| Clone Name | rbaal24j10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ223006.1| Hordeum vulgare chloroplast lipocalin (CHL) mRNA, complete cds; nuclear gene for chloroplast product Length = 1013 Score = 1249 bits (630), Expect = 0.0 Identities = 639/642 (99%) Strand = Plus / Minus Query: 58 ttacttgaaatacacttcggcgagcttcttcagggtctgggtcacgctcgtgaacgggtc 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 ttacttgaaatacacttcggcgagcttcttcagggtctgggtcacgctcgtgaacgggtc 954 Query: 118 gaacgcgaccgacgacttgagcttcaggtccgggaactggtttgtcagggcctcgtccat 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 gaacgcgaccgacgacttgagcttcaggtccgggaactggtttgtcagggcctcgtccat 894 Query: 178 cccgggcatagacatcatctgcgctagctggtccgaggacacctcgcagtcctgcggcgt 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 cccgggcatagacatcatctgcgctagctggtccgaggacacctcgcagtcctgcggcgt 834 Query: 238 gtccttgatcttgctcgggtcgtagccgaagccggcagcatatgacttgtacttctcgat 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 gtccttgatcttgctcgggtcgtagccgaagccggcagcatatgacttgtacttctcgat 774 Query: 298 gaactccggtccgggatttggtgttcttgagtatatctgaataaagcttgtgtccttcgc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gaactccggtccgggatttggtgttcttgagtatatctgaataaagcttgtgtccttcgc 714 Query: 358 tccagacacaacggcgtaattgtcatagtcagttgctaggacatcatagggtagcttggg 417 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 tccagacacgacggcgtaattgtcatagtcagttgctaggacatcatagggtagcttggg 654 Query: 418 tatgaacgggagtgtcgggaatcgcagaaagcacttgctgctgatcatctcctccttctc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 tatgaacgggagtgtcgggaatcgcagaaagcacttgctgctgatcatctcctccttctc 594 Query: 478 gagatcagtctcggcactagccatgtcctcttgagacaggcattgcaccttcccccggat 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 gagatcagtctcggcactagccatgtcctcttgagacaggcattgcaccttcccccggat 534 Query: 538 accggtgatgtatccatcgggtgagccatggacacagaatgtctccaccttgatcgcgcc 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 accggtgatgtatccatcgggtgagccatggacacagaatgtctccaccttgatcgcgcc 474 Query: 598 cgccttctcatcaaatgtatacaccccctgagtacaatggcagtcttcttgtccctgacc 657 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 473 cgccttctcatcaaatgtatacactccctgagtacaatggcagtcttcttgtccctgacc 414 Query: 658 agcgaacccgcgtttgagcgatgctacctcgaaccacctacc 699 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 413 agcaaacccgcgtttgagcgatgctacctcgaaccacctacc 372
>gb|DQ223009.1| Triticum aestivum chloroplast lipocalin (CHL) mRNA, complete cds; nuclear gene for chloroplast product Length = 1020 Score = 997 bits (503), Expect = 0.0 Identities = 605/639 (94%) Strand = Plus / Minus Query: 58 ttacttgaaatacacttcggcgagcttcttcagggtctgggtcacgctcgtgaacgggtc 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 ttacttgaaatacacttcggcgagcttcttcagggtctgggtcacgctcgtgaacgggtc 961 Query: 118 gaacgcgaccgacgacttgagcttcaggtccgggaactggtttgtcagggcctcgtccat 177 |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct: 960 gaacgcgaccgacgacttgagcttcaggtccgggaactggttcgtcagggcctggtccat 901 Query: 178 cccgggcatagacatcatctgcgctagctggtccgaggacacctcgcagtcctgcggcgt 237 ||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 900 cccgggcatggacatcatctccgcaagctggtccgaggacacctcgcagtcctgcggcgt 841 Query: 238 gtccttgatcttgctcgggtcgtagccgaagccggcagcatatgacttgtacttctcgat 297 |||||||||||||||| | |||||||||||||| || || || ||||||||||||||||| Sbjct: 840 gtccttgatcttgctcagatcgtagccgaagccagcggcgtacgacttgtacttctcgat 781 Query: 298 gaactccggtccgggatttggtgttcttgagtatatctgaataaagcttgtgtccttcgc 357 |||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || Sbjct: 780 gaactccggtccagggtttggtgttcttgagtatatctgaataaagctggtgtcctttgc 721 Query: 358 tccagacacaacggcgtaattgtcatagtcagttgctaggacatcatagggtagcttggg 417 ||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 720 tccagacacgacggcgtaattgtcatagtcagtcgccaggacatcatagggtagcttggg 661 Query: 418 tatgaacgggagtgtcgggaatcgcagaaagcacttgctgctgatcatctcctccttctc 477 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 660 tatgaaggggagtgtcgggaagcgcagaaagcacttgctgctgatcatctcctccctctc 601 Query: 478 gagatcagtctcggcactagccatgtcctcttgagacaggcattgcaccttcccccggat 537 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 600 aagatcagtctcggcaccagccatgtcttcttgagacaggcattgcaccttcccccggat 541 Query: 538 accggtgatgtatccatcgggtgagccatggacacagaatgtctccaccttgatcgcgcc 597 ||||||||||||||| || ||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 540 accggtgatgtatccgtcaggtgaaccatggacacagaatgtctccaccttgattgcgcc 481 Query: 598 cgccttctcatcaaatgtatacaccccctgagtacaatggcagtcttcttgtccctgacc 657 |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 480 cgccttctcatcaaatgtatacactccctgagtacaatggcagtcctcttgcccctgacc 421 Query: 658 agcgaacccgcgtttgagcgatgctacctcgaaccacct 696 ||||||||||| |||| ||||||| |||||||||||||| Sbjct: 420 agcgaacccgcctttgcgcgatgccacctcgaaccacct 382
