ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbaal24j12 |
|---|---|
| Clone Library Name | barley_pub |
>TRME_STRP8 (Q8P161) tRNA modification GTPase trmE| Length = 458 Score = 34.7 bits (78), Expect = 0.17 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLIN-QLPSKGFKLTNKAD 271 +TDDLV ++G RSK+ +Q+A ++ +V+ + L+N S L NK D Sbjct: 284 ETDDLVEQIGVERSKKALQEADLVLLVLNASEKLTDQDRALLNLSQDSNRIILLNKTD 341
>TRME_STRP3 (Q8K7L5) tRNA modification GTPase trmE| Length = 458 Score = 34.7 bits (78), Expect = 0.17 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLIN-QLPSKGFKLTNKAD 271 +TDDLV ++G RSK+ +Q+A ++ +V+ + L+N S L NK D Sbjct: 284 ETDDLVEQIGVERSKKALQEADLVLLVLNASEKLTDQDRALLNLSQDSNRIILLNKTD 341
>TRME_STRP1 (Q99ZU0) tRNA modification GTPase trmE| Length = 458 Score = 34.7 bits (78), Expect = 0.17 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLIN-QLPSKGFKLTNKAD 271 +TDDLV ++G RSK+ +Q+A ++ +V+ + L+N S L NK D Sbjct: 284 ETDDLVEQIGVERSKKALQEADLVLLVLNASEKLTDQDRALLNLSQDSNRIILLNKTD 341
>TRME_STRMU (Q8DTT8) tRNA modification GTPase trmE| Length = 455 Score = 34.3 bits (77), Expect = 0.22 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVV-PGKSVACQLETLLINQLPSKGFKLTNKAD 271 +TDDLV ++G RSK+ +++A ++ +V+ + + Q TLL S L NK D Sbjct: 281 ETDDLVEKIGVERSKKALEEADLVLLVLNSAEKLTDQDRTLLEISQNSNRLILLNKTD 338
>TRME_CLOAB (Q97CW2) tRNA modification GTPase trmE| Length = 459 Score = 33.5 bits (75), Expect = 0.38 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLINQLPSKGF-KLTNKADGK 265 +T+D++ ++G RSKE M++A ++ ++ + +I+ + K + L NK D K Sbjct: 283 ETEDVIEKMGVERSKEKMENADLIIFMIDSSKKIDAEDLEIIDYIKDKKYIVLLNKVDLK 342 Query: 264 HR 259 +R Sbjct: 343 NR 344
>TRME_STRP6 (Q5XCB7) tRNA modification GTPase trmE| Length = 458 Score = 33.5 bits (75), Expect = 0.38 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLIN-QLPSKGFKLTNKAD 271 +TDDLV ++G RSK+ +Q++ ++ +V+ + L+N S L NK D Sbjct: 284 ETDDLVEQIGVERSKKALQESDLVLLVLNASEKLTDQDRALLNLSQDSNRIILLNKTD 341
>TRME_BACAN (Q81JD9) tRNA modification GTPase trmE| Length = 458 Score = 33.1 bits (74), Expect = 0.50 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLINQLPSKGF-KLTNKAD 271 +T+D+V R+G RSKE M A ++ +VV + L + K F + NK D Sbjct: 280 ETEDVVERIGVERSKEMMSQADLVLVVVNYSETLTNEDEELFRAVQGKDFIVIVNKTD 337
>TRME_BACCR (Q814F6) tRNA modification GTPase trmE| Length = 458 Score = 32.7 bits (73), Expect = 0.65 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLINQLPSKGF-KLTNKAD 271 +T+D+V R+G RSKE M A ++ +VV + L + K F + NK D Sbjct: 280 ETEDVVERIGVERSKEMMSQADLVLVVVNYSEALTNEDEDLFRAVQGKDFIVIVNKTD 337
>TRME_STRAG (Q9RL97) Probable tRNA modification GTPase trmE| Length = 462 Score = 32.3 bits (72), Expect = 0.85 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -3 Query: 438 TDDLVGRLGAHRSKEGMQDATILYIVV-PGKSVACQLETLLINQLPSKGFKLTNKAD 271 TDD+V ++G RSK+ +++A ++ +V+ + + Q +LL S L NK D Sbjct: 289 TDDIVEKIGVERSKKALEEADLVLLVLNSSEPLTLQDRSLLELSKESNRIVLLNKTD 345
