ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal24j17 |
|---|---|
| Clone Library Name | barley_pub |
>DRP1C_ARATH (Q8LF21) Dynamin-related protein 1C (Dynamin-like protein C)| (Dynamin-like protein 5) (Dynamin-like protein DLP1) Length = 614 Score = 199 bits (507), Expect = 5e-51 Identities = 101/141 (71%), Positives = 119/141 (84%), Gaps = 4/141 (2%) Frame = -3 Query: 688 RKTVIRLVDMEASYLTVEFFRKLPTEPDKGANN--NTPAN--DRYQDNHLRRIGSNVSSY 521 RKTV+RLVDME+SYLTVEFFRKL EP+K N N PA D Y DNH R+IGSNVS+Y Sbjct: 474 RKTVLRLVDMESSYLTVEFFRKLHLEPEKEKPNPRNAPAPNADPYSDNHFRKIGSNVSAY 533 Query: 520 INMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDS 341 INMVCDTLRN++PKAVV+CQV+EAKR+LLN FYA VG KEK++L AMLDEDP LME+R + Sbjct: 534 INMVCDTLRNSLPKAVVYCQVREAKRSLLNFFYAQVGRKEKEKLGAMLDEDPQLMERRGT 593 Query: 340 LVKKLELYKSARNEIDSVAWK 278 L K+LELYK AR++ID+VAWK Sbjct: 594 LAKRLELYKQARDDIDAVAWK 614
>DRP1A_ARATH (P42697) Dynamin-related protein 1A (Dynamin-like protein A)| (Dynamin-like protein 1) Length = 610 Score = 176 bits (446), Expect = 6e-44 Identities = 80/136 (58%), Positives = 114/136 (83%) Frame = -3 Query: 688 RKTVIRLVDMEASYLTVEFFRKLPTEPDKGANNNTPANDRYQDNHLRRIGSNVSSYINMV 509 +K ++LVDME SYLTV+FFRKLP + +KG N DRY D++LRRIGSNV SY+NMV Sbjct: 473 KKATLQLVDMECSYLTVDFFRKLPQDVEKGGNPTHSIFDRYNDSYLRRIGSNVLSYVNMV 532 Query: 508 CDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKK 329 C LRN+IPK++V+CQV+EAKR+LL+ F+A +G+ + K+LS++L+EDPA+ME+R ++ K+ Sbjct: 533 CAGLRNSIPKSIVYCQVREAKRSLLDHFFAELGTMDMKRLSSLLNEDPAIMERRSAISKR 592 Query: 328 LELYKSARNEIDSVAW 281 LELY++A++EID+VAW Sbjct: 593 LELYRAAQSEIDAVAW 608
>DRP1B_ARATH (Q84XF3) Dynamin-related protein 1B (Dynamin-like protein B)| Length = 610 Score = 171 bits (433), Expect = 2e-42 Identities = 80/136 (58%), Positives = 107/136 (78%) Frame = -3 Query: 688 RKTVIRLVDMEASYLTVEFFRKLPTEPDKGANNNTPANDRYQDNHLRRIGSNVSSYINMV 509 RK + LVDME+ YLTVEFFRKLP + +KG N DRY D +LRRIGSNV SY+NMV Sbjct: 473 RKATLLLVDMESGYLTVEFFRKLPQDSEKGGNPTHSIFDRYNDAYLRRIGSNVLSYVNMV 532 Query: 508 CDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKK 329 C LRN+IPK++V+CQV+EAKR+LL+ F+ +G KE +LS +LDEDPA+ ++R S+ K+ Sbjct: 533 CAGLRNSIPKSIVYCQVREAKRSLLDIFFTELGQKEMSKLSKLLDEDPAVQQRRTSIAKR 592 Query: 328 LELYKSARNEIDSVAW 281 LELY+SA+ +I++VAW Sbjct: 593 LELYRSAQTDIEAVAW 608
>DRP1E_ARATH (Q9FNX5) Dynamin-related protein 1E (Dynamin-like protein E)| (Dynamin-like protein 4) (Dynamin-like protein DLP2) Length = 624 Score = 169 bits (428), Expect = 7e-42 Identities = 85/144 (59%), Positives = 110/144 (76%), Gaps = 8/144 (5%) Frame = -3 Query: 688 RKTVIRLVDMEASYLTVEFFRKLPTEPDKGANNN-----TPAN---DRYQDNHLRRIGSN 533 +K+VIRLVDME++YLT EFFRKLP E ++ N+ +P++ D+Y D H RRI SN Sbjct: 479 KKSVIRLVDMESAYLTAEFFRKLPQEIERPVTNSKNQTASPSSATLDQYGDGHFRRIASN 538 Query: 532 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 353 VS+Y+NMV DTLRNTIPKA V+CQV++AK LLN FY+ + +E KQL +LDEDPALM+ Sbjct: 539 VSAYVNMVSDTLRNTIPKACVYCQVRQAKLALLNYFYSQISKREGKQLGQLLDEDPALMD 598 Query: 352 KRDSLVKKLELYKSARNEIDSVAW 281 +R K+LELYK AR+EID+VAW Sbjct: 599 RRLECAKRLELYKKARDEIDAVAW 622