>ref|XM_473969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 412 bits (208), Expect = e-112 Identities = 477/566 (84%), Gaps = 3/566 (0%) Strand = Plus / Minus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 1352 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 1293 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 1292 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 1233 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 1232 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 1173 Query: 314 tttggtgttcttgagtatatctgaataaagcttgtgtccttcgctccagacacaacggcg 373 || |||||||||||||||||||| |||||||||||||| || || ||||||||||||||| Sbjct: 1172 ttaggtgttcttgagtatatctggataaagcttgtgtctttagcaccagacacaacggcg 1113 Query: 374 taattgtcatagtcagttgctaggacatcatagggtagcttgggtatgaacgggagtgtc 433 ||||||||||| || ||||| || |||||||| ||| |||||||||||| || ||||| Sbjct: 1112 taattgtcataatcggttgcaagcacatcataaggttccttgggtatgaatggtagtgtg 1053 Query: 434 gggaatcgcagaaagcacttgctgctgatcatctcctccttctcgagatcagtctcggca 493 ||||| || |||||||| || | |||||||||||| | | || ||||| ||||| ||| Sbjct: 1052 gggaaacggagaaagcatttccccttgatcatctcctgcctttcaagatctgtctcagca 993 Query: 494 ctagccatgtcctcttgagacaggcattgcaccttcccccggataccggtgatgtatcca 553 || ||||||||||||| ||||||||||||||| | ||||| |||||||||||||| ||| Sbjct: 992 ctcgccatgtcctcttcggacaggcattgcacccttccccgaataccggtgatgtaacca 933 Query: 554 tcgggtgagccatggacacagaatgtctccaccttgatcgcgcccgccttctcatcaaat 613 || ||| ||||| ||||||||||| ||||||| ||| | || | |||||||||||| Sbjct: 932 tcaggtccaccatgaacacagaatgtgtccacctggattgagcgtgatttctcatcaaat 873 Query: 614 gtatacaccccctgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttg 673 | |||||||||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 872 gaatacaccccctgagtacagtgacagtcctcttgtccctgaccagcaaagccacgtttc 813 Query: 674 agcgatgctacctcgaaccacctacc 699 ||||||||||| |||||||| ||||| Sbjct: 812 agcgatgctacttcgaaccatctacc 787
>dbj|AK104663.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-G03, full insert sequence Length = 1205 Score = 412 bits (208), Expect = e-112 Identities = 477/566 (84%), Gaps = 3/566 (0%) Strand = Plus / Minus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 1054 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 995 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 994 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 935 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 934 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 875 Query: 314 tttggtgttcttgagtatatctgaataaagcttgtgtccttcgctccagacacaacggcg 373 || |||||||||||||||||||| |||||||||||||| || || ||||||||||||||| Sbjct: 874 ttaggtgttcttgagtatatctggataaagcttgtgtctttagcaccagacacaacggcg 815 Query: 374 taattgtcatagtcagttgctaggacatcatagggtagcttgggtatgaacgggagtgtc 433 ||||||||||| || ||||| || |||||||| ||| |||||||||||| || ||||| Sbjct: 814 taattgtcataatcggttgcaagcacatcataaggttccttgggtatgaatggtagtgtg 755 Query: 434 gggaatcgcagaaagcacttgctgctgatcatctcctccttctcgagatcagtctcggca 493 ||||| || |||||||| || | |||||||||||| | | || ||||| ||||| ||| Sbjct: 754 gggaaacggagaaagcatttccccttgatcatctcctgcctttcaagatctgtctcagca 695 Query: 494 ctagccatgtcctcttgagacaggcattgcaccttcccccggataccggtgatgtatcca 553 || ||||||||||||| ||||||||||||||| | ||||| |||||||||||||| ||| Sbjct: 694 ctcgccatgtcctcttcggacaggcattgcacccttccccgaataccggtgatgtaacca 635 Query: 554 tcgggtgagccatggacacagaatgtctccaccttgatcgcgcccgccttctcatcaaat 613 || ||| ||||| ||||||||||| ||||||| ||| | || | |||||||||||| Sbjct: 634 tcaggtccaccatgaacacagaatgtgtccacctggattgagcgtgatttctcatcaaat 575 Query: 614 gtatacaccccctgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttg 673 | |||||||||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 574 gaatacaccccctgagtacagtgacagtcctcttgtccctgaccagcaaagccacgtttc 515 Query: 674 agcgatgctacctcgaaccacctacc 699 ||||||||||| |||||||| ||||| Sbjct: 514 agcgatgctacttcgaaccatctacc 489
