ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal24j10 |
|---|---|
| Clone Library Name | barley_pub |
>APOD_MOUSE (P51910) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 59.7 bits (143), Expect = 8e-09 Identities = 45/163 (27%), Positives = 63/163 (38%), Gaps = 6/163 (3%) Frame = -1 Query: 699 GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQ 520 GRW+E+ + F E +C Q Y+ E +E SPDG + ++G+ Sbjct: 44 GRWYEIEKIPASF-----EKGNCIQANYSLMENGN---IEVLNKELSPDGTMNQVKGEA- 94 Query: 519 CLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAK---- 352 K+ +S L P +P PY +LATDY+NYA+V Sbjct: 95 ---------------KQSNVSEPAKLEVQFFPLMPPAPYWILATDYENYALVYSCTTFFW 139 Query: 351 --DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQ 229 F+ I R P PE I K G D K+ T Q Sbjct: 140 LFHVDFVWILGRNPYLPPETITYLKDILTSNGIDIEKMTTTDQ 182
>APOD_HUMAN (P05090) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 52.8 bits (125), Expect = 1e-06 Identities = 42/163 (25%), Positives = 63/163 (38%), Gaps = 6/163 (3%) Frame = -1 Query: 699 GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQ 520 GRW+E+ + F E+ C Q Y+ E K++ DG + I G+ Sbjct: 44 GRWYEIEKIPTTF-----ENGRCIQANYSLMENG---KIKVLNQELRADGTVNQIEGEAT 95 Query: 519 CLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAK---- 352 ++ + A E F+P PY +LATDY+NYA+V Sbjct: 96 PVNLTEPAKLEVKFSW----------------FMPSAPYWILATDYENYALVYSCTCIIQ 139 Query: 351 --DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQ 229 F I +R PN PE ++ K+ D K+ T Q Sbjct: 140 LFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVTDQ 182
>APOD_RAT (P23593) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 45.1 bits (105), Expect = 2e-04 Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 6/163 (3%) Frame = -1 Query: 699 GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQ 520 GRW+E+ + F E +C Q Y+ E G IKV + PDG + + G+ Sbjct: 44 GRWYEIEKIPVSF-----EKGNCIQANYSLMEN-GNIKVLNKELR--PDGTLNQVEGEA- 94 Query: 519 CLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAK---- 352 K+ +S L +P PY +LATDY++YA+V Sbjct: 95 ---------------KQSNMSEPAKLEVQFFSLMPPAPYWILATDYESYALVYSCTTFFW 139 Query: 351 --DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQ 229 ++ I R P PE I K D +KI Q Sbjct: 140 FFHVDYVWILGRNPYLPPETITYLKYILTSNDIDIAKITTKDQ 182
>APOD_CAVPO (P51909) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 44.3 bits (103), Expect = 4e-04 Identities = 32/112 (28%), Positives = 49/112 (43%) Frame = -1 Query: 699 GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQ 520 GRW+E+ + F E +C Q Y+ E +V+ PDG + I G+ Sbjct: 44 GRWYEIEKIPVSF-----EKGNCIQANYSLKENG---RVKVLNQELRPDGTVNQIEGE-- 93 Query: 519 CLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 364 + +++ + + K F +P PY VLATDYDNYA+V Sbjct: 94 --------ATHSNITEPAKLGVKFF------QLMPSAPYWVLATDYDNYALV 131
>APOD_RABIT (P37153) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 43.9 bits (102), Expect = 5e-04 Identities = 36/112 (32%), Positives = 52/112 (46%) Frame = -1 Query: 699 GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQ 520 GRW+E+ + F E +C Q Y+ E G IKV + PDG + I G+ Sbjct: 45 GRWYEIEKIPVSF-----EKGNCIQANYSLMEN-GNIKVLNQELR--PDGTVNQIEGQ-- 94 Query: 519 CLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVV 364 + +++L + + K F PT P Y VLATDY+NYA+V Sbjct: 95 --------ATQSNLTEPAKLGVKFFQLMPTAP------YWVLATDYENYALV 132