>DRP1D_ARATH (Q8S3C9) Dynamin-related protein 1D (Dynamin-like protein D)| (Dynamin-like protein DLP3) Length = 612 Score = 159 bits (402), Expect = 8e-39 Identities = 79/136 (58%), Positives = 102/136 (75%), Gaps = 1/136 (0%) Frame = -3 Query: 685 KTVIRLVDMEASYLTVEFFRKLPTEPDK-GANNNTPANDRYQDNHLRRIGSNVSSYINMV 509 K+V+RLVDME+SYLTV+FFRKL E ++ T A D+Y D H R+I SNV++YI MV Sbjct: 475 KSVLRLVDMESSYLTVDFFRKLHVESQNMSLSSPTSAIDQYGDGHFRKIASNVAAYIKMV 534 Query: 508 CDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKK 329 +TL NTIPKAVVHCQV++AK +LLN FYA + + K+L +LDE+PALME+R K+ Sbjct: 535 AETLVNTIPKAVVHCQVRQAKLSLLNYFYAQISQSQGKRLGQLLDENPALMERRMQCAKR 594 Query: 328 LELYKSARNEIDSVAW 281 LELYK AR+EID+ W Sbjct: 595 LELYKKARDEIDAAVW 610
>DRP2B_ARATH (Q9LQ55) Dynamin-2B (EC 3.6.5.5) (Dynamin-related protein 2B)| (Dynamin-like protein 3) Length = 920 Score = 55.5 bits (132), Expect = 2e-07 Identities = 24/89 (26%), Positives = 50/89 (56%) Frame = -3 Query: 562 DNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSA 383 + LR + V Y+ V ++L +PKAVV CQV+++K ++LN+ Y+ + + +++ + Sbjct: 734 EEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKSKEDMLNQLYSSISAIGNERIES 793 Query: 382 MLDEDPALMEKRDSLVKKLELYKSARNEI 296 ++ ED + +RD K+ L ++ Sbjct: 794 LIQEDQNVKRRRDRYQKQSSLLSKLTRQL 822
>DRP2A_ARATH (Q9SE83) Dynamin-2A (EC 3.6.5.5) (Dynamin-related protein 2A)| (Dynamin-like protein 6) Length = 914 Score = 55.1 bits (131), Expect = 2e-07 Identities = 24/89 (26%), Positives = 50/89 (56%) Frame = -3 Query: 562 DNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSA 383 + LR + V Y+ V ++L +PKAVV CQV++AK ++LN+ Y+ + + +++ + Sbjct: 727 EEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISAIGNERIES 786 Query: 382 MLDEDPALMEKRDSLVKKLELYKSARNEI 296 ++ ED + +R+ K+ L ++ Sbjct: 787 LIQEDQNVKRRRERYQKQSSLLSKLTRQL 815
>DYN2_RAT (P39052) Dynamin-2 (EC 3.6.5.5)| Length = 870 Score = 48.9 bits (115), Expect = 1e-05 Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 1/126 (0%) Frame = -3 Query: 658 EASYLTVEFF-RKLPTEPDKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIP 482 +AS+L + K E + GA NT + D + + I + V SY+ ++ ++R+ +P Sbjct: 617 KASFLRAGVYPEKDQAENEDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMP 676 Query: 481 KAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARN 302 K ++H + K + + A++ S + S++++E ++RD +++ K A N Sbjct: 677 KTIMHLMINNTKAFIHHELLAYLYSSADQ--SSLMEESAEQAQRRDDMLRMYHALKEALN 734 Query: 301 EIDSVA 284 I ++ Sbjct: 735 IIGDIS 740
>DYN2_MOUSE (P39054) Dynamin-2 (EC 3.6.5.5) (Dynamin UDNM)| Length = 870 Score = 48.9 bits (115), Expect = 1e-05 Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 1/126 (0%) Frame = -3 Query: 658 EASYLTVEFF-RKLPTEPDKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIP 482 +AS+L + K E + GA NT + D + + I + V SY+ ++ ++R+ +P Sbjct: 617 KASFLRAGVYPEKDQAENEDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMP 676 Query: 481 KAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARN 302 K ++H + K + + A++ S + S++++E ++RD +++ K A N Sbjct: 677 KTIMHLMINNTKAFIHHELLAYLYSSADQ--SSLMEESAEQAQRRDDMLRMYHALKEALN 734 Query: 301 EIDSVA 284 I ++ Sbjct: 735 IIGDIS 740
