ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal24j11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X98124.1|HVJIP H.vulgare gene encoding jasmonate-induced protein Length = 2897 Score = 428 bits (216), Expect = e-116 Identities = 254/267 (95%) Strand = Plus / Minus Query: 423 accccgttgccaccaatgtaggggacggtccaagagaacaaccaatcgcaggagctgctg 482 ||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||| Sbjct: 2584 accccgttgtcaccaatgtagggggcggtccaggagaacaaccaatcgcaggacctgctg 2525 Query: 483 ctggaggggatcttgctacgatacacaacggcaccagctgaaccagcggcagctccactt 542 ||||||||||||||| ||||||||||||||||||||||||||||| | ||||| |||||| Sbjct: 2524 ctggaggggatcttggtacgatacacaacggcaccagctgaaccaaccgcagcaccactt 2465 Query: 543 gggtggacgtggaggaatgcaccccattgcccattctgaatatctgatgggtagggtgta 602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2464 gggtggacgtggaggaatgcaccccattgcccattctgaatatctgatgggtagggagta 2405 Query: 603 tcatagatatggccgtgccaatcgttgtacttagcaaagttcaaagtggcaccagtggca 662 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 2404 tcatagatatggccgtgccaatcgttgtacttagccaagctcaaagtggcaccagtggca 2345 Query: 663 ttgtagaggangcattttacagctatt 689 ||||||| || |||||||||||||||| Sbjct: 2344 ttgtagatgaggcattttacagctatt 2318
>gb|AC068051.7| Homo sapiens BAC clone RP11-172J1 from 2, complete sequence Length = 122076 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 569 ttgcccattctgaatatctgat 590 |||||||||||||||||||||| Sbjct: 72556 ttgcccattctgaatatctgat 72577
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 626 gttgtacttagcaaagttcaaa 647 |||||||||||||||||||||| Sbjct: 1607160 gttgtacttagcaaagttcaaa 1607181
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 aaaaatgcaccataaagacag 155 ||||||||||||||||||||| Sbjct: 608785 aaaaatgcaccataaagacag 608765
>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0542B04, complete sequence Length = 182823 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 ataaaataaaatacaattaca 77 ||||||||||||||||||||| Sbjct: 157372 ataaaataaaatacaattaca 157392
>gb|AE017308.1| Mycoplasma mobile 163K complete genome Length = 777079 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 catataaaataaaatacaatt 74 ||||||||||||||||||||| Sbjct: 605412 catataaaataaaatacaatt 605432
>gb|AC119951.12| Mus musculus chromosome 9, clone RP24-448C4, complete sequence Length = 215131 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 acatataaaataaaatacaat 73 ||||||||||||||||||||| Sbjct: 176133 acatataaaataaaatacaat 176113
>gb|AC120386.12| Mus musculus chromosome 9, clone RP24-294A16, complete sequence Length = 207310 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 acatataaaataaaatacaat 73 ||||||||||||||||||||| Sbjct: 205231 acatataaaataaaatacaat 205251
>ref|XM_568500.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNM01980) partial mRNA Length = 4980 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 aaaaatgcaccataaagacag 155 ||||||||||||||||||||| Sbjct: 3576 aaaaatgcaccataaagacag 3556
>emb|CR733803.2|CNS0GSZE Tetraodon nigroviridis full-length cDNA Length = 686 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR711764.2|CNS0GC5C Tetraodon nigroviridis full-length cDNA Length = 722 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 266 cgcaggagctgctgctggagg 246
>emb|CR716404.2|CNS0GFQ5 Tetraodon nigroviridis full-length cDNA Length = 718 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR708959.2|CNS0G9ZF Tetraodon nigroviridis full-length cDNA Length = 722 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 266 cgcaggagctgctgctggagg 246
>emb|CR699377.2|CNS0G2L9 Tetraodon nigroviridis full-length cDNA Length = 742 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 258 cgcaggagctgctgctggagg 238
>emb|CR698020.2|CNS0G1JK Tetraodon nigroviridis full-length cDNA Length = 834 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 354 cgcaggagctgctgctggagg 334