>APOD_MACFA (Q8SPI0) Apolipoprotein D precursor (Apo-D) (ApoD)| Length = 189 Score = 43.1 bits (100), Expect = 8e-04 Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 6/164 (3%) Frame = -1 Query: 699 GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQ 520 GRW+E+ + F E C Q Y+ E K++ DG + I G+ Sbjct: 44 GRWYEIEKIPTTF-----EKGRCIQANYSLKENG---KIKVLNQELRADGTVNQIEGEAS 95 Query: 519 CLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAKD--- 349 ++ + A E K F F+P PY VLATDY+NYA+V Sbjct: 96 PVNITEPAKLEV----------KFFW------FMPSAPYWVLATDYENYALVYSCVSIIN 139 Query: 348 ---TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQD 226 + I +R + E ++ K+ D K+ T Q+ Sbjct: 140 LFRVDYAWILARNRHLPSETVDFLKNILTSNNIDVKKMTVTDQE 183
>PTGDS_MACFU (Q9TUI1) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 190 Score = 38.5 bits (88), Expect = 0.020 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%) Frame = -1 Query: 399 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 V+ TDYD+YA++ G+K D +YSRT P E EK+ ++ G+ I Sbjct: 120 VVETDYDHYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFSAFCKAQGFTEDSIVF 179 Query: 237 TPQDCEVSSDQ 205 PQ + ++Q Sbjct: 180 LPQTDKCMTEQ 190
>PTGDS_HORSE (O97921) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 194 Score = 38.1 bits (87), Expect = 0.026 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 9/66 (13%) Frame = -1 Query: 399 VLATDYDNYAVVS---------GAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 247 V+ TDY+ YA++ G +D +YSR +P PE EK+ ++A G+ Sbjct: 120 VVETDYEEYALLYTHAESTKGLGGQDFRMATLYSRVQSPRPEVKEKFSTFAKAQGFTEDA 179 Query: 246 IKDTPQ 229 I PQ Sbjct: 180 IVFLPQ 185
>PTGDS_PONPY (Q8WNM0) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 190 Score = 37.4 bits (85), Expect = 0.044 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Frame = -1 Query: 399 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 V+ TDYD YA++ G+K D +YSRT P E EK+ ++ G+ I Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179 Query: 237 TPQDCEVSSDQ 205 PQ + ++Q Sbjct: 180 LPQTDKCMTEQ 190
>PTGDS_HUMAN (P41222) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) (Beta-trace protein) (Cerebrin-28) Length = 190 Score = 37.4 bits (85), Expect = 0.044 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Frame = -1 Query: 399 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 V+ TDYD YA++ G+K D +YSRT P E EK+ ++ G+ I Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179 Query: 237 TPQDCEVSSDQ 205 PQ + ++Q Sbjct: 180 LPQTDKCMTEQ 190
>PTGDS_GORGO (Q8WNM1) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 190 Score = 37.0 bits (84), Expect = 0.058 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%) Frame = -1 Query: 399 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 V+ TDYD YA++ G+K D +YSRT P E EK+ ++ G+ I Sbjct: 120 VVETDYDQYALLYSQGSKGPGEDFRMATLYSRTQTPRAELKEKFTAFCKAQGFTEDTIVF 179 Query: 237 TPQDCEVSSDQ 205 PQ + ++Q Sbjct: 180 LPQTDKCLTEQ 190
