ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24k06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550208.1| Oryza sativa (japonica cultivar-group), mRNA 157 6e-35
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 157 6e-35
3dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D... 157 6e-35
4dbj|AK063812.1| Oryza sativa (japonica cultivar-group) cDNA clon... 157 6e-35
5dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 157 6e-35
6dbj|AK102322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
7dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic D... 133 8e-28
8gb|AC005610.1| Homo sapiens chromosome 5, PAC clone 502L6 (LBNL ... 46 0.15
9gb|AC010626.6| Homo sapiens chromosome 5 clone CTD-2138K21, comp... 46 0.15
10dbj|AP006184.1| Sus scrofa CC chemokine receptor genes (CCR9, CX... 46 0.15
11gb|CP000081.1| Leishmania major chromosome 35, complete sequence 44 0.60
12emb|AL645907.9| Mouse DNA sequence from clone RP23-9N7 on chromo... 44 0.60
13gb|DQ369998.1| HIV-1 isolate 04ZASK172B1 from South Africa, comp... 44 0.60
14gb|AC126796.4| Mus musculus BAC clone RP23-384F19 from chromosom... 42 2.4
15emb|AL162424.20| Human DNA sequence from clone RP11-498E2 on chr... 42 2.4
16gb|AC125204.4| Mus musculus BAC clone RP23-237H8 from 10, comple... 42 2.4
17gb|AC009522.11| Homo sapiens 12 BAC RP11-591N1 (Roswell Park Can... 42 2.4
18gb|AF355464.1|AF355464 Oryctolagus cuniculus flavin-containing m... 42 2.4
19gb|AY085730.1| Arabidopsis thaliana clone 17437 mRNA, complete s... 42 2.4
20gb|AC104038.9| Homo sapiens chromosome 11, clone RP11-746C23, co... 42 2.4
21emb|AL953872.7| Zebrafish DNA sequence from clone CH211-235H23, ... 42 2.4
22gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 9.4
23gb|AC155713.14| Mus musculus 10 BAC RP24-117K18 (Roswell Park Ca... 40 9.4
24ref|XM_870543.1| PREDICTED: Bos taurus similar to Rho guanine nu... 40 9.4
25gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosom... 40 9.4
26emb|AJ459965.1|ECA459965 Equus caballus CRISP3 gene for cysteine... 40 9.4
27ref|XM_806090.1| Trypanosoma cruzi strain CL Brener Unc104-like ... 40 9.4
28gb|BC059305.1| Xenopus laevis hypothetical protein MGC68950, mRN... 40 9.4
29ref|XM_764361.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 9.4
30gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, co... 40 9.4
31gb|AC166559.2| Spironucleus vortens clone JGIBAWF-5H13, complete... 40 9.4
32gb|DQ472026.1| Nautilus macromphalus mitochondrion, complete genome 40 9.4
33emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chr... 40 9.4
34emb|AL365402.17| Human DNA sequence from clone RP11-445K1 on chr... 40 9.4
35gb|AF491081.1| Garmannia chiquita 12S ribosomal RNA gene, partia... 40 9.4
36emb|AL078477.5|HSDJ259N9 Human DNA sequence from clone RP1-69B10... 40 9.4
37emb|Y07760.1|CAV1GENOM Canine adenovirus type 1 complete genome 40 9.4
38gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosom... 40 9.4
39gb|AY834753.1| Cystobacter fuscus cystothiazole A gene cluster, ... 40 9.4
40dbj|AB187566.1| Murine leukemia virus Graffi GV-1.4 DNA, complet... 40 9.4
41dbj|AB187565.1| Murine leukemia virus Graffi GV-1.2 DNA, complet... 40 9.4
42gb|AC109604.8| Mus musculus strain 129Sv/CJ7 clone rp22-298k22, ... 40 9.4
43gb|AC016994.8| Homo sapiens BAC clone RP11-19J8 from 2, complete... 40 9.4
44gb|AY034137.1| Rattus norvegicus aldehyde dehydrogenase gene, ex... 40 9.4
45gb|AF141932.2|AF141932 Rhizobium leguminosarum bv. trifolii bact... 40 9.4
46gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 9.4
47gb|AC011631.6|AC011631 Homo sapiens, clone RP11-1I20, complete s... 40 9.4
48gb|AF019230.1|AF019230 Murine leukemia virus strain SRS 19-6 com... 40 9.4
49gb|AC008068.4| Homo sapiens BAC clone RP11-334F17 from 2, comple... 40 9.4
50gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, ... 40 9.4
51dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.4
52gb|AE004446.1| Pseudomonas aeruginosa PAO1, section 7 of 529 of ... 40 9.4
53gb|AC087653.6| Homo sapiens chromosome 11, clone RP1-259N9, comp... 40 9.4
54gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 9.4
55gb|M60937.1|AECE2AA Canine adenovirus type 1 putative ORF1 (p-VI... 40 9.4
56emb|AL954697.15| Zebrafish DNA sequence from clone CH211-286K11 ... 40 9.4
57emb|AJ328806.1|HSA328806 Homo sapiens genomic sequence surroundi... 40 9.4
58ref|NM_210773.1| Eremothecium gossypii AFL131Wp (AFL131W), mRNA 40 9.4
59gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Can... 40 9.4
60gb|AC153920.5| Mus musculus 10 BAC RP23-82M21 (Roswell Park Canc... 40 9.4
61gb|AC078897.20| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 9.4
62emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 9.4
63gb|U55001.1|CAU55001 Canine adenovirus type 1 E1A protein, small... 40 9.4
64emb|AL845156.5| Mouse DNA sequence from clone RP23-340F21 on chr... 40 9.4 
>ref|XM_550208.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 869