>dbj|AK104062.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-A06, full insert sequence Length = 1173 Score = 412 bits (208), Expect = e-112 Identities = 477/566 (84%), Gaps = 3/566 (0%) Strand = Plus / Minus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 1008 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 949 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 948 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 889 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 888 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 829 Query: 314 tttggtgttcttgagtatatctgaataaagcttgtgtccttcgctccagacacaacggcg 373 || |||||||||||||||||||| |||||||||||||| || || ||||||||||||||| Sbjct: 828 ttaggtgttcttgagtatatctggataaagcttgtgtctttagcaccagacacaacggcg 769 Query: 374 taattgtcatagtcagttgctaggacatcatagggtagcttgggtatgaacgggagtgtc 433 ||||||||||| || ||||| || |||||||| ||| |||||||||||| || ||||| Sbjct: 768 taattgtcataatcggttgcaagcacatcataaggttccttgggtatgaatggtagtgtg 709 Query: 434 gggaatcgcagaaagcacttgctgctgatcatctcctccttctcgagatcagtctcggca 493 ||||| || |||||||| || | |||||||||||| | | || ||||| ||||| ||| Sbjct: 708 gggaaacggagaaagcatttccccttgatcatctcctgcctttcaagatctgtctcagca 649 Query: 494 ctagccatgtcctcttgagacaggcattgcaccttcccccggataccggtgatgtatcca 553 || ||||||||||||| ||||||||||||||| | ||||| |||||||||||||| ||| Sbjct: 648 ctcgccatgtcctcttcggacaggcattgcacccttccccgaataccggtgatgtaacca 589 Query: 554 tcgggtgagccatggacacagaatgtctccaccttgatcgcgcccgccttctcatcaaat 613 || ||| ||||| ||||||||||| ||||||| ||| | || | |||||||||||| Sbjct: 588 tcaggtccaccatgaacacagaatgtgtccacctggattgagcgtgatttctcatcaaat 529 Query: 614 gtatacaccccctgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttg 673 | |||||||||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 528 gaatacaccccctgagtacagtgacagtcctcttgtccctgaccagcaaagccacgtttc 469 Query: 674 agcgatgctacctcgaaccacctacc 699 ||||||||||| |||||||| ||||| Sbjct: 468 agcgatgctacttcgaaccatctacc 443
>dbj|AK100069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164B14, full insert sequence Length = 1190 Score = 412 bits (208), Expect = e-112 Identities = 477/566 (84%), Gaps = 3/566 (0%) Strand = Plus / Minus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 1045 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 986 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 985 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 926 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 925 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 866 Query: 314 tttggtgttcttgagtatatctgaataaagcttgtgtccttcgctccagacacaacggcg 373 || |||||||||||||||||||| |||||||||||||| || || ||||||||||||||| Sbjct: 865 ttaggtgttcttgagtatatctggataaagcttgtgtctttagcaccagacacaacggcg 806 Query: 374 taattgtcatagtcagttgctaggacatcatagggtagcttgggtatgaacgggagtgtc 433 ||||||||||| || ||||| || |||||||| ||| |||||||||||| || ||||| Sbjct: 805 taattgtcataatcggttgcaagcacatcataaggttccttgggtatgaatggtagtgtg 746 Query: 434 gggaatcgcagaaagcacttgctgctgatcatctcctccttctcgagatcagtctcggca 493 ||||| || |||||||| || | |||||||||||| | | || ||||| ||||| ||| Sbjct: 745 gggaaacggagaaagcatttccccttgatcatctcctgcctttcaagatctgtctcagca 686 Query: 494 ctagccatgtcctcttgagacaggcattgcaccttcccccggataccggtgatgtatcca 553 || ||||||||||||| ||||||||||||||| | ||||| |||||||||||||| ||| Sbjct: 685 ctcgccatgtcctcttcggacaggcattgcacccttccccgaataccggtgatgtaacca 626 Query: 554 tcgggtgagccatggacacagaatgtctccaccttgatcgcgcccgccttctcatcaaat 613 || ||| ||||| ||||||||||| ||||||| ||| | || | |||||||||||| Sbjct: 625 tcaggtccaccatgaacacagaatgtgtccacctggattgagcgtgatttctcatcaaat 566 Query: 614 gtatacaccccctgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttg 673 | |||||||||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 565 gaatacaccccctgagtacagtgacagtcctcttgtccctgaccagcaaagccacgtttc 506 Query: 674 agcgatgctacctcgaaccacctacc 699 ||||||||||| |||||||| ||||| Sbjct: 505 agcgatgctacttcgaaccatctacc 480