>PTGDS_FELCA (Q29487) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 191 Score = 36.6 bits (83), Expect = 0.075 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%) Frame = -1 Query: 399 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 V+ATDY+ YA++ S +D +YSRT P E EK+ ++A G+ I Sbjct: 120 VVATDYEEYALLYTAGTKSPGQDFHMATLYSRTQTPRAEVKEKFSTFAKTRGFTEDAIVF 179 Query: 237 TPQ 229 P+ Sbjct: 180 LPK 182
>PTGDS_URSAR (Q29562) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 191 Score = 36.2 bits (82), Expect = 0.098 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Frame = -1 Query: 399 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 V TDYD YA++ +G K D +YSRT P E EK+ ++A G+ I Sbjct: 120 VAMTDYDEYALLYTTGTKGLGQDFHMATLYSRTQTPRAEIKEKFTTFAKTQGFTEDAIVF 179 Query: 237 TPQ 229 PQ Sbjct: 180 LPQ 182
>PTGDS_CANFA (Q9XS65) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 191 Score = 36.2 bits (82), Expect = 0.098 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 6/63 (9%) Frame = -1 Query: 399 VLATDYDNYAVV--SGAK----DTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 V+AT+Y+ YA++ +G+K D +YSRT P E EK+ ++A G+ I Sbjct: 120 VVATNYEEYALLYTAGSKGLGQDFHMATLYSRTQTPKAEIKEKFSTFAKTQGFTEDAIVF 179 Query: 237 TPQ 229 PQ Sbjct: 180 LPQ 182
>BLG4_BLAGE (P54962) Allergen Bla g 4 precursor (Bla g IV) (Fragment)| Length = 182 Score = 33.9 bits (76), Expect = 0.49 Identities = 13/17 (76%), Positives = 15/17 (88%) Frame = -1 Query: 408 PYDVLATDYDNYAVVSG 358 PY VLATDY+NYA+V G Sbjct: 101 PYSVLATDYENYAIVEG 117
>PTGDS_SHEEP (Q9XSM0) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 191 Score = 33.5 bits (75), Expect = 0.64 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Frame = -1 Query: 399 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 V TDY+ YA++ D+ +YSRT P E EK+ ++A G+ I Sbjct: 120 VAETDYETYALLYTESVRGPGPDSLMATLYSRTQTPRAEVKEKFTTFARSLGFTEEGIVF 179 Query: 237 TPQ 229 P+ Sbjct: 180 LPK 182
>EXFAB_COTJA (Q9I9P7) Extracellular fatty acid-binding protein precursor| (Ex-FABP) (Lipocalin Q83) Length = 178 Score = 33.1 bits (74), Expect = 0.83 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%) Frame = -1 Query: 414 KLPYDVLATDYDNYAV-----VSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPS 250 K +VL TDY +YAV V + +++YSR+P P ++ A Y Sbjct: 103 KKKVEVLDTDYKSYAVIYATRVKDGRTLHMMRLYSRSPEVSPAATAIFRKLAGERNYTDE 162 Query: 249 KIKDTPQDCEVSSDQL 202 + P+ E + D++ Sbjct: 163 MVAMLPRQEECTVDEV 178
>RUSC2_MOUSE (Q80U22) RUN and SH3 domain-containing protein 2| Length = 1514 Score = 32.7 bits (73), Expect = 1.1 Identities = 19/44 (43%), Positives = 22/44 (50%) Frame = -3 Query: 292 EVQVICCRLRLRPEQDQGHAAGLRGVLGPASADDVYARDGRGPD 161 EVQ +C L P Q H + VLGPA D + R RGPD Sbjct: 1449 EVQALCHHLATGPGQLSFHKGDILRVLGPARGD--WLRCSRGPD 1490
>CRA2_HOMGA (P80007) Crustacyanin-A2 subunit| Length = 174 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%) Frame = -1 Query: 426 PFIPKLPYDVLATDYDNYAVVSGAKDT-----SFIQIYSRTPNPGPEFIEK 289 P + PY+V+ TDY+ Y+ V T F ++SRTP +EK Sbjct: 96 PSVFAAPYEVIETDYETYSCVYSCITTDNYKSEFAFVFSRTPQTSGPAVEK 146