 Score =  157 bits (79), Expect = 6e-35
 Identities = 280/347 (80%)
 Strand = Plus / Minus

                                                                       
Query: 100 tcattcttttgggatgatcttgatgcccttgataaggagccccctcttccactgcccacc 159
           ||||| ||||||||  |||||||| |||||||| || ||||| ||||||||| |||||||
Sbjct: 777 tcattgttttgggagaatcttgattcccttgattagtagccctctcttccacagcccacc 718

                                                                       
Query: 160 atcatactcaaacatggagatctcaacctctccattctgccccttgtgcggcttaacctc 219
           |||||||||||||||||| ||||||| |||||| ||||||||||  || |  || |||||
Sbjct: 717 atcatactcaaacatggatatctcaatctctcccttctgcccctgctgggttttcacctc 658

                                                                       
Query: 220 cccaaccttgacctgcagccacttccccctgggcttctcctgcaggttctccttctgctg 279
           ||| ||||||| || |||||| |||  ||||  ||||||||  || ||||| ||  ||||
Sbjct: 657 cccgaccttgagctccagccatttcatcctgatcttctcctcaagattctctttacgctg 598

                                                                       
Query: 280 ctggatcgtgccgtcggggaacttgagccggaggttcaccggcgtcgaccacccgtaggc 339
           |||||  || || || |||||||||||| | |||||||| ||    ||||||||||| ||
Sbjct: 597 ctggactgttccatcagggaacttgagctgaaggttcactgggacagaccacccgtatgc 538

                                                                       
Query: 340 cgggtcgtcgagcttcacctcgaagaagacctcgtaggtgactcctggcgtgagatggga 399
            || ||    ||| | || || ||||  ||||| |||||||||||||| || |||| |||
Sbjct: 537 aggatcaataagcattacttcaaagagaacctcataggtgactcctggtgtaagatagga 478

                                                          
Query: 400 cagctccagcttcccttggacctccagccagcagacgttctgcagcg 446
           | | || |||||||| |||| ||| | ||||||||||||||||||||
Sbjct: 477 ccgttcaagcttcccatggatctctaaccagcagacgttctgcagcg 431



 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Minus

                                                                       
Query: 466 cttccttctttcagggggtgccaagtccagtacttggggtcttcgctccaggtgatggcc 525
           |||||||||||||| || | |||||||||| |  |||||||||| ||||| ||||| | |
Sbjct: 392 cttccttctttcagaggtttccaagtccagaatctggggtcttcactccaagtgatagac 333

                                                                       
Query: 526 aggcctctagggaacaacatgaagcagttgtgcctggtcctctcgtccacccagtacttc 585
           | |||||| || |||| |||||||||||||| ||| || ||||| |||||||||||||||
Sbjct: 332 aagcctctgggaaacagcatgaagcagttgttcctagttctctcatccacccagtacttc 273

                                                          
Query: 586 tttgttttcccggccaagaagatcccggcggtgacctgatcttccag 632
           ||||||||||| ||||||||||| |||| |  || ||||||||||||
Sbjct: 272 tttgttttccctgccaagaagatgccggtgtagatctgatcttccag 226
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  157 bits (79), Expect = 6e-35
 Identities = 280/347 (80%)
 Strand = Plus / Plus

                                                                           
Query: 100     tcattcttttgggatgatcttgatgcccttgataaggagccccctcttccactgcccacc 159
               ||||| ||||||||  |||||||| |||||||| || ||||| ||||||||| |||||||
Sbjct: 3057656 tcattgttttgggagaatcttgattcccttgattagtagccctctcttccacagcccacc 3057715

                                                                           
Query: 160     atcatactcaaacatggagatctcaacctctccattctgccccttgtgcggcttaacctc 219
               |||||||||||||||||| ||||||| |||||| ||||||||||  || |  || |||||
Sbjct: 3057716 atcatactcaaacatggatatctcaatctctcccttctgcccctgctgggttttcacctc 3057775

                                                                           
Query: 220     cccaaccttgacctgcagccacttccccctgggcttctcctgcaggttctccttctgctg 279
               ||| ||||||| || |||||| |||  ||||  ||||||||  || ||||| ||  ||||
Sbjct: 3057776 cccgaccttgagctccagccatttcatcctgatcttctcctcaagattctctttacgctg 3057835

                                                                           
Query: 280     ctggatcgtgccgtcggggaacttgagccggaggttcaccggcgtcgaccacccgtaggc 339
               |||||  || || || |||||||||||| | |||||||| ||    ||||||||||| ||
Sbjct: 3057836 ctggactgttccatcagggaacttgagctgaaggttcactgggacagaccacccgtatgc 3057895

                                                                           
Query: 340     cgggtcgtcgagcttcacctcgaagaagacctcgtaggtgactcctggcgtgagatggga 399
                || ||    ||| | || || ||||  ||||| |||||||||||||| || |||| |||
Sbjct: 3057896 aggatcaataagcattacttcaaagagaacctcataggtgactcctggtgtaagatagga 3057955

                                                              
Query: 400     cagctccagcttcccttggacctccagccagcagacgttctgcagcg 446
               | | || |||||||| |||| ||| | ||||||||||||||||||||
Sbjct: 3057956 ccgttcaagcttcccatggatctctaaccagcagacgttctgcagcg 3058002



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                           
Query: 465     ccttccttctttcagggggtgccaagtccagtacttggggtcttcgctccaggtgatggc 524
               ||||||||||||||| || | |||||||||| |  |||||||||| ||||| ||||| | 
Sbjct: 3058151 ccttccttctttcagaggtttccaagtccagaatctggggtcttcactccaagtgataga 3058210