>DYN2_HUMAN (P50570) Dynamin-2 (EC 3.6.5.5)| Length = 870 Score = 48.5 bits (114), Expect = 2e-05 Identities = 29/126 (23%), Positives = 63/126 (50%), Gaps = 1/126 (0%) Frame = -3 Query: 658 EASYLTVEFF-RKLPTEPDKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIP 482 +AS+L + K E + GA NT + D + + I + V SY+ ++ ++R+ +P Sbjct: 617 KASFLRAGVYPEKDQAENEDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMP 676 Query: 481 KAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARN 302 K ++H + K + + A++ S + S++++E ++RD +++ K A N Sbjct: 677 KTIMHLMINNTKAFIHHELLAYLYSSADQ--SSLMEESADQAQRRDDMLRMYHALKEALN 734 Query: 301 EIDSVA 284 I ++ Sbjct: 735 IIGDIS 740
>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)| Length = 848 Score = 40.8 bits (94), Expect = 0.004 Identities = 22/103 (21%), Positives = 50/103 (48%) Frame = -3 Query: 616 TEPDKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNL 437 TE D+ + D + + I + V SY++++ +R+ IPK ++H + K + Sbjct: 628 TENDENGQAENFSMDPQLERQVETIRNLVDSYMSIINKCIRDLIPKTIMHLMINNVKDFI 687 Query: 436 LNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSA 308 + A + S E + + +++E ++RD +++ + K A Sbjct: 688 NSELLAQLYSSEDQ--NTLMEESVEQAQRRDEMLRMYQALKEA 728
>DYN3_HUMAN (Q9UQ16) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)| Length = 859 Score = 40.4 bits (93), Expect = 0.005 Identities = 23/114 (20%), Positives = 53/114 (46%) Frame = -3 Query: 625 KLPTEPDKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAK 446 K E D+ + D + + I + V SY++++ +R+ IPK ++H + K Sbjct: 625 KSVAENDENGQAENFSMDPQLERQVETIRNLVDSYMSIINKCIRDLIPKTIMHLMINNVK 684 Query: 445 RNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSVA 284 + + A + S E + + +++E ++RD +++ + K A I ++ Sbjct: 685 DFINSELLAQLYSSEDQ--NTLMEESAEQAQRRDEMLRMYQALKEALGIIGDIS 736
>DYN1_CAEEL (P39055) Dynamin (EC 3.6.5.5)| Length = 830 Score = 38.5 bits (88), Expect = 0.020 Identities = 22/96 (22%), Positives = 46/96 (47%) Frame = -3 Query: 574 DRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKK 395 D + + I + V SY+ ++ T+++ +PKAV+H V + + + AH+ + Sbjct: 646 DPQLERQVETIRNLVDSYMRIITKTIKDLVPKAVMHLIVNQTGEFMKDELLAHL--YQCG 703 Query: 394 QLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 287 A+++E +KR+ +++ K A I V Sbjct: 704 DTDALMEESQIEAQKREEMLRMYHACKEALRIISEV 739
>DYN1_HUMAN (Q05193) Dynamin-1 (EC 3.6.5.5)| Length = 864 Score = 38.5 bits (88), Expect = 0.020 Identities = 21/107 (19%), Positives = 54/107 (50%) Frame = -3 Query: 607 DKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNR 428 + G+++ + D + + I + V SY+ +V T+R+ +PK ++H + K + + Sbjct: 641 ENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSE 700 Query: 427 FYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 287 A++ S + + +++E ++RD +++ K A + I ++ Sbjct: 701 LLANLYSCGDQ--NTLMEESAEQAQRRDEMLRMYHALKEALSIIGNI 745
>DYN1_MOUSE (P39053) Dynamin-1 (EC 3.6.5.5)| Length = 867 Score = 38.1 bits (87), Expect = 0.026 Identities = 21/107 (19%), Positives = 53/107 (49%) Frame = -3 Query: 607 DKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNR 428 + G+++ + D + + I + V SY+ +V T+R+ +PK ++H + K + + Sbjct: 641 ENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSE 700 Query: 427 FYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 287 A++ S + + +++E ++RD +++ K A + I + Sbjct: 701 LLANLYSCGDQ--NTLMEESAEQAQRRDEMLRMYHALKEALSIIGDI 745
