ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24i21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550092.1| Oryza sativa (japonica cultivar-group), mRNA 117 4e-23
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
3dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
4dbj|AK065031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
5dbj|AK062266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
6gb|AE012519.1| Xanthomonas campestris pv. campestris str. ATCC 3... 46 0.13
7gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 46 0.13
8dbj|AB040121.1| Bacillus sp. B-3 plasmid pA01 DNA, complete genome 44 0.51
9gb|M64604.1|BC1REP Plasmid pBC1 (from Bacillus coagulans) replic... 44 0.51
10ref|XM_419498.1| PREDICTED: Gallus gallus similar to MAD2L1 bind... 42 2.0
11emb|BX510338.6| Zebrafish DNA sequence from clone CH211-202F5 in... 42 2.0
12gb|AC007679.4| Homo sapiens BAC clone RP11-273D4 from 2, complet... 42 2.0
13emb|BX323557.8| Zebrafish DNA sequence from clone DKEYP-86B9 in ... 42 2.0
14emb|BX072549.4| Zebrafish DNA sequence from clone CH211-114A17 i... 42 2.0
15gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 2.0
16gb|BC109064.1| Homo sapiens Bardet-Biedl syndrome 1, mRNA (cDNA ... 40 8.0
17gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome... 40 8.0
18ref|NM_024649.4| Homo sapiens Bardet-Biedl syndrome 1 (BBS1), mRNA 40 8.0
19gb|AC124721.4| Mus musculus chromosome 10 clone RP23-387G19, com... 40 8.0
20gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome... 40 8.0
21gb|BC047642.1| Homo sapiens Bardet-Biedl syndrome 1, mRNA (cDNA ... 40 8.0
22emb|AL353593.33| Human DNA sequence from clone RP5-1139B12 on ch... 40 8.0
23emb|AL121911.15|HSDJ989D7 Human DNA sequence from clone RP5-989D... 40 8.0
24emb|AL022097.1|HS256G22 Human DNA sequence from clone RP1-256G22... 40 8.0
25emb|AJ314898.1|HSA314898 Homo sapiens partial OBSCN gene for obs... 40 8.0
26emb|BX647612.1|HSM807758 Homo sapiens mRNA; cDNA DKFZp313N0733 (... 40 8.0
27emb|CR858140.1| Pongo pygmaeus mRNA; cDNA DKFZp468B1612 (from cl... 40 8.0
28gb|AF503941.1| Homo sapiens Bardet-Biedl syndrome 1 (BBS1) mRNA,... 40 8.0
29dbj|AK095638.1| Homo sapiens cDNA FLJ38319 fis, clone FCBBF3024002 40 8.0
30dbj|AK027645.1| Homo sapiens cDNA FLJ14739 fis, clone NT2RP3002402 40 8.0
31dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 8.0
32gb|AC107385.4| Homo sapiens BAC clone RP11-158C21 from 4, comple... 40 8.0
33gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, comp... 40 8.0
34gb|U86889.1|MCU86889 Molluscum contagiosum virus subtype 1 clone... 40 8.0
35dbj|AK083601.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 40 8.0
36gb|AF157253.1|AF157253 Halteromyces radiatus translation elongat... 40 8.0
37gb|AF361104.2|AF361104 Homo sapiens fibrinogen alpha chain prepr... 40 8.0
38dbj|AB213171.1| Uncultured bacterium gene for 16S rRNA, partial ... 40 8.0
39gb|AC117080.2| Dictyostelium discoideum chromosome 2 map complem... 40 8.0
40gb|AC007297.23| Homo sapiens 12 BAC RP11-690J15 (Roswell Park Ca... 40 8.0
41gb|AC092037.2| Homo sapiens chromosome 3 clone RP11-89F17, compl... 40 8.0
42emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, ... 40 8.0
43dbj|AK027243.1| Homo sapiens cDNA: FLJ23590 fis, clone LNG14491 40 8.0
44dbj|AP002748.4| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 8.0
45dbj|AP001804.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.0
46dbj|AP000916.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.0
47gb|U36478.1|HSU36478 Human fibrinogen gamma chain/fibrinogen alp... 40 8.0
48gb|BC109065.1| Homo sapiens Bardet-Biedl syndrome 1, mRNA (cDNA ... 40 8.0
49emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chr... 40 8.0 
>ref|XM_550092.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2054

 Score =  117 bits (59), Expect = 4e-23
 Identities = 80/87 (91%)
 Strand = Plus / Minus