                                                                           
Query: 525     caggcctctagggaacaacatgaagcagttgtgcctggtcctctcgtccacccagtactt 584
               || |||||| || |||| |||||||||||||| ||| || ||||| ||||||||||||||
Sbjct: 3058211 caagcctctgggaaacagcatgaagcagttgttcctagttctctcatccacccagtactt 3058270

                 
Query: 585     ct 586
               ||
Sbjct: 3058271 ct 3058272



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 585     ctttgttttcccggccaagaagatcccggcggtgacctgatcttccag 632
               |||||||||||| ||||||||||| |||| |  || ||||||||||||
Sbjct: 3058371 ctttgttttccctgccaagaagatgccggtgtagatctgatcttccag 3058418
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>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0041E11
          Length = 146335

 Score =  157 bits (79), Expect = 6e-35
 Identities = 280/347 (80%)
 Strand = Plus / Plus

                                                                        
Query: 100  tcattcttttgggatgatcttgatgcccttgataaggagccccctcttccactgcccacc 159
            ||||| ||||||||  |||||||| |||||||| || ||||| ||||||||| |||||||
Sbjct: 1444 tcattgttttgggagaatcttgattcccttgattagtagccctctcttccacagcccacc 1503

                                                                        
Query: 160  atcatactcaaacatggagatctcaacctctccattctgccccttgtgcggcttaacctc 219
            |||||||||||||||||| ||||||| |||||| ||||||||||  || |  || |||||
Sbjct: 1504 atcatactcaaacatggatatctcaatctctcccttctgcccctgctgggttttcacctc 1563

                                                                        
Query: 220  cccaaccttgacctgcagccacttccccctgggcttctcctgcaggttctccttctgctg 279
            ||| ||||||| || |||||| |||  ||||  ||||||||  || ||||| ||  ||||
Sbjct: 1564 cccgaccttgagctccagccatttcatcctgatcttctcctcaagattctctttacgctg 1623

                                                                        
Query: 280  ctggatcgtgccgtcggggaacttgagccggaggttcaccggcgtcgaccacccgtaggc 339
            |||||  || || || |||||||||||| | |||||||| ||    ||||||||||| ||
Sbjct: 1624 ctggactgttccatcagggaacttgagctgaaggttcactgggacagaccacccgtatgc 1683

                                                                        
Query: 340  cgggtcgtcgagcttcacctcgaagaagacctcgtaggtgactcctggcgtgagatggga 399
             || ||    ||| | || || ||||  ||||| |||||||||||||| || |||| |||
Sbjct: 1684 aggatcaataagcattacttcaaagagaacctcataggtgactcctggtgtaagatagga 1743

                                                           
Query: 400  cagctccagcttcccttggacctccagccagcagacgttctgcagcg 446
            | | || |||||||| |||| ||| | ||||||||||||||||||||
Sbjct: 1744 ccgttcaagcttcccatggatctctaaccagcagacgttctgcagcg 1790



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                        
Query: 465  ccttccttctttcagggggtgccaagtccagtacttggggtcttcgctccaggtgatggc 524
            ||||||||||||||| || | |||||||||| |  |||||||||| ||||| ||||| | 
Sbjct: 1939 ccttccttctttcagaggtttccaagtccagaatctggggtcttcactccaagtgataga 1998

                                                                        
Query: 525  caggcctctagggaacaacatgaagcagttgtgcctggtcctctcgtccacccagtactt 584
            || |||||| || |||| |||||||||||||| ||| || ||||| ||||||||||||||
Sbjct: 1999 caagcctctgggaaacagcatgaagcagttgttcctagttctctcatccacccagtactt 2058

              
Query: 585  ct 586
            ||
Sbjct: 2059 ct 2060



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                            
Query: 585  ctttgttttcccggccaagaagatcccggcggtgacctgatcttccag 632
            |||||||||||| ||||||||||| |||| |  || ||||||||||||
Sbjct: 2159 ctttgttttccctgccaagaagatgccggtgtagatctgatcttccag 2206
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>dbj|AK063812.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G12, full
           insert sequence
          Length = 869

 Score =  157 bits (79), Expect = 6e-35
 Identities = 280/347 (80%)
 Strand = Plus / Minus

                                                                       
Query: 100 tcattcttttgggatgatcttgatgcccttgataaggagccccctcttccactgcccacc 159
           ||||| ||||||||  |||||||| |||||||| || ||||| ||||||||| |||||||
Sbjct: 777 tcattgttttgggagaatcttgattcccttgattagtagccctctcttccacagcccacc 718

                                                                       
Query: 160 atcatactcaaacatggagatctcaacctctccattctgccccttgtgcggcttaacctc 219
           |||||||||||||||||| ||||||| |||||| ||||||||||  || |  || |||||
Sbjct: 717 atcatactcaaacatggatatctcaatctctcccttctgcccctgctgggttttcacctc 658

                                                                       
Query: 220 cccaaccttgacctgcagccacttccccctgggcttctcctgcaggttctccttctgctg 279
           ||| ||||||| || |||||| |||  ||||  ||||||||  || ||||| ||  ||||
Sbjct: 657 cccgaccttgagctccagccatttcatcctgatcttctcctcaagattctctttacgctg 598

                                                                       
Query: 280 ctggatcgtgccgtcggggaacttgagccggaggttcaccggcgtcgaccacccgtaggc 339
           |||||  || || || |||||||||||| | |||||||| ||    ||||||||||| ||
Sbjct: 597 ctggactgttccatcagggaacttgagctgaaggttcactgggacagaccacccgtatgc 538