>TRME_NEIMB (Q9JXL4) Probable tRNA modification GTPase trmE| Length = 448 Score = 32.3 bits (72), Expect = 0.85 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -3 Query: 468 HEILTPPCLQTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLINQLPS--KG 295 H + T +TDD+V R+G RS++ + +A + ++V + + +++ LP K Sbjct: 267 HIVDTAGLRETDDVVERIGIERSRKAVSEADVALVLVDPREGLNEKTRAILDALPPELKR 326 Query: 294 FKLTNKADGKHRNFGMSVTSGEAMAA 217 ++ +K+D G T E + A Sbjct: 327 IEIHSKSDLHAHAAGGFGTGAETVIA 352
>TRME_STRA5 (Q8CX13) tRNA modification GTPase trmE| Length = 458 Score = 32.3 bits (72), Expect = 0.85 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -3 Query: 438 TDDLVGRLGAHRSKEGMQDATILYIVV-PGKSVACQLETLLINQLPSKGFKLTNKAD 271 TDD+V ++G RSK+ +++A ++ +V+ + + Q +LL S L NK D Sbjct: 285 TDDIVEKIGVERSKKALEEADLVLLVLNSSEPLTLQDRSLLELSKESNRIVLLNKTD 341
>TRME_STRA3 (Q8E5T7) tRNA modification GTPase trmE| Length = 458 Score = 32.3 bits (72), Expect = 0.85 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Frame = -3 Query: 438 TDDLVGRLGAHRSKEGMQDATILYIVV-PGKSVACQLETLLINQLPSKGFKLTNKAD 271 TDD+V ++G RSK+ +++A ++ +V+ + + Q +LL S L NK D Sbjct: 285 TDDIVEKIGVERSKKALEEADLVLLVLNSSEPLTLQDRSLLELSKESNRIVLLNKTD 341
>TRME_NEIMA (Q9JWB7) Probable tRNA modification GTPase trmE| Length = 448 Score = 32.0 bits (71), Expect = 1.1 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -3 Query: 468 HEILTPPCLQTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLINQLP--SKG 295 H + T +TDD+V R+G RS++ + +A + ++V + + +++ LP K Sbjct: 267 HIVDTAGLRETDDVVERIGIERSRKAVSEADVALVLVDPREGLNEKTRAILDALPLELKR 326 Query: 294 FKLTNKADGKHRNFGMSVTSGEAMAA 217 ++ +K+D G T E + A Sbjct: 327 IEIHSKSDLHAHAAGGFGTGAETVIA 352
>TRME_CLOTE (Q899S2) tRNA modification GTPase trmE| Length = 459 Score = 32.0 bits (71), Expect = 1.1 Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLINQLPSKGF-KLTNKAD 271 +T+DLV ++G RSKE + +A ++ +V+ + + +I + K + L NK+D Sbjct: 283 ETEDLVEKIGVERSKEKINEADLVILVLDSSNKLNDEDYEIIEYIKDKKYITLLNKSD 340
>TRPV5_RAT (Q9JIP0) Transient receptor potential cation channel subfamily V| member 5 (TrpV5) (osm-9-like TRP channel 3) (OTRPC3) (Epithelial calcium channel 1) (ECaC1) (Calcium transporter 2) (CaT2) Length = 723 Score = 31.2 bits (69), Expect = 1.9 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%) Frame = -3 Query: 525 GQVFAQSSIHVFFCSFV*GHEILTPPCLQTDDLVGRLGAHRSKEGMQDA---TILYIVV- 358 G F +SS ++ + H + C+ ++++V L H + QD+ T+L+I+V Sbjct: 143 GSAFHRSSHNLIYYG---EHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILVL 199 Query: 357 -PGKSVACQLETLLIN 313 P K+ ACQ+ LL++ Sbjct: 200 QPNKTFACQMYNLLLS 215