>dbj|AK059851.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G09, full insert sequence Length = 1212 Score = 412 bits (208), Expect = e-112 Identities = 477/566 (84%), Gaps = 3/566 (0%) Strand = Plus / Minus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 1065 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 1006 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 1005 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 946 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 945 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 886 Query: 314 tttggtgttcttgagtatatctgaataaagcttgtgtccttcgctccagacacaacggcg 373 || |||||||||||||||||||| |||||||||||||| || || ||||||||||||||| Sbjct: 885 ttaggtgttcttgagtatatctggataaagcttgtgtctttagcaccagacacaacggcg 826 Query: 374 taattgtcatagtcagttgctaggacatcatagggtagcttgggtatgaacgggagtgtc 433 ||||||||||| || ||||| || |||||||| ||| |||||||||||| || ||||| Sbjct: 825 taattgtcataatcggttgcaagcacatcataaggttccttgggtatgaatggtagtgtg 766 Query: 434 gggaatcgcagaaagcacttgctgctgatcatctcctccttctcgagatcagtctcggca 493 ||||| || |||||||| || | |||||||||||| | | || ||||| ||||| ||| Sbjct: 765 gggaaacggagaaagcatttccccttgatcatctcctgcctttcaagatctgtctcagca 706 Query: 494 ctagccatgtcctcttgagacaggcattgcaccttcccccggataccggtgatgtatcca 553 || ||||||||||||| ||||||||||||||| | ||||| |||||||||||||| ||| Sbjct: 705 ctcgccatgtcctcttcggacaggcattgcacccttccccgaataccggtgatgtaacca 646 Query: 554 tcgggtgagccatggacacagaatgtctccaccttgatcgcgcccgccttctcatcaaat 613 || ||| ||||| ||||||||||| ||||||| ||| | || | |||||||||||| Sbjct: 645 tcaggtccaccatgaacacagaatgtgtccacctggattgagcgtgatttctcatcaaat 586 Query: 614 gtatacaccccctgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttg 673 | |||||||||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 585 gaatacaccccctgagtacagtgacagtcctcttgtccctgaccagcaaagccacgtttc 526 Query: 674 agcgatgctacctcgaaccacctacc 699 ||||||||||| |||||||| ||||| Sbjct: 525 agcgatgctacttcgaaccatctacc 500
>gb|DQ223005.1| Sorghum bicolor chloroplast lipocalin (CHL) mRNA, complete cds; nuclear gene for chloroplast product Length = 1023 Score = 412 bits (208), Expect = e-112 Identities = 468/554 (84%), Gaps = 3/554 (0%) Strand = Plus / Minus Query: 149 gggaactggtttgtcagggcctcgtccatcccgggcatagacatcatctgcgctagctgg 208 |||||||| || |||||||| |||| |||||||||||| ||||||||| || | |||| Sbjct: 932 gggaactgattcgtcagggcttcgttcatcccgggcatcgacatcatcaaggcaatctgg 873 Query: 209 tccgaggacac---ctcgcagtcctgcggcgtgtccttgatcttgctcgggtcgtagccg 265 || ||||||| ||||||||| || || ||||||||||||||||| ||||| |||||| Sbjct: 872 tctgaggacatgtactcgcagtcttgaggggtgtccttgatcttgcttgggtcatagccg 813 Query: 266 aagccggcagcatatgacttgtacttctcgatgaactccggtccgggatttggtgttctt 325 ||| |||| |||| |||||||||||||| ||||| || || ||||| || ||||||||| Sbjct: 812 aagttggcaacataggacttgtacttctcaatgaattctggcccggggttgggtgttctt 753 Query: 326 gagtatatctgaataaagcttgtgtccttcgctccagacacaacggcgtaattgtcatag 385 ||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||||| Sbjct: 752 gagtatatctgaataaagcttgtatccttagctccagacacaactgcataattgtcatag 693 Query: 386 tcagttgctaggacatcatagggtagcttgggtatgaacgggagtgtcgggaatcgcaga 445 |||||||| |||||||||||||| |||||||||||| || || || ||||| || ||| Sbjct: 692 tcagttgcaaggacatcatagggctccttgggtatgaatggcagcgtggggaaccggaga 633 Query: 446 aagcacttgctgctgatcatctcctccttctcgagatcagtctcggcactagccatgtcc 505 ||||| || | ||||||||||| | |||| ||||| ||||| ||||| | ||||||| Sbjct: 632 aagcatttctcacggatcatctcctgcctctcaagatctgtctcagcacttgacatgtcc 573 Query: 506 tcttgagacaggcattgcaccttcccccggataccggtgatgtatccatcgggtgagcca 565 |||| ||||||||||||||| ||||||| ||||| |||||||||||||| ||| ||| Sbjct: 572 tcttcggacaggcattgcaccctcccccgaataccagtgatgtatccatcaggtccacca 513 Query: 566 tggacacagaatgtctccaccttgatcgcgcccgccttctcatcaaatgtatacaccccc 625 |||||||||||||| ||||||| ||| | || | ||||||||| || | ||||| ||| Sbjct: 512 tggacacagaatgtatccacctggattgagcgtgacttctcatcgaacgagtacactccc 453 Query: 626 tgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttgagcgatgctacc 685 ||||||||||| ||||||||||||||||||||||| || || ||||| ||||| |||||| Sbjct: 452 tgagtacaatgacagtcttcttgtccctgaccagcaaatccacgtttcagcgaggctacc 393 Query: 686 tcgaaccacctacc 699 || ||||| ||||| Sbjct: 392 tcaaaccatctacc 379