                                                                       
Query: 340 cgggtcgtcgagcttcacctcgaagaagacctcgtaggtgactcctggcgtgagatggga 399
            || ||    ||| | || || ||||  ||||| |||||||||||||| || |||| |||
Sbjct: 537 aggatcaataagcattacttcaaagagaacctcataggtgactcctggtgtaagatagga 478

                                                          
Query: 400 cagctccagcttcccttggacctccagccagcagacgttctgcagcg 446
           | | || |||||||| |||| ||| | ||||||||||||||||||||
Sbjct: 477 ccgttcaagcttcccatggatctctaaccagcagacgttctgcagcg 431



 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Minus

                                                                       
Query: 466 cttccttctttcagggggtgccaagtccagtacttggggtcttcgctccaggtgatggcc 525
           |||||||||||||| || | |||||||||| |  |||||||||| ||||| ||||| | |
Sbjct: 392 cttccttctttcagaggtttccaagtccagaatctggggtcttcactccaagtgatagac 333

                                                                       
Query: 526 aggcctctagggaacaacatgaagcagttgtgcctggtcctctcgtccacccagtacttc 585
           | |||||| || |||| |||||||||||||| ||| || ||||| |||||||||||||||
Sbjct: 332 aagcctctgggaaacagcatgaagcagttgttcctagttctctcatccacccagtacttc 273

                                                          
Query: 586 tttgttttcccggccaagaagatcccggcggtgacctgatcttccag 632
           ||||||||||| ||||||||||| |||| |  || ||||||||||||
Sbjct: 272 tttgttttccctgccaagaagatgccggtgtagatctgatcttccag 226
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>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score =  157 bits (79), Expect = 6e-35
 Identities = 280/347 (80%)
 Strand = Plus / Plus

                                                                         
Query: 100   tcattcttttgggatgatcttgatgcccttgataaggagccccctcttccactgcccacc 159
             ||||| ||||||||  |||||||| |||||||| || ||||| ||||||||| |||||||
Sbjct: 25696 tcattgttttgggagaatcttgattcccttgattagtagccctctcttccacagcccacc 25755

                                                                         
Query: 160   atcatactcaaacatggagatctcaacctctccattctgccccttgtgcggcttaacctc 219
             |||||||||||||||||| ||||||| |||||| ||||||||||  || |  || |||||
Sbjct: 25756 atcatactcaaacatggatatctcaatctctcccttctgcccctgctgggttttcacctc 25815

                                                                         
Query: 220   cccaaccttgacctgcagccacttccccctgggcttctcctgcaggttctccttctgctg 279
             ||| ||||||| || |||||| |||  ||||  ||||||||  || ||||| ||  ||||
Sbjct: 25816 cccgaccttgagctccagccatttcatcctgatcttctcctcaagattctctttacgctg 25875

                                                                         
Query: 280   ctggatcgtgccgtcggggaacttgagccggaggttcaccggcgtcgaccacccgtaggc 339
             |||||  || || || |||||||||||| | |||||||| ||    ||||||||||| ||
Sbjct: 25876 ctggactgttccatcagggaacttgagctgaaggttcactgggacagaccacccgtatgc 25935

                                                                         
Query: 340   cgggtcgtcgagcttcacctcgaagaagacctcgtaggtgactcctggcgtgagatggga 399
              || ||    ||| | || || ||||  ||||| |||||||||||||| || |||| |||
Sbjct: 25936 aggatcaataagcattacttcaaagagaacctcataggtgactcctggtgtaagatagga 25995

                                                            
Query: 400   cagctccagcttcccttggacctccagccagcagacgttctgcagcg 446
             | | || |||||||| |||| ||| | ||||||||||||||||||||
Sbjct: 25996 ccgttcaagcttcccatggatctctaaccagcagacgttctgcagcg 26042



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                         
Query: 465   ccttccttctttcagggggtgccaagtccagtacttggggtcttcgctccaggtgatggc 524
             ||||||||||||||| || | |||||||||| |  |||||||||| ||||| ||||| | 
Sbjct: 26191 ccttccttctttcagaggtttccaagtccagaatctggggtcttcactccaagtgataga 26250

                                                                         
Query: 525   caggcctctagggaacaacatgaagcagttgtgcctggtcctctcgtccacccagtactt 584
             || |||||| || |||| |||||||||||||| ||| || ||||| ||||||||||||||
Sbjct: 26251 caagcctctgggaaacagcatgaagcagttgttcctagttctctcatccacccagtactt 26310

               
Query: 585   ct 586
             ||
Sbjct: 26311 ct 26312



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 585   ctttgttttcccggccaagaagatcccggcggtgacctgatcttccag 632
             |||||||||||| ||||||||||| |||| |  || ||||||||||||
Sbjct: 26411 ctttgttttccctgccaagaagatgccggtgtagatctgatcttccag 26458
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>dbj|AK102322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090J07, full
           insert sequence
          Length = 944

 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Minus

                                                                       
Query: 466 cttccttctttcagggggtgccaagtccagtacttggggtcttcgctccaggtgatggcc 525
           |||||||||||||| || | |||||||||| |  |||||||||| ||||| ||||| | |
Sbjct: 467 cttccttctttcagaggtttccaagtccagaatctggggtcttcactccaagtgatagac 408

                                                                       
Query: 526 aggcctctagggaacaacatgaagcagttgtgcctggtcctctcgtccacccagtacttc 585
           | |||||| || |||| |||||||||||||| ||| || ||||| |||||||||||||||
Sbjct: 407 aagcctctgggaaacagcatgaagcagttgttcctagttctctcatccacccagtacttc 348