>DYN1_RAT (P21575) Dynamin-1 (EC 3.6.5.5) (D100) (Dynamin, brain) (B-dynamin)| Length = 851 Score = 38.1 bits (87), Expect = 0.026 Identities = 21/107 (19%), Positives = 53/107 (49%) Frame = -3 Query: 607 DKGANNNTPANDRYQDNHLRRIGSNVSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNR 428 + G+++ + D + + I + V SY+ +V T+R+ +PK ++H + K + + Sbjct: 641 ENGSDSFMHSMDPQLERQVETIRNLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIFSE 700 Query: 427 FYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYKSARNEIDSV 287 A++ S + + +++E ++RD +++ K A + I + Sbjct: 701 LLANLYSCGDQ--NTLMEESAEQAQRRDEMLRMYHALKEALSIIGDI 745
>DYN_DROME (P27619) Dynamin (EC 3.6.5.5) (dDyn) (Protein shibire)| Length = 877 Score = 37.0 bits (84), Expect = 0.057 Identities = 28/136 (20%), Positives = 62/136 (45%), Gaps = 2/136 (1%) Frame = -3 Query: 685 KTVIRLVDMEASYLTVEFFRKLPTEPDKG--ANNNTPANDRYQDNHLRRIGSNVSSYINM 512 +TV + +AS+L + + + G + + ++D + + I + V SY+ + Sbjct: 604 ETVEDVESWKASFLRAGVYPEKQETQENGDESASEESSSDPQLERQVETIRNLVDSYMKI 663 Query: 511 VCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVK 332 V T R+ +PKA++ + AK + AH+ + + + M++E +R+ +++ Sbjct: 664 VTKTTRDMVPKAIMMLIINNAKDFINGELLAHLYASGDQ--AQMMEESAESATRREEMLR 721 Query: 331 KLELYKSARNEIDSVA 284 K A I V+ Sbjct: 722 MYRACKDALQIIGDVS 737
>YB68_SCHPO (Q09748) Dynamin-like protein C12C2.08| Length = 781 Score = 34.7 bits (78), Expect = 0.28 Identities = 19/82 (23%), Positives = 40/82 (48%) Frame = -3 Query: 532 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 353 ++SY N+ + + +PK ++H V +K + NR + + ++ +L ED + Sbjct: 701 ITSYFNLTRKIIIDQVPKVIMHLLVNASKDAIQNRLVSKLYRED--FFDTLLIEDENVKS 758 Query: 352 KRDSLVKKLELYKSARNEIDSV 287 +R+ + L +Y A I +V Sbjct: 759 EREKCERLLSVYNQANKIISTV 780
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 34.7 bits (78), Expect = 0.28 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +1 Query: 217 RYYKRSICSSHEQS--IRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 369 R R +C QS R I++ PS+S S+RT P G P SP T G Sbjct: 1618 RAVARQVCEQLIQSHMARYTAILNQIPSQSSSIRTIQGPPGEPGRPGSPGTPG 1670
>DRP3A_ARATH (Q8S944) Dynamin-related protein 3A (Dynamin-like protein 2)| (Dynamin-like protein 2a) Length = 808 Score = 34.7 bits (78), Expect = 0.28 Identities = 21/80 (26%), Positives = 37/80 (46%) Frame = -3 Query: 526 SYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKR 347 SY ++V + +++PKA++H V KR L N F + + ML E + KR Sbjct: 679 SYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNVFIKKL--YRENLFEEMLQEPDEIAVKR 736 Query: 346 DSLVKKLELYKSARNEIDSV 287 + L + + A +D + Sbjct: 737 KRTQETLHVLQQAYRTLDEL 756
>DRP3B_ARATH (Q8LFT2) Dynamin-related protein 3B (Dynamin-like protein 2b)| Length = 780 Score = 33.9 bits (76), Expect = 0.48 Identities = 21/82 (25%), Positives = 38/82 (46%) Frame = -3 Query: 532 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALME 353 + SY ++V + + +PKA++H V KR L N F + + + +L E L Sbjct: 661 LKSYYDIVRKNVEDLVPKAIMHFLVNYTKRELHNVFIEKL--YRENLIEELLKEPDELAI 718 Query: 352 KRDSLVKKLELYKSARNEIDSV 287 KR + L + + A +D + Sbjct: 719 KRKRTQETLRILQQANRTLDEL 740