>PTGDS_PIG (Q29095) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 189 Score = 32.3 bits (72), Expect = 1.4 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Frame = -1 Query: 411 LPYDVLATDYDNYAVVSGAKDTS------FIQIYSRTPNPGPEFIEKYKSYAAGFGYDPS 250 L V+ TDY NYA++ S +YSR+ PG EK+ ++A G+ Sbjct: 114 LEVSVVETDYKNYALLHTESGPSPGPAFRMATLYSRSQAPGAAVREKFTAFAKARGFTED 173 Query: 249 KIKDTPQD 226 I P++ Sbjct: 174 GIVFLPRN 181
>NHR18_CAEEL (O16360) Nuclear hormone receptor family member nhr-18| Length = 394 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 1/88 (1%) Frame = -1 Query: 525 VQCLSQEDMASAETDLEKEEMIS-SKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGAKD 349 + C + + +T ++ +++ ++ L+ PT +P + LAT DN V K+ Sbjct: 107 ILCCEPDRASVLKTTIDVTRLVNIARDMLQKPTNHVLPSNSLEQLATTLDNMRCVESNKE 166 Query: 348 TSFIQIYSRTPNPGPEFIEKYKSYAAGF 265 FI+ Y + +E KS+ GF Sbjct: 167 VKFIEKYGK--------VETLKSWEQGF 186
>LAZA_SCHAM (P49291) Lazarillo protein precursor| Length = 214 Score = 32.0 bits (71), Expect = 1.9 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 7/85 (8%) Frame = -1 Query: 453 KCFLRFPTLPFIPKLPYDVLATDYDNYAVV-------SGAKDTSFIQIYSRTPNPGPEFI 295 K + FP P + Y +L+TDYDNY++V A T I R+ N + Sbjct: 107 KLSVHFPNSPSVGN--YWILSTDYDNYSIVWSCVKRPDSAASTEISWILLRSRNSSNMTL 164 Query: 294 EKYKSYAAGFGYDPSKIKDTPQDCE 220 E+ + D +K T Q + Sbjct: 165 ERVEDELKNLQLDLNKYTKTEQSAK 189
>PTGDS_BOVIN (O02853) Prostaglandin-H2 D-isomerase precursor (EC 5.3.99.2)| (Lipocalin-type prostaglandin-D synthase) (Glutathione-independent PGD synthetase) (Prostaglandin-D2 synthase) (PGD2 synthase) (PGDS2) (PGDS) Length = 191 Score = 32.0 bits (71), Expect = 1.9 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Frame = -1 Query: 399 VLATDYDNYAVV------SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 V TDY+ YA++ +D +YSR+ NP E E + ++A G+ I Sbjct: 120 VAETDYETYALLYTEGVRGPGQDFRMATLYSRSQNPRAEVKEHFTTFAKSLGFTEEGIVF 179 Query: 237 TPQ 229 P+ Sbjct: 180 LPK 182
>ISW1_YEAST (P38144) Chromatin remodelling complex ATPase chain ISW1 (EC 3.6.1.-)| Length = 1129 Score = 31.6 bits (70), Expect = 2.4 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 7/92 (7%) Frame = -1 Query: 387 DYDNYAVVSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKDTPQDCEVSSD 208 ++ + VSG + IQ +R PG + +E+ ++YA F + +I+D + ++ + Sbjct: 891 EFRKFITVSGKYGRNSIQAIARELAPG-KTLEEVRAYAKAFWSNIERIEDYEKYLKIIEN 949 Query: 207 QLAQMMSMPGMDEAL-------TNQFPDLKLK 133 + ++ + EAL N F DLKLK Sbjct: 950 EEEKIKRVKMQQEALRRKLSEYKNPFFDLKLK 981
>CRC1_HOMGA (P80029) Crustacyanin-C1 subunit| Length = 181 Score = 31.2 bits (69), Expect = 3.2 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Frame = -1 Query: 408 PYDVLATDYDNYAVVSGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 247 P +L TDY NYA + D + F I+SR+ N ++++K ++ D ++ Sbjct: 104 PLVILETDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTR 163 Query: 246 IKDTPQ 229 T Q Sbjct: 164 FVKTVQ 169
>CRA1_HOMGA (P58989) Crustacyanin-A1 subunit| Length = 181 Score = 31.2 bits (69), Expect = 3.2 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Frame = -1 Query: 408 PYDVLATDYDNYAVVSGAKD------TSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSK 247 P +L TDY NYA + D + F I+SR+ N ++++K ++ D ++ Sbjct: 104 PLVILETDYSNYACLYSCIDYNFGYHSDFSFIFSRSANLADQYVKKCEAAFKNINVDTTR 163 Query: 246 IKDTPQ 229 T Q Sbjct: 164 FVKTVQ 169