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence Length = 64224 Score = 202 bits (102), Expect = 1e-48 Identities = 243/290 (83%) Strand = Plus / Plus Query: 338 ataaagcttgtgtccttcgctccagacacaacggcgtaattgtcatagtcagttgctagg 397 |||||||||||||| || || |||||||||||||||||||||||||| || ||||| || Sbjct: 44161 ataaagcttgtgtctttagcaccagacacaacggcgtaattgtcataatcggttgcaagc 44220 Query: 398 acatcatagggtagcttgggtatgaacgggagtgtcgggaatcgcagaaagcacttgctg 457 |||||||| ||| |||||||||||| || ||||| ||||| || |||||||| || | Sbjct: 44221 acatcataaggttccttgggtatgaatggtagtgtggggaaacggagaaagcatttcccc 44280 Query: 458 ctgatcatctcctccttctcgagatcagtctcggcactagccatgtcctcttgagacagg 517 |||||||||||| | | || ||||| ||||| ||||| ||||||||||||| |||||| Sbjct: 44281 ttgatcatctcctgcctttcaagatctgtctcagcactcgccatgtcctcttcggacagg 44340 Query: 518 cattgcaccttcccccggataccggtgatgtatccatcgggtgagccatggacacagaat 577 ||||||||| | ||||| |||||||||||||| ||||| ||| ||||| ||||||||| Sbjct: 44341 cattgcacccttccccgaataccggtgatgtaaccatcaggtccaccatgaacacagaat 44400 Query: 578 gtctccaccttgatcgcgcccgccttctcatcaaatgtatacaccccctg 627 || ||||||| ||| | || | ||||||||||||| |||||||||||| Sbjct: 44401 gtgtccacctggattgagcgtgatttctcatcaaatgaatacaccccctg 44450 Score = 147 bits (74), Expect = 6e-32 Identities = 172/204 (84%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 43697 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 43756 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 43757 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 43816 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 43817 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 43876 Query: 314 tttggtgttcttgagtatatctga 337 || ||||||||||||||||||||| Sbjct: 43877 ttaggtgttcttgagtatatctga 43900 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 624 cctgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttgagcgatgcta 683 |||||||||| || ||||| ||||||||||||||||| || || ||||| |||||||||| Sbjct: 44672 cctgagtacagtgacagtcctcttgtccctgaccagcaaagccacgtttcagcgatgcta 44731 Query: 684 cctcgaaccacctacc 699 | |||||||| ||||| Sbjct: 44732 cttcgaaccatctacc 44747
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 202 bits (102), Expect = 1e-48 Identities = 243/290 (83%) Strand = Plus / Plus Query: 338 ataaagcttgtgtccttcgctccagacacaacggcgtaattgtcatagtcagttgctagg 397 |||||||||||||| || || |||||||||||||||||||||||||| || ||||| || Sbjct: 55909 ataaagcttgtgtctttagcaccagacacaacggcgtaattgtcataatcggttgcaagc 55968 Query: 398 acatcatagggtagcttgggtatgaacgggagtgtcgggaatcgcagaaagcacttgctg 457 |||||||| ||| |||||||||||| || ||||| ||||| || |||||||| || | Sbjct: 55969 acatcataaggttccttgggtatgaatggtagtgtggggaaacggagaaagcatttcccc 56028 Query: 458 ctgatcatctcctccttctcgagatcagtctcggcactagccatgtcctcttgagacagg 517 |||||||||||| | | || ||||| ||||| ||||| ||||||||||||| |||||| Sbjct: 56029 ttgatcatctcctgcctttcaagatctgtctcagcactcgccatgtcctcttcggacagg 56088 Query: 518 cattgcaccttcccccggataccggtgatgtatccatcgggtgagccatggacacagaat 577 ||||||||| | ||||| |||||||||||||| ||||| ||| ||||| ||||||||| Sbjct: 56089 cattgcacccttccccgaataccggtgatgtaaccatcaggtccaccatgaacacagaat 56148 Query: 578 gtctccaccttgatcgcgcccgccttctcatcaaatgtatacaccccctg 627 || ||||||| ||| | || | ||||||||||||| |||||||||||| Sbjct: 56149 gtgtccacctggattgagcgtgatttctcatcaaatgaatacaccccctg 56198 Score = 147 bits (74), Expect = 6e-32 Identities = 172/204 (84%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 55445 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 55504 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 55505 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 55564 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 55565 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 55624 Query: 314 tttggtgttcttgagtatatctga 337 || ||||||||||||||||||||| Sbjct: 55625 ttaggtgttcttgagtatatctga 55648 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 624 cctgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttgagcgatgcta 683 |||||||||| || ||||| ||||||||||||||||| || || ||||| |||||||||| Sbjct: 56420 cctgagtacagtgacagtcctcttgtccctgaccagcaaagccacgtttcagcgatgcta 56479 Query: 684 cctcgaaccacctacc 699 | |||||||| ||||| Sbjct: 56480 cttcgaaccatctacc 56495