>SFRS1_ARATH (O22315) Pre-mRNA-splicing factor SF2 (SR1 protein)| Length = 303 Score = 33.5 bits (75), Expect = 0.63 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = +1 Query: 190 KAYAKRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 369 + Y R + R R S +S + +S SRSRS SSR +P+ ++R Sbjct: 193 REYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRS 252 Query: 370 PRPASRS 390 P P S+S Sbjct: 253 PGPRSKS 259
>VPS1_YEAST (P21576) Vacuolar sorting protein 1| Length = 704 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Frame = -3 Query: 532 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRN----LLNRFYAHVGSKEKKQLSAMLDEDP 365 +SSY ++V T+ + IPKA++ + ++K + LL + Y K+ + + E+ Sbjct: 625 ISSYFSIVKRTIADIIPKALMLKLIVKSKTDIQKVLLEKLYG------KQDIEELTKEND 678 Query: 364 ALMEKRDSLVKKLELYKSARNEIDSV 287 +++R K +E+ ++A + SV Sbjct: 679 ITIQRRKECKKMVEILRNASQIVSSV 704
>ANT1_ONCVO (P21249) Major antigen (Myosin-like antigen)| Length = 2022 Score = 32.7 bits (73), Expect = 1.1 Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 15/126 (11%) Frame = -3 Query: 628 RKLPTEPDKGANNNTPANDRY-------QDNHLRRIGSNVSSYINMVCDTLR---NTIPK 479 RKL TE +K T +RY +DNH ++I S +N + D LR N + Sbjct: 926 RKLQTEIEKVRKETTTVQERYHIEWDEERDNHQKKIDS-----MNALIDELRSKLNDAER 980 Query: 478 AVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYK----- 314 A+ Q +++ N + +L + DE L+ R K++ Y Sbjct: 981 AMADLQNRDSILERENNDWKEKSDALNMELDRLRDE---LLSVRRDAEKEINRYNTDLQT 1037 Query: 313 SARNEI 296 +ARNEI Sbjct: 1038 AARNEI 1043
>WOX3A_MAIZE (Q70UV1) WUSCHEL-related homeobox 3A (Narrow sheath protein 1)| Length = 262 Score = 32.7 bits (73), Expect = 1.1 Identities = 23/88 (26%), Positives = 38/88 (43%) Frame = +1 Query: 202 KRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPA 381 K ER+ +R +C+ H+Q Q T APASS + ++ + + Sbjct: 61 KARERQRLRRRLCARHQQQYAQQQA------------TAAAPASSPNSSATVPSLAAGGS 108 Query: 382 SRSAAFSLCFLHAHRNG*AGFFLPPSLG 465 S ++ LH H++ A F+P LG Sbjct: 109 SAGVHPAVMQLHHHQHPYATNFMPHQLG 136
>ECI1_YEAST (Q05871) 3,2-trans-enoyl-CoA isomerase (EC 5.3.3.8) (Dodecenoyl-CoA| isomerase) (Delta(3),delta(2)-enoyl-CoA isomerase) (D3,D2-enoyl-CoA isomerase) Length = 280 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = +1 Query: 376 PASRSAAFSLCFLHAHRNG*AGFFLPPSLGSARLLSESCSSMYRKPC*CKMIHSIRFFED 555 P+S + AF+ L R G +LP LG +LL + + K ++ S++++ D Sbjct: 202 PSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHIDAFNKANSVEVNESLKYWVD 261 Query: 556 GYP 564 G P Sbjct: 262 GEP 264
>COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1796 Score = 32.3 bits (72), Expect = 1.4 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = +1 Query: 217 RYYKRSICSSHEQS--IRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 369 R R +C QS R I++ PS S S+RT P G P SP G Sbjct: 1617 RSVARQVCEQLIQSHMARYTAILNQIPSHSSSIRTVQGPPGEPGRPGSPGAPG 1669