>emb|CR696410.2|CNS0G0AU Tetraodon nigroviridis full-length cDNA Length = 744 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR696296.2|CNS0G07O Tetraodon nigroviridis full-length cDNA Length = 700 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 219 cgcaggagctgctgctggagg 199
>emb|CR695497.2|CNS0FZLH Tetraodon nigroviridis full-length cDNA Length = 747 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR692536.2|CNS0FXB8 Tetraodon nigroviridis full-length cDNA Length = 555 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 97 cgcaggagctgctgctggagg 77
>emb|CR689433.2|CNS0FUX1 Tetraodon nigroviridis full-length cDNA Length = 730 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 272 cgcaggagctgctgctggagg 252
>emb|CR680402.2|CNS0FNY6 Tetraodon nigroviridis full-length cDNA Length = 747 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR677964.2|CNS0FM2S Tetraodon nigroviridis full-length cDNA Length = 747 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 262 cgcaggagctgctgctggagg 242
>emb|CR677142.2|CNS0FLG2 Tetraodon nigroviridis full-length cDNA Length = 745 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR676082.2|CNS0FKMW Tetraodon nigroviridis full-length cDNA Length = 679 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 257 cgcaggagctgctgctggagg 237
>emb|CR675727.2|CNS0FKD1 Tetraodon nigroviridis full-length cDNA Length = 753 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR675512.2|CNS0FK72 Tetraodon nigroviridis full-length cDNA Length = 742 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR674041.2|CNS0FJ27 Tetraodon nigroviridis full-length cDNA Length = 724 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 261 cgcaggagctgctgctggagg 241
>emb|CR673710.2|CNS0FIT0 Tetraodon nigroviridis full-length cDNA Length = 756 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 293 cgcaggagctgctgctggagg 273
>emb|CR671918.2|CNS0FHF8 Tetraodon nigroviridis full-length cDNA Length = 745 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR671342.2|CNS0FGZ8 Tetraodon nigroviridis full-length cDNA Length = 735 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR670529.2|CNS0FGCN Tetraodon nigroviridis full-length cDNA Length = 745 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 261 cgcaggagctgctgctggagg 241
>emb|CR669878.2|CNS0FFUK Tetraodon nigroviridis full-length cDNA Length = 812 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 258 cgcaggagctgctgctggagg 238
>emb|CR669596.2|CNS0FFMQ Tetraodon nigroviridis full-length cDNA Length = 751 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 265 cgcaggagctgctgctggagg 245
>emb|CR668449.2|CNS0FEQV Tetraodon nigroviridis full-length cDNA Length = 732 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 250 cgcaggagctgctgctggagg 230
>emb|CR667750.2|CNS0FE7G Tetraodon nigroviridis full-length cDNA Length = 739 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR667585.2|CNS0FE2V Tetraodon nigroviridis full-length cDNA Length = 728 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 248 cgcaggagctgctgctggagg 228
>emb|CR665342.2|CNS0FCCK Tetraodon nigroviridis full-length cDNA Length = 675 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 261 cgcaggagctgctgctggagg 241
>emb|CR664863.2|CNS0FBZ9 Tetraodon nigroviridis full-length cDNA Length = 744 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 263 cgcaggagctgctgctggagg 243
>emb|CR664097.2|CNS0FBDZ Tetraodon nigroviridis full-length cDNA Length = 734 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR661788.2|CNS0F9LU Tetraodon nigroviridis full-length cDNA Length = 751 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 266 cgcaggagctgctgctggagg 246
>emb|CR660976.2|CNS0F8ZA Tetraodon nigroviridis full-length cDNA Length = 654 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 255 cgcaggagctgctgctggagg 235