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 202 bits (102), Expect = 1e-48 Identities = 243/290 (83%) Strand = Plus / Plus Query: 338 ataaagcttgtgtccttcgctccagacacaacggcgtaattgtcatagtcagttgctagg 397 |||||||||||||| || || |||||||||||||||||||||||||| || ||||| || Sbjct: 31883043 ataaagcttgtgtctttagcaccagacacaacggcgtaattgtcataatcggttgcaagc 31883102 Query: 398 acatcatagggtagcttgggtatgaacgggagtgtcgggaatcgcagaaagcacttgctg 457 |||||||| ||| |||||||||||| || ||||| ||||| || |||||||| || | Sbjct: 31883103 acatcataaggttccttgggtatgaatggtagtgtggggaaacggagaaagcatttcccc 31883162 Query: 458 ctgatcatctcctccttctcgagatcagtctcggcactagccatgtcctcttgagacagg 517 |||||||||||| | | || ||||| ||||| ||||| ||||||||||||| |||||| Sbjct: 31883163 ttgatcatctcctgcctttcaagatctgtctcagcactcgccatgtcctcttcggacagg 31883222 Query: 518 cattgcaccttcccccggataccggtgatgtatccatcgggtgagccatggacacagaat 577 ||||||||| | ||||| |||||||||||||| ||||| ||| ||||| ||||||||| Sbjct: 31883223 cattgcacccttccccgaataccggtgatgtaaccatcaggtccaccatgaacacagaat 31883282 Query: 578 gtctccaccttgatcgcgcccgccttctcatcaaatgtatacaccccctg 627 || ||||||| ||| | || | ||||||||||||| |||||||||||| Sbjct: 31883283 gtgtccacctggattgagcgtgatttctcatcaaatgaatacaccccctg 31883332 Score = 147 bits (74), Expect = 6e-32 Identities = 172/204 (84%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 31882579 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 31882638 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 31882639 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 31882698 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 31882699 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 31882758 Query: 314 tttggtgttcttgagtatatctga 337 || ||||||||||||||||||||| Sbjct: 31882759 ttaggtgttcttgagtatatctga 31882782 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 624 cctgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttgagcgatgcta 683 |||||||||| || ||||| ||||||||||||||||| || || ||||| |||||||||| Sbjct: 31883554 cctgagtacagtgacagtcctcttgtccctgaccagcaaagccacgtttcagcgatgcta 31883613 Query: 684 cctcgaaccacctacc 699 | |||||||| ||||| Sbjct: 31883614 cttcgaaccatctacc 31883629
>dbj|AK101027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F02, full insert sequence Length = 3504 Score = 202 bits (102), Expect = 1e-48 Identities = 243/290 (83%) Strand = Plus / Plus Query: 338 ataaagcttgtgtccttcgctccagacacaacggcgtaattgtcatagtcagttgctagg 397 |||||||||||||| || || |||||||||||||||||||||||||| || ||||| || Sbjct: 570 ataaagcttgtgtctttagcaccagacacaacggcgtaattgtcataatcggttgcaagc 629 Query: 398 acatcatagggtagcttgggtatgaacgggagtgtcgggaatcgcagaaagcacttgctg 457 |||||||| ||| |||||||||||| || ||||| ||||| || |||||||| || | Sbjct: 630 acatcataaggttccttgggtatgaatggtagtgtggggaaacggagaaagcatttcccc 689 Query: 458 ctgatcatctcctccttctcgagatcagtctcggcactagccatgtcctcttgagacagg 517 |||||||||||| | | || ||||| ||||| ||||| ||||||||||||| |||||| Sbjct: 690 ttgatcatctcctgcctttcaagatctgtctcagcactcgccatgtcctcttcggacagg 749 Query: 518 cattgcaccttcccccggataccggtgatgtatccatcgggtgagccatggacacagaat 577 ||||||||| | ||||| |||||||||||||| ||||| ||| ||||| ||||||||| Sbjct: 750 cattgcacccttccccgaataccggtgatgtaaccatcaggtccaccatgaacacagaat 809 Query: 578 gtctccaccttgatcgcgcccgccttctcatcaaatgtatacaccccctg 627 || ||||||| ||| | || | ||||||||||||| |||||||||||| Sbjct: 810 gtgtccacctggattgagcgtgatttctcatcaaatgaatacaccccctg 859 Score = 147 bits (74), Expect = 6e-32 Identities = 172/204 (84%), Gaps = 3/204 (1%) Strand = Plus / Plus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 230 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 289 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 290 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 349 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 350 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 409 Query: 314 tttggtgttcttgagtatatctga 337 || ||||||||||||||||||||| Sbjct: 410 ttaggtgttcttgagtatatctga 433 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 624 cctgagtacaatggcagtcttcttgtccctgaccagcgaacccgcgtttgagcgatgcta 683 |||||||||| || ||||| ||||||||||||||||| || || ||||| |||||||||| Sbjct: 1081 cctgagtacagtgacagtcctcttgtccctgaccagcaaagccacgtttcagcgatgcta 1140 Query: 684 cctcgaaccacctacc 699 | |||||||| ||||| Sbjct: 1141 cttcgaaccatctacc 1156