>VL2_HPV55 (Q80939) Minor capsid protein L2| Length = 460 Score = 31.2 bits (69), Expect = 3.2 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Frame = -1 Query: 408 PYDVLATDYDNYAVVSGAKDTSFIQIYSRTPNPGPEFIEK--YKSYAAGFGYDPSKIKDT 235 P A + + + +V+ A DTS IY+ P P+F E+ S++ + S + T Sbjct: 326 PISAAAEEIELHPLVATAHDTSLFDIYA---EPDPDFTEEPVPLSFSTSTPFQRSSVSAT 382 Query: 234 PQDCEVSSDQLAQMMSMPGMDEALTNQFPDLKLKSSVAFDPFTSVTQTL 88 P +S+PG + PD+ ++ P++ VT L Sbjct: 383 PW------GNTTVPLSLPG--DMFVQPGPDIIFPTASTTTPYSPVTPAL 423
>PURP_CHICK (P08938) Purpurin precursor| Length = 196 Score = 31.2 bits (69), Expect = 3.2 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 8/47 (17%) Frame = -1 Query: 405 YDVLATDYDNYAVV--------SGAKDTSFIQIYSRTPNPGPEFIEK 289 Y V+ TDYDNYA+ G+ D + I+SR P P I++ Sbjct: 126 YWVIDTDYDNYAITYACRSLKEDGSCDDGYSLIFSRNPRGLPPAIQR 172
>MFRP_MOUSE (Q8K480) Membrane frizzled-related protein (Membrane-type| frizzled-related protein) Length = 584 Score = 31.2 bits (69), Expect = 3.2 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 16/86 (18%) Frame = +2 Query: 50 VCVYLKYTSASFFRVWVTLVNGSNATDDLS----------------FRSGNWFVRASSIP 181 +C+ L Y + +F +WV L + TD L F G R +S+ Sbjct: 478 MCLGLSYNTTAFPNIWVGLATQTEVTDILRGYKSLTSLPCYQTFQRFLCGLLVPRCTSLG 537 Query: 182 GIDIICASWSEDTSQSCGVSLILLGS 259 I C S + Q C SL LLG+ Sbjct: 538 TILPPCRSVCQAAEQQCQSSLALLGT 563
>COMD5_RAT (Q9ERR2) COMM domain-containing protein 5 (Hypertension-related| calcium-regulated gene protein) (HCaRG) Length = 224 Score = 30.8 bits (68), Expect = 4.1 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%) Frame = +1 Query: 424 RECRESQKALAADHLLL---LEISLGTSHVLLRQALHLPP 534 ++CRE+ + L A L L + L +H LL+QAL LPP Sbjct: 62 KDCREAVEQLGASANLSEERLAVLLAGTHTLLQQALRLPP 101
>NGAL_MOUSE (P11672) Neutrophil gelatinase-associated lipocalin precursor| (NGAL) (p25) (SV-40-induced 24P3 protein) (Lipocalin-2) Length = 200 Score = 30.8 bits (68), Expect = 4.1 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 6/73 (8%) Frame = -1 Query: 426 PFIPKLPYDVLATDYDNYAVV-----SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFG 262 P + V TDY+ +A+V S K I +Y RT PE E++ +A G Sbjct: 123 PQVQSYNVQVATTDYNQFAMVFFRKTSENKQYFKITLYGRTKELSPELKERFTRFAKSLG 182 Query: 261 Y-DPSKIKDTPQD 226 D + I P D Sbjct: 183 LKDDNIIFSVPTD 195
>YFCB_SALTY (P0A293) Hypothetical adenine-specific methylase yfcB (EC 2.1.1.72)| Length = 310 Score = 30.8 bits (68), Expect = 4.1 Identities = 19/81 (23%), Positives = 37/81 (45%) Frame = -1 Query: 627 QGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEEMISSKC 448 Q Y D G+ + C + PD + + +S + +A AE ++E+ +I Sbjct: 132 QPKYILDMCTGSGCIAIACAYAFPDAEVDAVD-----ISPDALAVAEHNIEEHGLIHHVT 186 Query: 447 FLRFPTLPFIPKLPYDVLATD 385 +R +PK+ YD++ T+ Sbjct: 187 PIRSDLFRDLPKVQYDLIVTN 207
>YFCB_SALTI (P0A294) Hypothetical adenine-specific methylase yfcB (EC 2.1.1.72)| Length = 310 Score = 30.8 bits (68), Expect = 4.1 Identities = 19/81 (23%), Positives = 37/81 (45%) Frame = -1 Query: 627 QGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEEMISSKC 448 Q Y D G+ + C + PD + + +S + +A AE ++E+ +I Sbjct: 132 QPKYILDMCTGSGCIAIACAYAFPDAEVDAVD-----ISPDALAVAEHNIEEHGLIHHVT 186 Query: 447 FLRFPTLPFIPKLPYDVLATD 385 +R +PK+ YD++ T+ Sbjct: 187 PIRSDLFRDLPKVQYDLIVTN 207
