagaaga 1801
>emb|AL161590.2|ATCHRIV86 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 86 Length = 198780 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 30117 atgaaggaagaagaagaaga 30136
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 150445 atgaaggaagaagaagaaga 150464
>emb|AL049483.1|ATF20B18 Arabidopsis thaliana DNA chromosome 4, BAC clone F20B18 (ESSA project) Length = 104738 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 99760 atgaaggaagaagaagaaga 99779
>emb|AL049171.1|ATT25K17 Arabidopsis thaliana DNA chromosome 4, BAC clone (ESSA project) Length = 89904 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 6092 atgaaggaagaagaagaaga 6111
>gb|BT008690.1| Arabidopsis thaliana clone RAFL09-77-G13 (R19601) putative myosin heavy chain (At3g16000) mRNA, complete cds Length = 2521 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tccacaagttccttctggag 567 |||||||||||||||||||| Sbjct: 1846 tccacaagttccttctggag 1827
>emb|AJ006216.1|HSA6216 Homo sapiens CACNA1F gene, exons 1 to 48 Length = 31501 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 397 cactgccacatcctctgccctctc 420 ||||||| |||||||||||||||| Sbjct: 25264 cactgccccatcctctgccctctc 25287
>emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on chromosome 11 Contains the 5' end of a novel gene, a novel gene (4933430M04Rik) and a pseudogene similar to part of DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 (Ddx5), complete sequence Length = 181503 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ctactttactctgatttctt 222 |||||||||||||||||||| Sbjct: 84876 ctactttactctgatttctt 84895
>gb|AC015813.12| Homo sapiens, clone RP11-159D12, complete sequence Length = 181494 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 aggtggaaaggaaactgagg 167 |||||||||||||||||||| Sbjct: 131358 aggtggaaaggaaactgagg 131377
>gb|AC037487.12| Homo sapiens chromosome 17, clone RP11-583F2, complete sequence Length = 176807 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 1994 atgaaggaagaagaagaaga 1975
>gb|AC015821.9| Homo sapiens chromosome 17, clone RP11-160O5, complete sequence Length = 160184 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 90847 atgaaggaagaagaagaaga 90828
>gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome 14, complete sequence Length = 210912 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 58360 tttcttttcctctcccctcc 58379
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 56642 atgaaggaagaagaagaaga 56661
>gb|AC182643.2| Pan troglodytes BAC clone CH251-219K6 from chromosome 4, complete sequence Length = 176400 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 102601 tttcttttcctctcccctcc 102582
>gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map m283, complete sequence Length = 89779 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 13763 atgaaggaagaagaagaaga 13744
>gb|AC093890.3| Homo sapiens BAC clone RP11-673E1 from 4, complete sequence Length = 171358 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 68545 tttcttttcctctcccctcc 68526
>gb|AC104090.3| Homo sapiens BAC clone RP11-780M14 from 4, complete sequence Length = 101033 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 94746 tttcttttcctctcccctcc 94727
>gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosome y, complete sequence Length = 174066 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 104 catataaattacatggtagattac 127 |||||||| ||||||||||||||| Sbjct: 100712 catataaaatacatggtagattac 100735
>gb|AC010236.5| Homo sapiens chromosome 5 clone CTC-340D7, complete sequence Length = 121439 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 aggaagaagaagaagagctg 499 |||||||||||||||||||| Sbjct: 62816 aggaagaagaagaagagctg 62797
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 2576 atgaaggaagaagaagaaga 2557
>gb|BT006089.1| Arabidopsis thaliana clone U20957 unknown protein (At5g52900) mRNA, complete cds Length = 739 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 149 atgaaggaagaagaagaaga 130
>gb|AC048387.16| Homo sapiens chromosome 8, clone RP11-465K16, complete sequence Length = 193896 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 ttcttttcctctcccctcca 237 |||||||||||||||||||| Sbjct: 95990 ttcttttcctctcccctcca 95971
>gb|AC024567.6|AC024567 Homo sapiens chromosome 5 clone CTD-2161I13, complete sequence Length = 99338 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 480 aggaagaagaagaagagctg 499 |||||||||||||||||||| Sbjct: 14462 aggaagaagaagaagagctg 14443
>gb|AC155641.8| Mus musculus 10 BAC RP24-121N1 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 195480 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 107816 atgaaggaagaagaagaaga 107797
>emb|BX822532.1|CNS0A63L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1549 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aaggaagaagaagaagagct 498 |||||||||||||||||||| Sbjct: 1389 aaggaagaagaagaagagct 1408
>gb|AC016642.7| Homo sapiens chromosome 5 clone RP11-479O16, complete sequence Length = 160907 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 72978 atgaaggaagaagaagaaga 72959
>gb|BT005766.1| Arabidopsis thaliana clone RAFL15-29-O03 (R20957) unknown protein (At5g52900) mRNA, complete cds Length = 1266 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 240 atgaaggaagaagaagaaga 221