>dbj|AK058335.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-D02, full insert sequence Length = 378 Score = 190 bits (96), Expect = 4e-45 Identities = 206/242 (85%), Gaps = 3/242 (1%) Strand = Plus / Minus Query: 137 agcttcaggtccgggaactggtttgtcagggcctcgtccatcccgggcatagacatcatc 196 ||||||||||| |||||||| || |||| ||||| |||||| ||||| ||||||||| Sbjct: 242 agcttcaggtctgggaactgattcgtcaaagcctcagtcatcccaggcattgacatcatc 183 Query: 197 tgcgctagctggtccgaggaca---cctcgcagtcctgcggcgtgtccttgatcttgctc 253 | | |||||||||| ||||| ||||||| ||||| || |||||||||||||||||| Sbjct: 182 agaccaagctggtccgtggacatcacctcgcaatcctgtggggtgtccttgatcttgctc 123 Query: 254 gggtcgtagccgaagccggcagcatatgacttgtacttctcgatgaactccggtccggga 313 || || || |||||| |||||| || |||||||||||||||||||| || ||||| ||| Sbjct: 122 ggatcataaccgaagttggcagcgtaggacttgtacttctcgatgaattctggtccagga 63 Query: 314 tttggtgttcttgagtatatctgaataaagcttgtgtccttcgctccagacacaacggcg 373 || |||||||||||||||||||| |||||||||||||| || || ||||||||||||||| Sbjct: 62 ttaggtgttcttgagtatatctggataaagcttgtgtctttagcaccagacacaacggcg 3 Query: 374 ta 375 || Sbjct: 2 ta 1
>gb|DQ223007.1| Ipomoea nil chloroplast lipocalin (CHL) mRNA, complete cds; nuclear gene for chloroplast product Length = 1005 Score = 56.0 bits (28), Expect = 2e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 606 catcaaatgtatacaccccctgagtacaatggcagtcttcttgtccctgaccagcgaacc 665 ||||||||||||| | |||||| ||||| ||||| ||||| || || || ||||| |||| Sbjct: 454 catcaaatgtataaatcccctgggtacagtggcaatcttcctgaccttgtccagcaaacc 395 Query: 666 cgcgtttgagcgatgctacctcgaacca 693 ||||||| || || ||||| || ||||| Sbjct: 394 cgcgtttaagtgaagctacttcaaacca 367 Score = 52.0 bits (26), Expect = 0.003 Identities = 89/110 (80%) Strand = Plus / Minus Query: 284 ttgtacttctcgatgaactccggtccgggatttggtgttcttgagtatatctgaataaag 343 ||||||||||| |||||||| ||||| |||| ||||| || || || ||||||| |||| Sbjct: 776 ttgtacttctcaatgaactcgggtcctggatcaggtgtcctcgaataaatctgaacaaag 717 Query: 344 cttgtgtccttcgctccagacacaacggcgtaattgtcatagtcagttgc 393 || |||| || ||||| || || | |||| |||||||||| || ||||| Sbjct: 716 ctcttgtctttagctcctgaaactatggcgaaattgtcataatcggttgc 667
>gb|DQ223010.1| Glycine max chloroplast lipocalin (CHL) mRNA, complete cds; nuclear gene for chloroplast product Length = 990 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 281 gacttgtacttctcgatgaactccggtccgggatttggtgttcttgagtatatctgaata 340 ||||||||||||| || || || ||||| || || ||||| |||||||||||||||||| Sbjct: 761 gacttgtacttctgtataaattcaggtccagggttaggtgtccttgagtatatctgaata 702 Query: 341 aa 342 || Sbjct: 701 aa 700 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 607 atcaaatgtatacaccccctgagtacaatggcagtcttcttg 648 |||||||||||| || |||||||| ||||| ||||||||||| Sbjct: 435 atcaaatgtatatacaccctgagtgcaatgacagtcttcttg 394
>emb|X57921.1|OS12RG21R O.sativa random single-copy DNA fragment 12RG214R Length = 88 Score = 50.1 bits (25), Expect = 0.010 Identities = 55/65 (84%) Strand = Plus / Minus Query: 563 ccatggacacagaatgtctccaccttgatcgcgcccgccttctcatcaaatgtatacacc 622 ||||| ||||||||||| ||||||| ||| | || | ||||||||||||| ||||||| Sbjct: 68 ccatgaacacagaatgtgtccacctggattgagcgtgatttctcatcaaatgaatacacc 9 Query: 623 ccctg 627 ||||| Sbjct: 8 ccctg 4
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 252 tcgggtcgtagccgaagccggca 274 ||||||||||||||||||||||| Sbjct: 467440 tcgggtcgtagccgaagccggca 467462
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 250 gctcgggtcgtagccgaagccg 271 |||||||||||||||||||||| Sbjct: 6878271 gctcgggtcgtagccgaagccg 6878292
>gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, complete sequence Length = 190455 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 449 cacttgctgctgatcatctcctcct 473 |||||||||||| |||||||||||| Sbjct: 68320 cacttgctgctggtcatctcctcct 68296