>YAN4_SCHPO (Q10070) Hypothetical protein C3H1.04c in chromosome I| Length = 601 Score = 30.4 bits (67), Expect = 5.4 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%) Frame = -1 Query: 528 KVQCLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAVVSGA-- 355 K +S AS + L K+ ++ S F FPTLP + A + N ++S Sbjct: 18 KPYLISYHVRASTQNALLKQTVLQSSSFKSFPTLP-------RLAARNISNSGILSRTTP 70 Query: 354 ---KDTSFIQIYSRTPNPGPEFIEKYKS 280 K S ++ YS PE + K +S Sbjct: 71 VIIKQISMVRSYSSGDVENPEILNKNES 98
>FOS_CHICK (P11939) Proto-oncogene protein c-fos (Cellular oncogene fos)| Length = 367 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/61 (32%), Positives = 28/61 (45%) Frame = -3 Query: 256 PEQDQGHAAGLRGVLGPASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEAR 77 P Q++GH G+ PA+ Y+R PG Q +GR V + P+ EE R Sbjct: 87 PSQNRGHPYGVPAPAPPAA----YSRPAV---LKAPGGRGQSIGRRGKVEQLSPEEEEKR 139 Query: 76 R 74 R Sbjct: 140 R 140
>COMD5_MOUSE (Q8R395) COMM domain-containing protein 5| Length = 224 Score = 30.4 bits (67), Expect = 5.4 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%) Frame = +1 Query: 424 RECRESQKALAADHLLL---LEISLGTSHVLLRQALHLPP 534 ++CRE+ + L A L L + L +H LL+QAL LPP Sbjct: 62 KDCREAVQHLGASANLSEERLAVLLAGTHTLLQQALRLPP 101
>EXFAB_CHICK (P21760) Extracellular fatty acid-binding protein precursor| (Ex-FABP) (Quiescence-specific protein) (p20K) (Ch21 protein) Length = 178 Score = 30.4 bits (67), Expect = 5.4 Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 5/72 (6%) Frame = -1 Query: 402 DVLATDYDNYAV-----VSGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIKD 238 +VL TDY +YAV V + +++YSR+ P + ++ A Y + Sbjct: 107 EVLDTDYKSYAVIFATRVKDGRTLHMMRLYSRSREVSPTAMAIFRKLARERNYTDEMVAV 166 Query: 237 TPQDCEVSSDQL 202 P E S D++ Sbjct: 167 LPSQEECSVDEV 178
>ICYB_MANSE (Q00630) Insecticyanin B form precursor (Blue biliprotein) (INS-b)| Length = 206 Score = 30.4 bits (67), Expect = 5.4 Identities = 32/111 (28%), Positives = 50/111 (45%) Frame = -1 Query: 699 GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQ 520 G W E+A L QG+ CT Y +D K ++ +F V+G + Y+ G Sbjct: 42 GAWHEIAKLPLENENQGK----CTIAEYKYDGKKASV-YNSFVVNGVKE-YMEG------ 89 Query: 519 CLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYDNYAV 367 E A+ + + +++ K R L +P+ VLATDY NYA+ Sbjct: 90 --DLEIAPDAKYTKQGKYVMTFKFGQRVVNL-----VPW-VLATDYKNYAI 132
>FOS_PIG (O97930) Proto-oncogene protein c-fos (Cellular oncogene fos)| Length = 380 Score = 30.4 bits (67), Expect = 5.4 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 208 PASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEARR 74 P + Y+R G K +PG AQ +GR V + P+ EE RR Sbjct: 99 PTPSAGAYSR--AGAVKTMPGGRAQSIGRRGKVEQLSPEEEEKRR 141
>MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) (Proteolipid| protein-binding protein) (PLPB1) Length = 1121 Score = 30.4 bits (67), Expect = 5.4 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 Query: 172 RGPDKPVPGPEAQVVGRVRPVHERDPDPEEARRSV 68 RGP+ P P PE V+ VR ++D D + +V Sbjct: 329 RGPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTV 363