>gb|AC009180.9|AC009180 Homo sapiens chromosome 7 clone RP11-209G24, complete sequence Length = 163384 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 64139 atgaaggaagaagaagaaga 64158
>gb|AC084678.1|CBRG47M11 Caenorhabditis briggsae cosmid G47M11, complete sequence Length = 36601 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 5665 atgaaggaagaagaagaaga 5646
>gb|AC087645.19| Homo sapiens chromosome 17, clone RP11-219G17, complete sequence Length = 209751 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 135407 atgaaggaagaagaagaaga 135426
>gb|AC004757.2| Homo sapiens chromosome 17, clone CTB-117K16, complete sequence Length = 107156 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 aggtggaaaggaaactgagg 167 |||||||||||||||||||| Sbjct: 82688 aggtggaaaggaaactgagg 82669
>gb|AY085371.1| Arabidopsis thaliana clone 148254 mRNA, complete sequence Length = 1192 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 243 atgaaggaagaagaagaaga 224
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 139976 atgaaggaagaagaagaaga 139957
>dbj|AB012247.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MSL1 Length = 79355 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 tccacaagttccttctggag 567 |||||||||||||||||||| Sbjct: 23801 tccacaagttccttctggag 23820
>dbj|AB009055.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC20 Length = 81575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 58600 atgaaggaagaagaagaaga 58619
>dbj|AK117978.1| Arabidopsis thaliana At3g02830 mRNA for putative zinc finger protein 1 (zfn1), complete cds, clone: RAFL19-18-D10 Length = 1626 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aaggaagaagaagaagagct 498 |||||||||||||||||||| Sbjct: 1406 aaggaagaagaagaagagct 1425
>dbj|AB025622.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFH8 Length = 62420 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 catgaaggaagaagaagaag 494 |||||||||||||||||||| Sbjct: 37804 catgaaggaagaagaagaag 37785
>emb|X16039.1|LLRBCS Larix laricina rbcS gene for ribulose-1,5-carboxylase/oxygenase (EC 4.1.1.39) Length = 3679 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 473 atcatgaaggaagaagaagaagag 496 ||||||| |||||||||||||||| Sbjct: 2439 atcatgatggaagaagaagaagag 2416
>emb|BX927241.19| Zebrafish DNA sequence from clone DKEY-184P18 in linkage group 19, complete sequence Length = 140932 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cagaaacaacacccaggtag 61 |||||||||||||||||||| Sbjct: 32043 cagaaacaacacccaggtag 32062
>dbj|AK062867.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-B11, full insert sequence Length = 467 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 109 atgaaggaagaagaagaaga 90
>gb|AC122736.13| Mus musculus chromosome 7, clone RP23-272F2, complete sequence Length = 226595 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 tgaaggaagaagaagaagag 496 |||||||||||||||||||| Sbjct: 124737 tgaaggaagaagaagaagag 124718
>gb|AF138743.1|AF138743 Arabidopsis thaliana zinc finger protein 1 (zfn1) mRNA, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 479 aaggaagaagaagaagagct 498 |||||||||||||||||||| Sbjct: 1202 aaggaagaagaagaagagct 1221
>gb|AC138528.8| Mus musculus chromosome 3, clone RP23-329L9, complete sequence Length = 188290 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 catccctcatcatgaaggaa 484 |||||||||||||||||||| Sbjct: 159395 catccctcatcatgaaggaa 159376
>gb|AC145597.4| Mus musculus BAC clone RP24-323M2 from Y, complete sequence Length = 199904 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 476 atgaaggaagaagaagaaga 495 |||||||||||||||||||| Sbjct: 155803 atgaaggaagaagaagaaga 155822
>gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, complete sequence Length = 170634 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 122835 tttcttttcctctcccctcc 122854
>gb|U93305.1|HSU93305 Homo sapiens A4 differentiation-dependent protein (A4), triple LIM domain protein (LMO6), and synaptophysin (SYP) genes, complete cds; and calcium channel alpha-1 subunit (CACNA1F) gene, partial cds Length = 44147 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 cactgccacatcctctgccctctc 420 ||||||| |||||||||||||||| Sbjct: 39909 cactgccccatcctctgccctctc 39886
>emb|AL805899.20| Mouse DNA sequence from clone RP23-400P11 on chromosome 4, complete sequence Length = 204367 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 gaagaagaagaagagctggt 501 |||||||||||||||||||| Sbjct: 161063 gaagaagaagaagagctggt 161082
>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete sequence Length = 226637 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tttcttttcctctcccctcc 236 |||||||||||||||||||| Sbjct: 93924 tttcttttcctctcccctcc 93943 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,847,680 Number of Sequences: 3902068 Number of extensions: 6847680 Number of successful extensions: 712645 Number of sequences better than 10.0: 178 Number of HSP's better than 10.0 without gapping: 180 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 710660 Number of HSP's gapped (non-prelim): 1927 length of query: 577 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 554 effective length of database: 17,143,297,704 effective search space: 9497386928016 effective search space used: 9497386928016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