>WAPL_DROME (Q9W517) Protein wings apart-like (Protein parallel sister| chromatids) Length = 1741 Score = 32.0 bits (71), Expect = 1.8 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 8/98 (8%) Frame = +2 Query: 209 WSVATTNVLSVPATNSPSDQIRSFPCNRVDLVPCGLVQLQLLHE--------GIPLLHQR 364 + + + ++ P+ S++ R LVP V + L H G LL QR Sbjct: 1412 YRLCSRQIMLHPSDGGGSNKEHPGVAMRELLVPVLKVLINLTHTFNEAQPSLGAELLGQR 1471 Query: 365 GVLVQHRAQLLFLFASYMRIETVEQVSFCLLHLAVHDC 478 G +V+ +LL L A+Y+ + V ++S +L L ++ C Sbjct: 1472 GDVVETSFRLLLLSANYIPDQCVFELSILVLTLLINLC 1509
>CN044_MOUSE (Q8CB59) Protein C14orf44 homolog| Length = 589 Score = 31.6 bits (70), Expect = 2.4 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 4/84 (4%) Frame = +1 Query: 184 VYKAYAKRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPST 363 +YKA+ KR R R ++ R+ + + S + R+C A + G S T Sbjct: 377 LYKAFQKRAAERRETR-------ETTRNKPFLLRTANLSHTPRSCDAATAGGGKKSPQPT 429 Query: 364 RGPRPASRS----AAFSLCFLHAH 423 P P SRS A+FS L H Sbjct: 430 ATPLPRSRSLSGLASFSANTLPVH 453
>MAN1_YEAST (P22855) Alpha-mannosidase (EC 3.2.1.24) (Alpha-D-mannoside| mannohydrolase) Length = 1083 Score = 31.6 bits (70), Expect = 2.4 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%) Frame = +2 Query: 206 EWSVATTNVLSVPATNSPSDQIRSF-----PCNRVDLVPCGLVQLQLLHEGIPLLH 358 EW A T+VL + PS QI C D++P +++ +E +P+LH Sbjct: 592 EWIAAKTSVLYPDSYKYPSKQINELWENVLLCQFHDVLPGSCIEMVYKYEAVPMLH 647
>CUTL2_MOUSE (P70298) Homeobox protein cut-like 2 (Homeobox protein Cux-2)| (Cut-like 2) Length = 1426 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/50 (42%), Positives = 23/50 (46%) Frame = +1 Query: 232 SICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPA 381 S C S E S +IS S L TC +PA S P SPS G PA Sbjct: 1326 SSCCSLEGPPNSPSVIS-----SPDLTTCVSPAPSSSAPISPSLPGAPPA 1370
>PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phosphatase (EC| 3.1.3.16) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory protein) Length = 1696 Score = 31.6 bits (70), Expect = 2.4 Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +1 Query: 295 RSRSLRTCTAPASSRGNPSSPSTR-GPRPASRSAAFSLC 408 R R R +A ASS +PSS S+ G PAS SA+ SLC Sbjct: 104 RGRLKRNLSAAASSSSSPSSASSAAGGLPASCSASASLC 142
>WOX3B_MAIZE (Q6S3I3) WUSCHEL-related homeobox 3B (Narrow sheath protein 2)| Length = 265 Score = 31.2 bits (69), Expect = 3.1 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%) Frame = +1 Query: 202 KRMERRYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPA 381 K ER+ +R +C+ H+Q Q ++ + T APASS P+S +T PA Sbjct: 61 KARERQRLRRRLCARHQQ----------QYAQQQQQATAAAPASS---PNSSATLLAPPA 107 Query: 382 SRSAAF-----SLCFLHAHRNG*AGFFLPPSLG 465 + ++ ++ LH H + A F P LG Sbjct: 108 AGGSSAPCVHPAVMQLHHHHHPYATSFSMPHLG 140
>ATG23_KLULA (Q6CWA7) Autophagy-related protein 23| Length = 426 Score = 30.8 bits (68), Expect = 4.1 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 8/120 (6%) Frame = -3 Query: 649 YLTVEFFRKLPTEPDKGANNN-----TPANDRYQDNHLRRIGSNVS---SYINMVCDTLR 494 YL + ++ E AN N TP + ++ L R + +N D L+ Sbjct: 126 YLLESYVNEVGIENTTLANTNGNHEETPNSSKFTREQLLRNARKLKLCQEQVNSEIDQLK 185 Query: 493 NTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELYK 314 + I + E RN++N Y +K+++ + E+ + +R+ ++KKL L K Sbjct: 186 SLISQY-------ERDRNVINDEYNRTTELIQKEVNTLSREEDKINSQREKILKKLGLLK 238