>TRPV5_MOUSE (P69744) Transient receptor potential cation channel subfamily V| member 5 (TrpV5) (osm-9-like TRP channel 3) (OTRPC3) (Epithelial calcium channel 1) (ECaC1) (Calcium transport protein 2) (CaT2) Length = 723 Score = 31.2 bits (69), Expect = 1.9 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%) Frame = -3 Query: 525 GQVFAQSSIHVFFCSFV*GHEILTPPCLQTDDLVGRLGAHRSKEGMQDA---TILYIVV- 358 G F +SS ++ + H + C+ ++++V L H + QD+ T+L+I+V Sbjct: 143 GSAFHRSSHNLIYYG---EHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILVL 199 Query: 357 -PGKSVACQLETLLIN 313 P K+ ACQ+ LL++ Sbjct: 200 QPNKTFACQMYNLLLS 215
>SPIN_CBEPV (P23061) Spindolin precursor (Spheroidin) (p50)| Length = 341 Score = 30.8 bits (68), Expect = 2.5 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 8/68 (11%) Frame = +2 Query: 173 ASTS*NWMFSGAVQCAAMASPEVTDI--------PKFRCLPSALLVSLKPFEGS*FMRRV 328 AS + N+M++ + AA+A P+ T+I P + C A S++PF M Sbjct: 76 ASEAANYMYTQDNEYAALAGPDYTNICHIQQRVVPSYLCAAGASDWSIRPFGDKSGMDLP 135 Query: 329 SSWHATLL 352 SW T++ Sbjct: 136 GSWTPTII 143
>TRPV6_HUMAN (Q9H1D0) Transient receptor potential cation channel subfamily V| member 6 (TrpV6) (Epithelial calcium channel 2) (ECaC2) (Calcium transport protein 1) (CaT1) (CaT-like) (CaT-L) Length = 725 Score = 30.4 bits (67), Expect = 3.2 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Frame = -3 Query: 468 HEILTPPCLQTDDLVGRLGAHRSKEGMQDA---TILYIVV--PGKSVACQLETLLIN 313 H + C+ ++++V L H + QD+ T+L+I++ P K+ ACQ+ LL++ Sbjct: 165 HPLSFAACVNSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLS 221
>TRME_AQUAE (O67030) Probable tRNA modification GTPase trmE| Length = 448 Score = 30.4 bits (67), Expect = 3.2 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLINQLPSKG-FKLTNKAD 271 +T DLV R+G RSK+ +++A ++ V+ + + + ++ K + NK D Sbjct: 275 ETKDLVERIGVERSKQKVKEADLILFVIDASQEITEEDLRIYEEIKEKDHIVVANKVD 332
>TRME_STRR6 (Q8DPZ8) tRNA modification GTPase trmE| Length = 457 Score = 30.4 bits (67), Expect = 3.2 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVV-PGKSVACQLETLLINQLPSKGFKLTNKAD 271 +TDD+V ++G RSK+ +++A ++ +V+ + + Q LL + L NK D Sbjct: 283 ETDDIVEQIGVERSKKALKEADLVLLVLNASEPLTAQDRQLLEISQDTNRIILLNKTD 340
>TRME_STRPN (Q97R24) tRNA modification GTPase trmE| Length = 457 Score = 30.4 bits (67), Expect = 3.2 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVV-PGKSVACQLETLLINQLPSKGFKLTNKAD 271 +TDD+V ++G RSK+ +++A ++ +V+ + + Q LL + L NK D Sbjct: 283 ETDDIVEQIGVERSKKALKEADLVLLVLNASEPLTAQDRQLLEISQETNRIILLNKTD 340
>TRPV5_HUMAN (Q9NQA5) Transient receptor potential cation channel subfamily V| member 5 (TrpV5) (osm-9-like TRP channel 3) (OTRPC3) (Epithelial calcium channel 1) (ECaC) (ECaC1) (Calcium transport protein 2) (CaT2) Length = 729 Score = 30.4 bits (67), Expect = 3.2 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Frame = -3 Query: 468 HEILTPPCLQTDDLVGRLGAHRSKEGMQDA---TILYIVV--PGKSVACQLETLLIN 313 H + C+ ++++V L H + QD+ T+L+I++ P K+ ACQ+ LL++ Sbjct: 165 HPLSFAACVNSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLS 221