>FOS_AVINK (P23050) p55-v-Fos transforming protein| Length = 322 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/61 (32%), Positives = 28/61 (45%) Frame = -3 Query: 256 PEQDQGHAAGLRGVLGPASADDVYARDGRGPDKPVPGPEAQVVGRVRPVHERDPDPEEAR 77 P Q++GH G+ PA+ Y+R PG Q +GR V + P+ EE R Sbjct: 42 PSQNRGHPYGVPAPAPPAA----YSRPAV---LKAPGGRGQSIGRRGKVEQLSPEEEEKR 94 Query: 76 R 74 R Sbjct: 95 R 95
>YR877_MIMIV (Q5URA7) Putative lipocalin R877 precursor| Length = 169 Score = 30.0 bits (66), Expect = 7.1 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 1/153 (0%) Frame = -1 Query: 699 GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQ 520 G W+E+A L F Q+ C + Y E I+V C I G++ Sbjct: 35 GTWYEIARLPTSF----QKGCVNSTANYQLLEP-NKIQVTNNCE----------INGRIN 79 Query: 519 CLSQEDMASAETDLEKEEMISSKCFLRFPTLPFIPKLPYDVLATDYD-NYAVVSGAKDTS 343 ++ + +A T + + + + F PY+V+ D + YA+VSG DT Sbjct: 80 SVTGTAIPAANTRIVSGFLTPASLMVNFG----YGFSPYNVIFIDENYQYAIVSGGNDT- 134 Query: 342 FIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKI 244 + I SR N + + GYD + + Sbjct: 135 -LWILSRFKNINQSTYNQLVTIVYNQGYDVNNL 166
>YFCB_ECOLI (P39199) Hypothetical adenine-specific methylase yfcB (EC 2.1.1.72)| Length = 310 Score = 30.0 bits (66), Expect = 7.1 Identities = 18/81 (22%), Positives = 38/81 (46%) Frame = -1 Query: 627 QGVYTFDEKAGAIKVETFCVHGSPDGYITGIRGKVQCLSQEDMASAETDLEKEEMISSKC 448 Q + D G+ + C + PD + + +S + +A AE ++E+ +I + Sbjct: 132 QPQHILDMCTGSGCIAIACAYAFPDAEVDAVD-----ISPDALAVAEQNIEEHGLIHNVI 186 Query: 447 FLRFPTLPFIPKLPYDVLATD 385 +R +PK+ YD++ T+ Sbjct: 187 PIRSDLFRDLPKVQYDLIVTN 207
>EFG_COXBU (Q83ES7) Elongation factor G (EF-G)| Length = 699 Score = 29.6 bits (65), Expect = 9.2 Identities = 21/56 (37%), Positives = 27/56 (48%) Frame = -3 Query: 691 VRGSIAQTRVRWSGTRRLPLYSGGVYI**EGGRDQGGDILCPWLTRWIHHRYPGEG 524 V ++ + RV + T R + G YI GGR Q GD+ WL I R PG G Sbjct: 479 VEANVGKPRVAYRETIRRSVEQQGKYIRQTGGRGQYGDV---WLR--IEPREPGAG 529
>MUP3_MOUSE (P04939) Major urinary protein 3 precursor (MUP 3) (Non-group| 1/group 2 MUP15) Length = 184 Score = 29.6 bits (65), Expect = 9.2 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 5/61 (8%) Frame = -1 Query: 405 YDVLATDYDNYAVV-----SGAKDTSFIQIYSRTPNPGPEFIEKYKSYAAGFGYDPSKIK 241 + +L TDYDNY ++ K +++Y R P+ + EK+ G I Sbjct: 112 FSILKTDYDNYIMIHLINKKDGKTFQLMELYGREPDLSLDIKEKFAKLCEEHGIIRENII 171 Query: 240 D 238 D Sbjct: 172 D 172
>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2| Length = 1516 Score = 29.6 bits (65), Expect = 9.2 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = -3 Query: 292 EVQVICCRLRLRPEQDQGHAAGLRGVLGPASADDVYARDGRGPD 161 EVQ +C L P Q H + VLG A D + R RGPD Sbjct: 1451 EVQALCHHLATGPGQLSFHKGDILRVLGRAGGD--WLRCSRGPD 1492 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,514,919 Number of Sequences: 219361 Number of extensions: 2103270 Number of successful extensions: 6455 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 6068 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6425 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