>emb|CR660605.2|CNS0F8OZ Tetraodon nigroviridis full-length cDNA Length = 758 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 272 cgcaggagctgctgctggagg 252
>emb|CR659570.2|CNS0F7W8 Tetraodon nigroviridis full-length cDNA Length = 711 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 233 cgcaggagctgctgctggagg 213
>emb|CR659084.2|CNS0F7IQ Tetraodon nigroviridis full-length cDNA Length = 747 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR651699.2|CNS0F1TL Tetraodon nigroviridis full-length cDNA Length = 756 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 272 cgcaggagctgctgctggagg 252
>emb|CR651536.2|CNS0F1P2 Tetraodon nigroviridis full-length cDNA Length = 743 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR651336.2|CNS0F1JI Tetraodon nigroviridis full-length cDNA Length = 757 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR650557.2|CNS0F0XV Tetraodon nigroviridis full-length cDNA Length = 722 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 266 cgcaggagctgctgctggagg 246
>emb|CR649305.2|CNS0EZZ3 Tetraodon nigroviridis full-length cDNA Length = 740 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR648318.2|CNS0EZ7O Tetraodon nigroviridis full-length cDNA Length = 743 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR646958.2|CNS0EY5W Tetraodon nigroviridis full-length cDNA Length = 743 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR645869.2|CNS0EXBN Tetraodon nigroviridis full-length cDNA Length = 736 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR644577.2|CNS0EWBR Tetraodon nigroviridis full-length cDNA Length = 742 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR643036.2|CNS0EV4Y Tetraodon nigroviridis full-length cDNA Length = 749 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 266 cgcaggagctgctgctggagg 246
>emb|CR641795.2|CNS0EU6H Tetraodon nigroviridis full-length cDNA Length = 688 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR638894.2|CNS0ERXW Tetraodon nigroviridis full-length cDNA Length = 734 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>emb|CR638268.2|CNS0ERGI Tetraodon nigroviridis full-length cDNA Length = 749 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 266 cgcaggagctgctgctggagg 246
>emb|CR637928.2|CNS0ER72 Tetraodon nigroviridis full-length cDNA Length = 686 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR636839.2|CNS0EQCT Tetraodon nigroviridis full-length cDNA Length = 736 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR635741.2|CNS0EPIB Tetraodon nigroviridis full-length cDNA Length = 757 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 274 cgcaggagctgctgctggagg 254
>emb|CR634961.2|CNS0EOWN Tetraodon nigroviridis full-length cDNA Length = 737 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR634400.2|CNS0EOH2 Tetraodon nigroviridis full-length cDNA Length = 742 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 264 cgcaggagctgctgctggagg 244
>emb|CR634390.2|CNS0EOGS Tetraodon nigroviridis full-length cDNA Length = 740 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggagg 489 ||||||||||||||||||||| Sbjct: 256 cgcaggagctgctgctggagg 236
>gb|AC134265.6| Rattus norvegicus 13 BAC CH230-151K3 (Children's Hospital Oakland Research Institute) complete sequence Length = 209981 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 atataaaataaaatacaatta 75 ||||||||||||||||||||| Sbjct: 119223 atataaaataaaatacaatta 119203
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 53 acatataaaataaaatacaat 73 ||||||||||||||||||||| Sbjct: 1008832 acatataaaataaaatacaat 1008812
>gb|AC011059.8| Homo sapiens chromosome 18, clone RP11-11F23, complete sequence Length = 143799 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 55 atataaaataaaatacaatta 75 ||||||||||||||||||||| Sbjct: 37063 atataaaataaaatacaatta 37043
>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 ataaaataaaatacaattaca 77 ||||||||||||||||||||| Sbjct: 123343 ataaaataaaatacaattaca 123323