>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) Length = 659 Score = 30.8 bits (68), Expect = 4.1 Identities = 23/58 (39%), Positives = 26/58 (44%) Frame = +1 Query: 217 RYYKRSICSSHEQSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPASRS 390 RY + H S RS S+ PSRSRSL SR + SPS R SRS Sbjct: 463 RYRRGGRGLRHHSSSRSRSSWSLSPSRSRSL------TRSRSHSPSPSQSRSRSRSRS 514
>EXOF_RHIME (Q02728) Exopolysaccharide production protein exoF precursor| Length = 421 Score = 30.8 bits (68), Expect = 4.1 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 10/83 (12%) Frame = -3 Query: 496 RNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQ---LSAMLD-------EDPALMEKR 347 R+TIP V +A++ LL+ A + S++K+Q L A+ D E AL +K Sbjct: 203 RDTIPMPEELKNVPDAEK-LLDSETALMESRDKRQKRQLDALADLRSLLQSEIEALAKKA 261 Query: 346 DSLVKKLELYKSARNEIDSVAWK 278 ++ ++LEL R+++DS+A K Sbjct: 262 ETQARQLELATEDRDKVDSLAEK 284
>DOCK4_HUMAN (Q8N1I0) Dedicator of cytokinesis protein 4| Length = 1966 Score = 30.4 bits (67), Expect = 5.3 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 253 QSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRP 378 QS SD++ +MQPS S S + T AS S+PS+ P Sbjct: 1660 QSESSDEVFNMQPSPSTSSLSSTHSASPNVTSSAPSSARASP 1701
>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)| Length = 1157 Score = 30.4 bits (67), Expect = 5.3 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Frame = -2 Query: 524 LHQHGLRYIEEHDSESSRALPSEGGKKKPAQPFLC--ACRKQREKAAERDAGRGPRVDGE 351 LH G+RY E S AL SE A+ R++RE+ ER+ R + E Sbjct: 239 LHLSGVRYPPELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADRERE 298 Query: 350 EGFPREEAGAVQVRKERDR 294 + RE + KER+R Sbjct: 299 KEREREREKEREQEKERER 317
>COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1888 Score = 30.4 bits (67), Expect = 5.3 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +1 Query: 217 RYYKRSICSSHEQS--IRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRG 369 R R +C Q R + I++ PS+S S RT P G P +P +G Sbjct: 1627 RAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQG 1679
>DOCK4_MOUSE (P59764) Dedicator of cytokinesis protein 4| Length = 1978 Score = 30.4 bits (67), Expect = 5.3 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 253 QSIRSDQIISMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRP 378 QS SD++ +MQPS S S + T AS S+PS+ P Sbjct: 1669 QSESSDEVFNMQPSPSTSSLSSTHSASPNVTSSAPSSARASP 1710
>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor| 9G8) Length = 238 Score = 30.0 bits (66), Expect = 7.0 Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = +1 Query: 214 RRYYKRSICSSHEQSIRSDQIISMQPSRSRSL-RTCTAPASSRGNPSSPSTRGPRPASRS 390 RR S+ S SI+ + PSRSRS R+ + P SSR SPS + R S S Sbjct: 169 RRSRSASLRRSRSGSIKGSRYFQ-SPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGS 227
>DNM1L_BRARE (Q7SXN5) Dynamin-1-like protein (EC 3.6.5.5)| Length = 691 Score = 30.0 bits (66), Expect = 7.0 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%) Frame = -3 Query: 532 VSSYINMVCDTLRNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQ-LSAMLDEDPALM 356 + SY +V +++++PKAV+H V K +L + VG K L +L E + Sbjct: 606 IKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSLQSEL---VGQLYKPALLDDLLTESEDMA 662 Query: 355 EKRDSLVKKLELYKSARNEIDSV 287 ++R+ L+ + A I + Sbjct: 663 QRRNEAADMLKALQKASQVIAEI 685