                                                          
Query: 586 tttgttttcccggccaagaagatcccggcggtgacctgatcttccag 632
           ||||||||||| ||||||||||| |||| |  || ||||||||||||
Sbjct: 347 tttgttttccctgccaagaagatgccggtgtagatctgatcttccag 301



 Score =  135 bits (68), Expect = 2e-28
 Identities = 279/348 (80%), Gaps = 1/348 (0%)
 Strand = Plus / Minus

                                                                       
Query: 100 tcattcttttgggatgatcttgatgcccttgataaggagccccctcttccactgcccacc 159
           ||||| ||||||||  |||||||| |||||||| || ||||| ||||||||| |||||||
Sbjct: 853 tcattgttttgggagaatcttgattcccttgattagtagccctctcttccacagcccacc 794

                                                                       
Query: 160 atcatactc-aaacatggagatctcaacctctccattctgccccttgtgcggcttaacct 218
           ||||||||| ||||||||| ||||||| |||||| ||||||||||  || |  || ||| 
Sbjct: 793 atcatactcaaaacatggatatctcaatctctcccttctgcccctgctgggttttcaccc 734

                                                                       
Query: 219 ccccaaccttgacctgcagccacttccccctgggcttctcctgcaggttctccttctgct 278
           |||| ||||||| || |||||| |||  ||||  ||||||||  || ||||| ||  |||
Sbjct: 733 ccccgaccttgagctccagccatttcatcctgatcttctcctcaagattctctttacgct 674

                                                                       
Query: 279 gctggatcgtgccgtcggggaacttgagccggaggttcaccggcgtcgaccacccgtagg 338
           ||||||  || || || |||||||||||| | |||||||| ||    ||||||||||| |
Sbjct: 673 gctggactgttccatcagggaacttgagctgaaggttcactgggacagaccacccgtatg 614

                                                                       
Query: 339 ccgggtcgtcgagcttcacctcgaagaagacctcgtaggtgactcctggcgtgagatggg 398
           | || ||    ||| | || || ||||  ||||| |||||||||||||| || |||| ||
Sbjct: 613 caggatcaataagcattacttcaaagagaacctcataggtgactcctggtgtaagatagg 554

                                                           
Query: 399 acagctccagcttcccttggacctccagccagcagacgttctgcagcg 446
           || | || |||||||| |||| ||| | ||||||||||||||||||||
Sbjct: 553 accgttcaagcttcccatggatctctaaccagcagacgttctgcagcg 506
to top
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0011G08
          Length = 139490

 Score =  133 bits (67), Expect = 8e-28
 Identities = 181/219 (82%)
 Strand = Plus / Plus

                                                                          
Query: 100    tcattcttttgggatgatcttgatgcccttgataaggagccccctcttccactgcccacc 159
              ||||| ||||||||  |||||||| |||||||| || ||||| ||||||||| |||||||
Sbjct: 139173 tcattgttttgggagaatcttgattcccttgattagtagccctctcttccacagcccacc 139232

                                                                          
Query: 160    atcatactcaaacatggagatctcaacctctccattctgccccttgtgcggcttaacctc 219
              |||||||||||||||||| ||||||| |||||| ||||||||||  || |  || |||||
Sbjct: 139233 atcatactcaaacatggatatctcaatctctcccttctgcccctgctgggttttcacctc 139292

                                                                          
Query: 220    cccaaccttgacctgcagccacttccccctgggcttctcctgcaggttctccttctgctg 279
              ||| ||||||| || |||||| |||  ||||  ||||||||  || ||||| ||  ||||
Sbjct: 139293 cccgaccttgagctccagccatttcatcctgatcttctcctcaagattctctttacgctg 139352

                                                     
Query: 280    ctggatcgtgccgtcggggaacttgagccggaggttcac 318
              |||||  || || || |||||||||||| | ||||||||
Sbjct: 139353 ctggactgttccatcagggaacttgagctgaaggttcac 139391
to top
>gb|AC005610.1| Homo sapiens chromosome 5, PAC clone 502L6 (LBNL H156), complete
             sequence
          Length = 223408

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 73    aacaaaacacaaccaaaaccaaa 95
             |||||||||||||||||||||||
Sbjct: 88380 aacaaaacacaaccaaaaccaaa 88402
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>gb|AC010626.6| Homo sapiens chromosome 5 clone CTD-2138K21, complete sequence
          Length = 160312

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 73     aacaaaacacaaccaaaaccaaa 95
              |||||||||||||||||||||||
Sbjct: 143035 aacaaaacacaaccaaaaccaaa 143057
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>dbj|AP006184.1| Sus scrofa CC chemokine receptor genes (CCR9, CXCR6, FYCO1), complete
              cds, clone: 0268F11
          Length = 141824

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 252    gcttctcctgcaggttctccttctgctgctg 282
              |||||||||||||| ||||||||| ||||||
Sbjct: 115254 gcttctcctgcaggctctccttctcctgctg 115284
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>gb|CP000081.1| Leishmania major chromosome 35, complete sequence
          Length = 2090491

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 74     acaaaacacaaccaaaaccaaa 95
              ||||||||||||||||||||||
Sbjct: 901677 acaaaacacaaccaaaaccaaa 901656
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>emb|AL645907.9| Mouse DNA sequence from clone RP23-9N7 on chromosome 11 Contains the 5'
             end of a novel gene, a novel gene, the Clk4 gene for CDC
             like kinase 4, the 5' end of the Col23a1 gene for
             procollagen (type XXIII, alpha 1) and two CpG islands,
             complete sequence
          Length = 219268