>gb|AC027369.8| Homo sapiens chromosome , clone RP11-56P9, complete sequence Length = 190979 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 53 acatataaaataaaatacaat 73 ||||||||||||||||||||| Sbjct: 80842 acatataaaataaaatacaat 80862
>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 ataaaataaaatacaattaca 77 ||||||||||||||||||||| Sbjct: 123343 ataaaataaaatacaattaca 123323
>gb|AC131183.4| Mus musculus BAC clone RP23-225A14 from chromosome 12, complete sequence Length = 141293 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 134 taaaaatgcaccataaagacagtaa 158 |||||||||| |||||||||||||| Sbjct: 64471 taaaaatgcaacataaagacagtaa 64447
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 ataaaataaaatacaattaca 77 ||||||||||||||||||||| Sbjct: 20312859 ataaaataaaatacaattaca 20312879
>gb|AC147245.3| Mus musculus BAC clone RP23-462E12 from 12, complete sequence Length = 179735 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 134 taaaaatgcaccataaagacagtaa 158 |||||||||| |||||||||||||| Sbjct: 28978 taaaaatgcaacataaagacagtaa 29002
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 ataaaataaaatacaattaca 77 ||||||||||||||||||||| Sbjct: 20623098 ataaaataaaatacaattaca 20623118
>gb|AE014827.1| Plasmodium falciparum 3D7 chromosome 14 section 12 of 13 of the complete sequence Length = 254436 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 atataaaataaaatacaatt 74 |||||||||||||||||||| Sbjct: 97492 atataaaataaaatacaatt 97473
>ref|NM_178397.2| Mus musculus UBX domain containing 8 (Ubxd8), mRNA Length = 4304 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 caggagctgctgctggaggg 490 |||||||||||||||||||| Sbjct: 1702 caggagctgctgctggaggg 1683
>gb|AC006027.5| Homo sapiens BAC clone GS1-114I9 from 7, complete sequence Length = 68769 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 64133 aggagctgctgctggaggagatct 64110
>emb|BX927092.21| Zebrafish DNA sequence from clone CH211-69I15 in linkage group 1, complete sequence Length = 108803 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ataaaataaaatacaattac 76 |||||||||||||||||||| Sbjct: 76421 ataaaataaaatacaattac 76402
>gb|AY187250.1| Homo sapiens CARD4 isoform 2 (CARD4) mRNA, partial sequence; alternatively spliced Length = 493 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 36 aggagctgctgctggaggagatct 59
>gb|AY187249.1| Homo sapiens CARD4 isoform 1 (CARD4) mRNA, partial sequence; alternatively spliced Length = 629 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 36 aggagctgctgctggaggagatct 59
>emb|Z73912.1|CEZK524 Caenorhabditis elegans Cosmid ZK524, complete sequence Length = 30190 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 acttgaatttttcagcttca 357 |||||||||||||||||||| Sbjct: 21841 acttgaatttttcagcttca 21860
>gb|BC040339.1| Homo sapiens caspase recruitment domain family, member 4, mRNA (cDNA clone MGC:17074 IMAGE:4338930), complete cds Length = 4422 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 890 aggagctgctgctggaggagatct 913
>gb|AC130364.5| Homo sapiens chromosome 11, clone RP11-707M1, complete sequence Length = 173032 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 atataaaataaaatacaatt 74 |||||||||||||||||||| Sbjct: 143037 atataaaataaaatacaatt 143056
>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12 Length = 349726 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 cgcaggagctgctgctggag 488 |||||||||||||||||||| Sbjct: 109856 cgcaggagctgctgctggag 109837
>emb|AL161492.2|ATCHRIV4 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 4 Length = 198697 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tataaaataaaatacaatta 75 |||||||||||||||||||| Sbjct: 140355 tataaaataaaatacaatta 140336
>ref|NM_006092.1| Homo sapiens caspase recruitment domain family, member 4 (CARD4), mRNA Length = 4390 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 876 aggagctgctgctggaggagatct 899