>IF140_HUMAN (Q96RY7) Intraflagellar transport 140 homolog (WD and| tetratricopeptide repeats protein 2) Length = 1462 Score = 30.0 bits (66), Expect = 7.0 Identities = 15/73 (20%), Positives = 34/73 (46%) Frame = -3 Query: 496 RNTIPKAVVHCQVKEAKRNLLNRFYAHVGSKEKKQLSAMLDEDPALMEKRDSLVKKLELY 317 R + + + C +++ +L + Y G+K K + + D + S+ ++ E+Y Sbjct: 1188 RRELLEQIADCCMRQGSYHLATKKYTQAGNKLKAMRALLKSGDTEKITFFASVSRQKEIY 1247 Query: 316 KSARNEIDSVAWK 278 A N + S+ W+ Sbjct: 1248 IMAANYLQSLDWR 1260
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 30.0 bits (66), Expect = 7.0 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = +1 Query: 280 SMQPSRSRSLRTCTAPASSRGNPSSPSTRGPRPASRSAAF 399 S P+ S S R +P RG P +PS+ GP PAS ++F Sbjct: 942 STPPAPSSSGRLTPSP---RGGPFNPSSGGPLPASSPSSF 978
>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel| [Contains: Glutamic acid-rich protein (GARP); Cyclic-nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (Cyclic nucleotide-gated cation channel modulatory subunit)] Length = 1394 Score = 30.0 bits (66), Expect = 7.0 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = -2 Query: 497 EEHDSESSRALPSEGGKKKPAQPFLCACRKQREKAAERDAGRGPRVDGEEGFPREEAGAV 318 EE + E R E G+KK + K+ E+ E++ G + EEG +EE Sbjct: 383 EEKEEEEGREKEEEEGEKKEEE----GREKEEEEGGEKEDEEGREKEEEEGRGKEEEEGG 438 Query: 317 QVRKERDR 294 + +E R Sbjct: 439 EKEEEEGR 446
>K0179_HUMAN (Q14684) Protein KIAA0179| Length = 758 Score = 30.0 bits (66), Expect = 7.0 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%) Frame = -2 Query: 497 EEHDSESSRALPSEGGKKKPAQPFLCACRKQREKAA---ERDAGRGPRVDGEEGFPREEA 327 EE SE A+P +K+P + A R+ E A E + GP +G Sbjct: 456 EESGSEHPPAVPMHNKRKRPRKKSPRAHREMLESAVLPPEDMSQSGPSGSHPQGPRGSPT 515 Query: 326 GAVQVRKERDRLGCMEMI*SDLMDCSW 246 G Q+ K + +LG + + S L +W Sbjct: 516 GGAQLLKRKRKLGVVPVNGSGLSTPAW 542
>OVO_DROME (P51521) Protein ovo (Protein shaven baby)| Length = 1351 Score = 30.0 bits (66), Expect = 7.0 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = +1 Query: 304 SLRTCTAPASSRGNPSSPSTRGPRPASRSAAFSLCFLHAHRNG*AGFFLPP 456 SLR + P + PS P R P PA R + AGF LPP Sbjct: 318 SLRLRSTPPPADQRPSPPPPRDPAPAVRCSVIQRAPQSQLPTSRAGFLLPP 368
>PDX1_NEUCR (Q9C1K6) Probable pyridoxin biosynthesis protein pdx-1| Length = 308 Score = 29.6 bits (65), Expect = 9.1 Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 1/65 (1%) Frame = -2 Query: 536 ECIILHQHGLRYIEEHDSESSRALPSEGGKKKPAQPFLCACRKQREKAAERDAGRGP-RV 360 EC IL Q G+ YI+E + + K + PF+C CR E G R Sbjct: 95 ECRILEQLGVDYIDESEVLTPADDTYHVQKDQFKAPFVCGCRNLGEALRRIKEGAAMIRT 154 Query: 359 DGEEG 345 GE G Sbjct: 155 KGEAG 159 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,274,722 Number of Sequences: 219361 Number of extensions: 1983315 Number of successful extensions: 7598 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 7036 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7523 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