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 224   accttgacctgcagccacttcc 245
             ||||||||||||||||||||||
Sbjct: 95793 accttgacctgcagccacttcc 95772
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>gb|DQ369998.1| HIV-1 isolate 04ZASK172B1 from South Africa, complete genome
          Length = 8821

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 253  cttctcctgcaggttctccttctgctgctggatc 286
            ||||| |||| || ||||||||||||||||||||
Sbjct: 8081 cttctgctgctggatctccttctgctgctggatc 8048
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>gb|AC126796.4| Mus musculus BAC clone RP23-384F19 from chromosome 10, complete
             sequence
          Length = 211025

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 73    aacaaaacacaaccaaaacca 93
             |||||||||||||||||||||
Sbjct: 16730 aacaaaacacaaccaaaacca 16710
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>emb|AL162424.20| Human DNA sequence from clone RP11-498E2 on chromosome 9 Contains the 5'
              end of the PTGS1 gene for prostaglandin-endoperoxide
              synthase 1 (prostaglandin G/H synthase and cyclooxygenase),
              the gene for mitochondrial ribosome recycling factor (MRRF)
              (RRF MRFF MTRRF), a novel gene (MGC2734), the LHX6 gene for
              LIM-homeobox protein 6, the 3' end of a novel gene
              (LOC254956) and five CpG islands, complete sequence
          Length = 223020

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 399    acagctccagcttcccttgga 419
              |||||||||||||||||||||
Sbjct: 166761 acagctccagcttcccttgga 166741
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>gb|AC125204.4| Mus musculus BAC clone RP23-237H8 from 10, complete sequence
          Length = 198473

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 73    aacaaaacacaaccaaaacca 93
             |||||||||||||||||||||
Sbjct: 34676 aacaaaacacaaccaaaacca 34696
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>gb|AC009522.11| Homo sapiens 12 BAC RP11-591N1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128666

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 572   ccacccagtacttctttgttttccc 596
             ||||||||| |||||||||||||||
Sbjct: 25354 ccacccagttcttctttgttttccc 25330
to top
>gb|AF355464.1|AF355464 Oryctolagus cuniculus flavin-containing monooxygenase 1 (FMO1) gene,
            exons 0, 1, and 2, and partial cds
          Length = 6970

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 139  ccccctcttccactgcccaccatca 163
            ||||||||||||||| |||||||||
Sbjct: 5710 ccccctcttccactggccaccatca 5734
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>gb|AY085730.1| Arabidopsis thaliana clone 17437 mRNA, complete sequence
          Length = 989

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 311 aggttcaccggcgtcgaccacccgtaggccgggtcgtcgagcttcacctcgaagaagacc 370
           ||||||||||||||   ||| || |||||||| || || |||||||||| |||||  |||
Sbjct: 584 aggttcaccggcgtgtcccatccataggccggatcctctagcttcaccttgaagaccacc 525

                
Query: 371 tcgta 375
           |||||
Sbjct: 524 tcgta 520
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>gb|AC104038.9| Homo sapiens chromosome 11, clone RP11-746C23, complete sequence
          Length = 187648

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    acaaaacacaaccaaaaccaa 94
             |||||||||||||||||||||
Sbjct: 44384 acaaaacacaaccaaaaccaa 44364
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>emb|AL953872.7| Zebrafish DNA sequence from clone CH211-235H23, complete sequence
          Length = 164584

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 261    gcaggttctccttctgctgct 281
              |||||||||||||||||||||
Sbjct: 156586 gcaggttctccttctgctgct 156606
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 318     ccggcgtcgaccacccgtaggccg 341
               |||||||||||||||||| |||||
Sbjct: 3293535 ccggcgtcgaccacccgtgggccg 3293512
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>gb|AC155713.14| Mus musculus 10 BAC RP24-117K18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 156147

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     aaaacacaaccaaaaccaaa 95
              ||||||||||||||||||||
Sbjct: 133543 aaaacacaaccaaaaccaaa 133524
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>ref|XM_870543.1| PREDICTED: Bos taurus similar to Rho guanine nucleotide exchange
            factor (GEF) 17 (LOC540026), partial mRNA
          Length = 3192

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 142  cctcttccactgcccaccat 161
            ||||||||||||||||||||
Sbjct: 2684 cctcttccactgcccaccat 2703
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>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete
             sequence
          Length = 184079

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    catgcatgaaactgatctta 37
             ||||||||||||||||||||
Sbjct: 47803 catgcatgaaactgatctta 47822
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>emb|AJ459965.1|ECA459965 Equus caballus CRISP3 gene for cysteine-rich secretory protein 3 and
             TPX1 gene for testis specific protein 1
          Length = 137520

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    aaatcattcattcttttggg 112
             ||||||||||||||||||||
Sbjct: 91965 aaatcattcattcttttggg 91984
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>ref|XM_806090.1| Trypanosoma cruzi strain CL Brener Unc104-like kinesin
           (Tc00.1047053510687.100) partial mRNA
          Length = 2196

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 494 agtacttggggtcttcgctc 513
           ||||||||||||||||||||
Sbjct: 734 agtacttggggtcttcgctc 753
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>gb|BC059305.1| Xenopus laevis hypothetical protein MGC68950, mRNA (cDNA clone
            MGC:68950 IMAGE:4959212), complete cds
          Length = 4785