>dbj|AK023969.1| Homo sapiens cDNA FLJ13907 fis, clone Y79AA1000033, highly similar to Homo sapiens CARD4 mRNA Length = 4610 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 936 aggagctgctgctggaggagatct 959
>gb|AC107937.2| Homo sapiens chromosome 11, clone CTD1-2019H2, complete sequence Length = 79253 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 atataaaataaaatacaatt 74 |||||||||||||||||||| Sbjct: 76268 atataaaataaaatacaatt 76249
>gb|AC096531.2| Homo sapiens chromosome 1 clone RP11-472F19, complete sequence Length = 172281 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 acatataaaataaaatacaa 72 |||||||||||||||||||| Sbjct: 72880 acatataaaataaaatacaa 72899
>dbj|AK151617.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830032D22 product:ETEA homolog [Homo sapiens], full insert sequence Length = 1750 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 caggagctgctgctggaggg 490 |||||||||||||||||||| Sbjct: 1645 caggagctgctgctggaggg 1626
>dbj|AK148529.1| Mus musculus adult pancreas islet cells cDNA, RIKEN full-length enriched library, clone:C820018J06 product:ETEA homolog [Homo sapiens], full insert sequence Length = 4286 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 caggagctgctgctggaggg 490 |||||||||||||||||||| Sbjct: 1702 caggagctgctgctggaggg 1683
>dbj|AK170111.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630018A15 product:ETEA homolog [Homo sapiens], full insert sequence Length = 1939 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 caggagctgctgctggaggg 490 |||||||||||||||||||| Sbjct: 1724 caggagctgctgctggaggg 1705
>gb|AC092717.2| Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR05N10, complete sequence Length = 169600 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aacgacatataaaataaaat 68 |||||||||||||||||||| Sbjct: 77084 aacgacatataaaataaaat 77065
>ref|NM_001026704.2| Caenorhabditis elegans Leucyl tRNA Synthetase family member (lrs-2) (lrs-2) mRNA, complete cds Length = 2583 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 acttgaatttttcagcttca 357 |||||||||||||||||||| Sbjct: 2406 acttgaatttttcagcttca 2387
>ref|NM_001026705.2| Caenorhabditis elegans Leucyl tRNA Synthetase family member (lrs-2) (lrs-2) mRNA, complete cds Length = 2733 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 acttgaatttttcagcttca 357 |||||||||||||||||||| Sbjct: 2406 acttgaatttttcagcttca 2387
>gb|AC007173.6|AC007173 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR01A03, complete sequence Length = 155254 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aacgacatataaaataaaat 68 |||||||||||||||||||| Sbjct: 50170 aacgacatataaaataaaat 50151
>gb|AC016717.8| Homo sapiens BAC clone RP11-314B1 from 2, complete sequence Length = 210558 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 645 aaagtggcaccagtggcattgtag 668 ||||||| |||||||||||||||| Sbjct: 18114 aaagtgggaccagtggcattgtag 18137
>gb|AC096753.5| Homo sapiens BAC clone RP11-458O14 from 2, complete sequence Length = 102620 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 gacatataaaataaaataca 71 |||||||||||||||||||| Sbjct: 60696 gacatataaaataaaataca 60677
>gb|AC010181.17| Homo sapiens 3 BAC RP11-68L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 29651 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 470 gcaggagctgctgctggaggggat 493 |||||||||| ||||||||||||| Sbjct: 27059 gcaggagctgatgctggaggggat 27082
>gb|BC046817.1| Mus musculus UBX domain containing 8, mRNA (cDNA clone MGC:61375 IMAGE:5702561), complete cds Length = 4304 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 caggagctgctgctggaggg 490 |||||||||||||||||||| Sbjct: 1702 caggagctgctgctggaggg 1683
>gb|BC048767.1| Mus musculus UBX domain containing 8, mRNA (cDNA clone IMAGE:6330214) Length = 1684 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 caggagctgctgctggaggg 490 |||||||||||||||||||| Sbjct: 1548 caggagctgctgctggaggg 1529