>TRME_BACHD (Q9RCA7) Probable tRNA modification GTPase trmE| Length = 458 Score = 30.4 bits (67), Expect = 3.2 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVP-GKSVACQLETLLINQLPSKGFKLTNKAD 271 +T+D+V R+G RS+E +++A ++ +V+ G+ ++ + E L + + NK D Sbjct: 280 ETEDIVERIGVERSREVLKEAELILLVLNFGEELSKEDEALFEAISGMEAIVIVNKTD 337
>ZN619_HUMAN (Q8N2I2) Zinc finger protein 619| Length = 560 Score = 30.0 bits (66), Expect = 4.2 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%) Frame = -2 Query: 379 HNTIHRGSWQERCVPTGDSSHKSATLERF*AHQQGRWQASELWYVCN-LWRSHGCA 215 H IH G C G + H+S+ F HQ R+ E Y CN W++ C+ Sbjct: 346 HQRIHTGEKPYECKECGKAFHRSSV---FLQHQ--RFHTGEQLYKCNECWKTFSCS 396
>TRME_ENTFA (Q820T0) tRNA modification GTPase trmE| Length = 465 Score = 29.6 bits (65), Expect = 5.5 Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLINQLPSKGFK---LTNKAD 271 +T+D+V R+G RS++ + D+ ++ +V+ + + L+ +KG K L NK D Sbjct: 287 ETEDIVERIGVERSRKALADSDLILLVLNQSEELTEEDRQLLE--ATKGLKRVILLNKMD 344
>TRPV5_RABIT (Q9XSM3) Transient receptor potential cation channel subfamily V| member 5 (TrpV5) (osm-9-like TRP channel 3) (OTRPC3) (Epithelial calcium channel 1) (ECaC1) Length = 730 Score = 29.6 bits (65), Expect = 5.5 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Frame = -3 Query: 468 HEILTPPCLQTDDLVGRLGAHRSKEGMQDA---TILYIVV--PGKSVACQLETLLIN 313 H + C+ ++++V L H + QD+ T+L+I++ P K+ ACQ+ LL++ Sbjct: 165 HPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLS 221
>TRPV6_RAT (Q9R186) Transient receptor potential cation channel subfamily V| member 6 (TrpV6) (Epithelial calcium channel 2) (ECaC2) (Calcium transport protein 1) (CaT1) Length = 727 Score = 29.6 bits (65), Expect = 5.5 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Frame = -3 Query: 468 HEILTPPCLQTDDLVGRLGAHRSKEGMQDA---TILYIVV--PGKSVACQLETLLIN 313 H + C+ ++++V L H + QD+ T+L+I++ P K+ ACQ+ LL++ Sbjct: 165 HPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLS 221
>TRPV6_MOUSE (Q91WD2) Transient receptor potential cation channel subfamily V| member 6 (TrpV6) (Epithelial calcium channel 2) (ECaC2) (Calcium transport protein 1) (CaT1) Length = 727 Score = 29.6 bits (65), Expect = 5.5 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 5/57 (8%) Frame = -3 Query: 468 HEILTPPCLQTDDLVGRLGAHRSKEGMQDA---TILYIVV--PGKSVACQLETLLIN 313 H + C+ ++++V L H + QD+ T+L+I++ P K+ ACQ+ LL++ Sbjct: 165 HPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLS 221