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 256  ctcctgcaggttctccttctgctg 279
            ||||||||| ||||||||||||||
Sbjct: 1229 ctcctgcagcttctccttctgctg 1206
to top
>ref|XM_764361.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_177_679_2166)
            partial mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 660  ggcgacgatctcccggagca 679
            ||||||||||||||||||||
Sbjct: 1473 ggcgacgatctcccggagca 1454
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>gb|AC112683.10| Mus musculus chromosome 17, clone RP23-332P1, complete sequence
          Length = 206979

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    catgcatgaaactgatctta 37
             ||||||||||||||||||||
Sbjct: 27804 catgcatgaaactgatctta 27785
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>gb|AC166559.2| Spironucleus vortens clone JGIBAWF-5H13, complete sequence
          Length = 31974

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 72    taacaaaacacaaccaaaaccaaa 95
             |||||||||||||||| |||||||
Sbjct: 28533 taacaaaacacaaccagaaccaaa 28556
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>gb|DQ472026.1| Nautilus macromphalus mitochondrion, complete genome
          Length = 16258

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 73   aacaaaacacaaccaaaacc 92
            ||||||||||||||||||||
Sbjct: 7602 aacaaaacacaaccaaaacc 7621
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>emb|AL445675.9| Human DNA sequence from clone RP11-498M14 on chromosome 1 Contains a CpG
              island, complete sequence
          Length = 171985

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     aaacacaaccaaaaccaaat 96
              ||||||||||||||||||||
Sbjct: 125485 aaacacaaccaaaaccaaat 125504
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>emb|AL365402.17| Human DNA sequence from clone RP11-445K1 on chromosome 1q31.1-31.3
              Contains the 3' end of the gene for DBCCR1-like (DBCCR1L),
              complete sequence
          Length = 190163

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 73     aacaaaacacaaccaaaaccaaatcatt 100
              ||||||||| ||||||||||||| ||||
Sbjct: 183027 aacaaaacaaaaccaaaaccaaaacatt 183054
to top
>gb|AF491081.1| Garmannia chiquita 12S ribosomal RNA gene, partial sequence;
           tRNA-Val gene, complete sequence; and 16S ribosomal RNA
           gene, partial sequence; mitochondrial genes for
           mitochondrial products
          Length = 2069

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  acaaccaaaaccaaatcatt 100
           ||||||||||||||||||||
Sbjct: 639 acaaccaaaaccaaatcatt 658
to top
>emb|AL078477.5|HSDJ259N9 Human DNA sequence from clone RP1-69B10 on chromosome 11p13 Contains a
             pseudogene similar to heterogeneous nuclear
             ribonucleoprotein, the gene for GA17 protein, ESTs, STSs,
             GSSs and a CpG island, complete sequence
          Length = 107652

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   gcttaacctccccaaccttgacct 233
             |||||||||||||| |||||||||
Sbjct: 80040 gcttaacctccccatccttgacct 80063
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>emb|Y07760.1|CAV1GENOM Canine adenovirus type 1 complete genome
          Length = 30536

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   aacctccccaaccttgacct 233
             ||||||||||||||||||||
Sbjct: 26708 aacctccccaaccttgacct 26727
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>gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosome 13, complete sequence
          Length = 182025

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     aacaaaacacaaccaaaacc 92
              ||||||||||||||||||||
Sbjct: 170641 aacaaaacacaaccaaaacc 170660
to top
>gb|AY834753.1| Cystobacter fuscus cystothiazole A gene cluster, complete sequence
          Length = 63876

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   ggatgatcttgatgcccttg 130
             ||||||||||||||||||||
Sbjct: 59668 ggatgatcttgatgcccttg 59687
to top
>dbj|AB187566.1| Murine leukemia virus Graffi GV-1.4 DNA, complete genome
          Length = 8259

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 574  acccagtacttctttgtttt 593
            ||||||||||||||||||||
Sbjct: 4705 acccagtacttctttgtttt 4686
to top
>dbj|AB187565.1| Murine leukemia virus Graffi GV-1.2 DNA, complete genome
          Length = 8319

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 574  acccagtacttctttgtttt 593
            ||||||||||||||||||||
Sbjct: 4706 acccagtacttctttgtttt 4687
to top
>gb|AC109604.8| Mus musculus strain 129Sv/CJ7 clone rp22-298k22, complete sequence
          Length = 139770

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    aacaaaacacaaccaaaacc 92
             ||||||||||||||||||||
Sbjct: 11403 aacaaaacacaaccaaaacc 11384
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>gb|AC016994.8| Homo sapiens BAC clone RP11-19J8 from 2, complete sequence
          Length = 48827

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 521   tggccaggcctctagggaac 540
             ||||||||||||||||||||
Sbjct: 33601 tggccaggcctctagggaac 33620
to top
>gb|AY034137.1| Rattus norvegicus aldehyde dehydrogenase gene, exons 3 through 13 and
            partial cds; nuclear gene for mitochondrial product
          Length = 13815

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 243  tccccctgggcttctcctgcaggt 266
            |||| |||||||||||||||||||
Sbjct: 8220 tccctctgggcttctcctgcaggt 8243
to top
>gb|AF141932.2|AF141932 Rhizobium leguminosarum bv. trifolii bacteriocin gene cluster,
            complete sequence
          Length = 18282

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 617  tgacctgatcttccagcgcg 636
            ||||||||||||||||||||
Sbjct: 6615 tgacctgatcttccagcgcg 6634
to top
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI,
              complete sequence
          Length = 1813164

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    caaccttgacctgcagccac 241
              ||||||||||||||||||||
Sbjct: 187675 caaccttgacctgcagccac 187694
to top
>gb|AC011631.6|AC011631 Homo sapiens, clone RP11-1I20, complete sequence
          Length = 158236