>gb|AC092583.2| Homo sapiens BAC clone RP11-19B22 from 2, complete sequence Length = 155359 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 aaaataaaatacaattacac 78 |||||||||||||||||||| Sbjct: 13622 aaaataaaatacaattacac 13641
>gb|AC091530.4| Papio anubis clone RP41-444A14, complete sequence Length = 162413 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 70588 aggagctgctgctggaggagatct 70565
>emb|BX072573.5| Zebrafish DNA sequence from clone DKEY-16I6, complete sequence Length = 207797 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tataaaataaaatacaatta 75 |||||||||||||||||||| Sbjct: 10193 tataaaataaaatacaatta 10174
>dbj|AP006587.1| Homo sapiens genomic DNA, chromosome 11 clone:RP11-163O19, complete sequence Length = 172438 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 atataaaataaaatacaatt 74 |||||||||||||||||||| Sbjct: 25184 atataaaataaaatacaatt 25203
>emb|BX890602.8| Zebrafish DNA sequence from clone DKEYP-109H9 in linkage group 18, complete sequence Length = 191296 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 taaaataaaatacaattaca 77 |||||||||||||||||||| Sbjct: 42254 taaaataaaatacaattaca 42235
>gb|AF149774.1|HSNOD1G2 Homo sapiens NOD1 protein (NOD1) gene, exons 4 through 14 and complete cds Length = 34223 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 4441 aggagctgctgctggaggagatct 4464
>gb|AF113925.1|AF113925 Homo sapiens Nod1 mRNA, complete cds Length = 4390 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 876 aggagctgctgctggaggagatct 899
>gb|AF126484.1|AF126484 Homo sapiens CARD4 mRNA, complete cds Length = 3589 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 472 aggagctgctgctggaggggatct 495 |||||||||||||||||| ||||| Sbjct: 903 aggagctgctgctggaggagatct 926
>gb|AE003658.3| Drosophila melanogaster chromosome 2L, section 67 of 83 of the complete sequence Length = 262745 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 aacgacatataaaataaaat 68 |||||||||||||||||||| Sbjct: 150819 aacgacatataaaataaaat 150800
>dbj|AB096633.1| Caenorhabditis elegans lrs-2 mRNA for leucyl-tRNA synthetase (mitochondrial), complete cds Length = 2649 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 acttgaatttttcagcttca 357 |||||||||||||||||||| Sbjct: 2310 acttgaatttttcagcttca 2291
>dbj|AK122394.1| Mus musculus mRNA for mKIAA0887 protein Length = 4221 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 caggagctgctgctggaggg 490 |||||||||||||||||||| Sbjct: 1636 caggagctgctgctggaggg 1617
>gb|AF104919.1|T15B16 Arabidopsis thaliana BAC T15B16 Length = 90596 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tataaaataaaatacaatta 75 |||||||||||||||||||| Sbjct: 53618 tataaaataaaatacaatta 53637
>gb|AC162526.3| Mus musculus BAC clone RP23-50I19 from chromosome 13, complete sequence Length = 219418 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 caggagctgctgctggaggg 490 |||||||||||||||||||| Sbjct: 84199 caggagctgctgctggaggg 84180
>emb|AL929197.6| Mouse DNA sequence from clone RP23-47C18 on chromosome 2, complete sequence Length = 46845 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 acatataaaataaaatacaa 72 |||||||||||||||||||| Sbjct: 13484 acatataaaataaaatacaa 13503
>emb|AL844900.3| Mouse DNA sequence from clone RP23-301L16 on chromosome X, complete sequence Length = 183256 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 atataaaataaaatacaatt 74 |||||||||||||||||||| Sbjct: 123391 atataaaataaaatacaatt 123372 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,680,028 Number of Sequences: 3902068 Number of extensions: 6680028 Number of successful extensions: 148418 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 148119 Number of HSP's gapped (non-prelim): 299 length of query: 689 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 666 effective length of database: 17,143,297,704 effective search space: 11417436270864 effective search space used: 11417436270864 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