>RELN_HUMAN (P78509) Reelin precursor (EC 3.4.21.-)| Length = 3460 Score = 29.3 bits (64), Expect = 7.2 Identities = 20/81 (24%), Positives = 36/81 (44%) Frame = -2 Query: 448 LPADG*SRGPSWCS*IQGRYARCHNTIHRGSWQERCVPTGDSSHKSATLERF*AHQQGRW 269 LP+ S G CS Q A +N+++ SW+ + D H S++ +F Q+G Sbjct: 3160 LPSSSNSIG---CSPFQFHEATIYNSVNSSSWKRITIQLPD--HVSSSATQFRWIQKGEE 3214 Query: 268 QASELWYVCNLWRSHGCALNC 206 + W + +++ C C Sbjct: 3215 TEKQSWAIDHVYIGEACPKLC 3235
>TRME_THEMA (Q9WYA4) Probable tRNA modification GTPase trmE| Length = 450 Score = 29.3 bits (64), Expect = 7.2 Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLINQLPSKGFKLT-NKAD 271 +T+DLV RLG R+ + ++ A I+ V+ S + + ++ ++ +K + + NK D Sbjct: 272 ETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRYLVVINKVD 329
>CHD6_HUMAN (Q8TD26) Chromodomain-helicase-DNA-binding protein 6 (EC 3.6.1.-)| (ATP-dependent helicase CHD6) (CHD-6) (Radiation-induced gene B protein) Length = 2715 Score = 29.3 bits (64), Expect = 7.2 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Frame = +2 Query: 122 KDKKQIRKSKVKLHSPLASTS*NWMFS--GAVQCAAMASPEVTDIPKFRCLPSALLVSLK 295 K +KQ+ KV HSP++ S N+ + C+ ++ D+ CLP L + + Sbjct: 7 KKEKQLSNLKVLNHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDVAS-HCLPQKDLYTAE 65 Query: 296 PFEGS*FMRRVSS 334 + F R+++S Sbjct: 66 EEAATLFPRKMTS 78
>TRME_LACLA (Q9CDH8) Probable tRNA modification GTPase trmE| Length = 455 Score = 29.3 bits (64), Expect = 7.2 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -3 Query: 441 QTDDLVGRLGAHRSKEGMQDATILYIVVPGKSVACQLETLLIN-QLPSKGFKLTNKAD 271 +TDDLV +G RSK+ + +A ++ +V+ + + L+ S L NK D Sbjct: 282 ETDDLVEAIGVERSKKALAEADLVLLVLDASNELTDKDLELLELSKNSNRIVLLNKTD 339
>RELN_RAT (P58751) Reelin precursor (EC 3.4.21.-)| Length = 3462 Score = 28.9 bits (63), Expect = 9.3 Identities = 20/81 (24%), Positives = 35/81 (43%) Frame = -2 Query: 448 LPADG*SRGPSWCS*IQGRYARCHNTIHRGSWQERCVPTGDSSHKSATLERF*AHQQGRW 269 LP+ S G CS Q A +N ++ SW+ + D H S++ +F Q+G Sbjct: 3162 LPSSSNSIG---CSPFQFHEATIYNAVNSSSWKRITIQLPD--HVSSSATQFRWIQKGEE 3216 Query: 268 QASELWYVCNLWRSHGCALNC 206 + W + +++ C C Sbjct: 3217 TEKQSWAIDHVYIGEACPRLC 3237
>RELN_MOUSE (Q60841) Reelin precursor (EC 3.4.21.-) (Reeler protein)| Length = 3461 Score = 28.9 bits (63), Expect = 9.3 Identities = 20/81 (24%), Positives = 35/81 (43%) Frame = -2 Query: 448 LPADG*SRGPSWCS*IQGRYARCHNTIHRGSWQERCVPTGDSSHKSATLERF*AHQQGRW 269 LP+ S G CS Q A +N ++ SW+ + D H S++ +F Q+G Sbjct: 3161 LPSSSNSIG---CSPFQFHEATIYNAVNSSSWKRITIQLPD--HVSSSATQFRWIQKGEE 3215 Query: 268 QASELWYVCNLWRSHGCALNC 206 + W + +++ C C Sbjct: 3216 TEKQSWAIDHVYIGEACPKLC 3236 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,357,073 Number of Sequences: 219361 Number of extensions: 1904439 Number of successful extensions: 4463 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4320 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4463 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