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 73     aacaaaacacaaccaaaaccaaatcatt 100
              ||||||||| ||||||||||||| ||||
Sbjct: 148763 aacaaaacaaaaccaaaaccaaaacatt 148736
to top
>gb|AF019230.1|AF019230 Murine leukemia virus strain SRS 19-6 complete genome
          Length = 8256

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 574  acccagtacttctttgtttt 593
            ||||||||||||||||||||
Sbjct: 4708 acccagtacttctttgtttt 4689
to top
>gb|AC008068.4| Homo sapiens BAC clone RP11-334F17 from 2, complete sequence
          Length = 154036

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 73    aacaaaacacaaccaaaaccaaatcatt 100
             ||||||| ||||||||||||||| ||||
Sbjct: 12268 aacaaaaaacaaccaaaaccaaaacatt 12295
to top
>gb|AC011293.5|AC011293 Homo sapiens BAC clone RP11-75F5 from Y, complete sequence
          Length = 159722

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     aaacacaaccaaaaccaaat 96
              ||||||||||||||||||||
Sbjct: 128889 aaacacaaccaaaaccaaat 128908
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 337     ggccgggtcgtcgagcttcacctcgaag 364
               |||||||||||||||||| ||| |||||
Sbjct: 5732971 ggccgggtcgtcgagcttgaccccgaag 5732998
to top
>gb|AE004446.1| Pseudomonas aeruginosa PAO1, section 7 of 529 of the complete genome
          Length = 19762

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 629  ccagcgcggctacgtcggtgacat 652
            ||||||||||| ||||||||||||
Sbjct: 4073 ccagcgcggcttcgtcggtgacat 4050
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>gb|AC087653.6| Homo sapiens chromosome 11, clone RP1-259N9, complete sequence
          Length = 138141

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   gcttaacctccccaaccttgacct 233
             |||||||||||||| |||||||||
Sbjct: 35336 gcttaacctccccatccttgacct 35359
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 659     cggcgacgatctcccggagc 678
               ||||||||||||||||||||
Sbjct: 2699026 cggcgacgatctcccggagc 2699045
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>gb|M60937.1|AECE2AA Canine adenovirus type 1 putative ORF1 (p-VIII) gene, partial cds;
            and putative ORF2 (E3), putative ORF3 (E3), and fiber
            protein genes, complete cds
          Length = 3317

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 214  aacctccccaaccttgacct 233
            ||||||||||||||||||||
Sbjct: 2174 aacctccccaaccttgacct 2193
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>emb|AL954697.15| Zebrafish DNA sequence from clone CH211-286K11 in linkage group 25,
             complete sequence
          Length = 134798

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    caaaaccaaatcattcattc 105
             ||||||||||||||||||||
Sbjct: 58572 caaaaccaaatcattcattc 58591
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>emb|AJ328806.1|HSA328806 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-MD24R
          Length = 748

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 259 ctgcaggttctccttctgct 278
           ||||||||||||||||||||
Sbjct: 297 ctgcaggttctccttctgct 316
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>ref|NM_210773.1| Eremothecium gossypii AFL131Wp (AFL131W), mRNA
          Length = 3570

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  caaccttgacctgcagccac 241
            ||||||||||||||||||||
Sbjct: 1020 caaccttgacctgcagccac 1039
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>gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 184984

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     aacaaaacacaaccaaaacc 92
              ||||||||||||||||||||
Sbjct: 173601 aacaaaacacaaccaaaacc 173620
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>gb|AC153920.5| Mus musculus 10 BAC RP23-82M21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 129551

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    aaaacacaaccaaaaccaaa 95
             ||||||||||||||||||||
Sbjct: 61687 aaaacacaaccaaaaccaaa 61668
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>gb|AC078897.20| Mus musculus strain C57BL/6J chromosome 3 clone rp23-105k2, complete
              sequence
          Length = 200088

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 74     acaaaacacaaccaaaacca 93
              ||||||||||||||||||||
Sbjct: 110292 acaaaacacaaccaaaacca 110273
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 354     tcacctcgaagaagacctcgtaggtgac 381
               |||||||||||||| |||||| ||||||
Sbjct: 1001529 tcacctcgaagaaggcctcgtcggtgac 1001502
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>gb|U55001.1|CAU55001 Canine adenovirus type 1 E1A protein, small T-antigen, large T-antigen,
             protein IX, IVa2 protein, DNA polymerase, pTP, 52-55K
             protein, pIIIa, penton base protein, pVII protein, pV
             protein, Mu peptide precursor, pVI protein, viral protein
             II, endoproteinase, E2A-DBP, 100 kD protein, L4-22kD
             protein, L4-33 kD protein, pVIII, virion component IV,
             U-exon, E4 orf5, E4 orf4, E4 orf3, E4 orf2, and E4 orf1
             genes, complete cds
          Length = 30288

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   aacctccccaaccttgacct 233
             ||||||||||||||||||||
Sbjct: 26425 aacctccccaaccttgacct 26444
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>emb|AL845156.5| Mouse DNA sequence from clone RP23-340F21 on chromosome 2, complete
            sequence
          Length = 118716

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 225  ccttgacctgcagccacttc 244
            ||||||||||||||||||||
Sbjct: 4697 ccttgacctgcagccacttc 4716


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,002,415
Number of Sequences: 3902068
Number of extensions: 6002415
Number of successful extensions: 142571
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142073
Number of HSP's gapped (non-prelim): 491
length of query: 684
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 661
effective length of database: 17,143,297,704
effective search space: 11331719782344
effective search space used: 11331719782344
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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