>gb|DQ223008.1| Solanum tuberosum chloroplast lipocalin (CHL) mRNA, complete cds; nuclear gene for chloroplast product Length = 1002 Score = 42.1 bits (21), Expect = 2.4 Identities = 117/149 (78%) Strand = Plus / Minus Query: 284 ttgtacttctcgatgaactccggtccgggatttggtgttcttgagtatatctgaataaag 343 ||||||||||| || || || ||||| ||||| || || || ||||||||||||| ||| Sbjct: 773 ttgtacttctcaataaattctggtcctggattaggcgtcctcgagtatatctgaacgaag 714 Query: 344 cttgtgtccttcgctccagacacaacggcgtaattgtcatagtcagttgctaggacatca 403 ||| | || || |||||||| || | ||| | || ||||| |||||||| | |||||| Sbjct: 713 cttttatctttagctccagaaaccagtgcgaagttatcataatcagttgcaatcacatca 654 Query: 404 tagggtagcttgggtatgaacgggagtgt 432 || || |||||| |||||||| ||||| Sbjct: 653 taaggctccttggggatgaacggcagtgt 625
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 cttgaaatacacttcggcgagctt 84 ||||||||| |||||||||||||| Sbjct: 600118 cttgaaatagacttcggcgagctt 600141 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 588 tgatcgcgcccgccttctca 607 |||||||||||||||||||| Sbjct: 581970 tgatcgcgcccgccttctca 581989
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 103 gctcgtgaacgggtcgaacgcgac 126 ||||||||||||||||| |||||| Sbjct: 2977507 gctcgtgaacgggtcgagcgcgac 2977530
>emb|X60282.1|NTPR4BX N.tabacum mRNA for PR-4b protein Length = 641 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cgcagaaagcacttgctgct 459 |||||||||||||||||||| Sbjct: 166 cgcagaaagcacttgctgct 147
>emb|X60281.1|NTPR4AX N.tabacum mRNA for PR-4a protein Length = 645 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cgcagaaagcacttgctgct 459 |||||||||||||||||||| Sbjct: 166 cgcagaaagcacttgctgct 147
>emb|X58546.1|NTPR4A N.tabacum PR-4A mRNA for pathogenesis-related protein 4A Length = 686 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cgcagaaagcacttgctgct 459 |||||||||||||||||||| Sbjct: 175 cgcagaaagcacttgctgct 156
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 tcgggtcgtagccgaagccg 271 |||||||||||||||||||| Sbjct: 120965 tcgggtcgtagccgaagccg 120984
>ref|XM_572187.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 6825 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 cttgaaatacacttcggcgagctt 84 ||||||||| |||||||||||||| Sbjct: 4862 cttgaaatagacttcggcgagctt 4839
>ref|XM_571914.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 1039 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 tgatcgcgcccgccttctca 607 |||||||||||||||||||| Sbjct: 971 tgatcgcgcccgccttctca 952
>gb|AF138971.2| Semibalanus balanoides RNA polymerase II largest subunit mRNA, partial cds Length = 1873 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 atcatctcctccttctcgag 480 |||||||||||||||||||| Sbjct: 600 atcatctcctccttctcgag 581
>gb|AC135895.2| Homo sapiens 12 BAC RP11-168J19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 102539 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 tgctgatcatctcctccttc 475 |||||||||||||||||||| Sbjct: 65735 tgctgatcatctcctccttc 65754
>ref|XM_561075.1| Anopheles gambiae str. PEST ENSANGP00000027421 (ENSANGG00000023361), partial mRNA Length = 963 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cttcttcagggtctgggtca 101 |||||||||||||||||||| Sbjct: 120 cttcttcagggtctgggtca 101
>emb|X58547.1|NTPR4B N.tabacum PR-4B mRNA for pathogenesis-related protein 4B Length = 599 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cgcagaaagcacttgctgct 459 |||||||||||||||||||| Sbjct: 140 cgcagaaagcacttgctgct 121
>gb|AC110041.13| Mus musculus chromosome 8, clone RP23-276O15, complete sequence Length = 190535 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 567 ggacacagaatgtctccacc 586 |||||||||||||||||||| Sbjct: 81273 ggacacagaatgtctccacc 81292
>gb|AF026474.1|AF026474 Pleuronectes vetulus GTPase K-rasB proto-oncogene mRNA, complete cds Length = 810 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 cttcggcgtgaagaaggaaa 24 |||||||||||||||||||| Sbjct: 118 cttcggcgtgaagaaggaaa 137
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 tcgggtcgtagccgaagccg 271 |||||||||||||||||||| Sbjct: 1229062 tcgggtcgtagccgaagccg 1229043 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,518,085 Number of Sequences: 3902068 Number of extensions: 4518085 Number of successful extensions: 78317 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77939 Number of HSP's gapped (non-prelim): 348 length of query: 699 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 676 effective length of database: 17,143,297,704 effective search space: 11588869247904 effective search space used: 11588869247904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)