                                                                        
Query: 499  cgagatgatacctttcttccccacatggcgagcgctatgcggccgccgtcaagctctcct 558
            ||||| |||| |||||||||||||||||| |  |||||||||||||| ||||||||||||
Sbjct: 1441 cgagacgatatctttcttccccacatggcaaatgctatgcggccgccatcaagctctcct 1382

                                       
Query: 559  gcggggatgctattgatggcattgatc 585
            || ||||||||||||||||||||||||
Sbjct: 1381 gcagggatgctattgatggcattgatc 1355



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 111  ttttattttgctactgcaaggagcactggagc 142
            ||||||||||||||||||||||||| ||||||
Sbjct: 1845 ttttattttgctactgcaaggagcaatggagc 1814
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  117 bits (59), Expect = 4e-23
 Identities = 74/79 (93%)
 Strand = Plus / Plus

                                                                           
Query: 507     tacctttcttccccacatggcgagcgctatgcggccgccgtcaagctctcctgcggggat 566
               ||||||||||||||||||||| |  |||||||||||||| |||||||||||||| |||||
Sbjct: 2266041 tacctttcttccccacatggcaaatgctatgcggccgccatcaagctctcctgcagggat 2266100

                                  
Query: 567     gctattgatggcattgatc 585
               |||||||||||||||||||
Sbjct: 2266101 gctattgatggcattgatc 2266119



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                               
Query: 111     ttttattttgctactgcaaggagcactggagc 142
               ||||||||||||||||||||||||| ||||||
Sbjct: 2265490 ttttattttgctactgcaaggagcaatggagc 2265521
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>dbj|AP002483.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0019D06
          Length = 167405

 Score =  117 bits (59), Expect = 4e-23
 Identities = 74/79 (93%)
 Strand = Plus / Plus

                                                                         
Query: 507   tacctttcttccccacatggcgagcgctatgcggccgccgtcaagctctcctgcggggat 566
             ||||||||||||||||||||| |  |||||||||||||| |||||||||||||| |||||
Sbjct: 49625 tacctttcttccccacatggcaaatgctatgcggccgccatcaagctctcctgcagggat 49684

                                
Query: 567   gctattgatggcattgatc 585
             |||||||||||||||||||
Sbjct: 49685 gctattgatggcattgatc 49703



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 111   ttttattttgctactgcaaggagcactggagc 142
             ||||||||||||||||||||||||| ||||||
Sbjct: 49074 ttttattttgctactgcaaggagcaatggagc 49105
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>dbj|AK065031.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001G24, full
            insert sequence
          Length = 2054

 Score =  117 bits (59), Expect = 4e-23
 Identities = 80/87 (91%)
 Strand = Plus / Minus

                                                                        
Query: 499  cgagatgatacctttcttccccacatggcgagcgctatgcggccgccgtcaagctctcct 558
            ||||| |||| |||||||||||||||||| |  |||||||||||||| ||||||||||||
Sbjct: 1441 cgagacgatatctttcttccccacatggcaaatgctatgcggccgccatcaagctctcct 1382

                                       
Query: 559  gcggggatgctattgatggcattgatc 585
            || ||||||||||||||||||||||||
Sbjct: 1381 gcagggatgctattgatggcattgatc 1355



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 111  ttttattttgctactgcaaggagcactggagc 142
            ||||||||||||||||||||||||| ||||||
Sbjct: 1845 ttttattttgctactgcaaggagcaatggagc 1814
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>dbj|AK062266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-H11, full
           insert sequence
          Length = 1198

 Score =  117 bits (59), Expect = 4e-23
 Identities = 80/87 (91%)
 Strand = Plus / Minus

                                                                       
Query: 499 cgagatgatacctttcttccccacatggcgagcgctatgcggccgccgtcaagctctcct 558
           ||||| |||| |||||||||||||||||| |  |||||||||||||| ||||||||||||
Sbjct: 657 cgagacgatatctttcttccccacatggcaaatgctatgcggccgccatcaagctctcct 598

                                      
Query: 559 gcggggatgctattgatggcattgatc 585
           || ||||||||||||||||||||||||
Sbjct: 597 gcagggatgctattgatggcattgatc 571



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 111  ttttattttgctactgcaaggagcactggagc 142
            ||||||||||||||||||||||||| ||||||
Sbjct: 1061 ttttattttgctactgcaaggagcaatggagc 1030
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>gb|AE012519.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 427
            of 460 of the complete genome
          Length = 11384

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 523  atggcgagcgctatgcggccgcc 545
            |||||||||||||||||||||||
Sbjct: 7655 atggcgagcgctatgcggccgcc 7633
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 523     atggcgagcgctatgcggccgcc 545
               |||||||||||||||||||||||
Sbjct: 4800719 atggcgagcgctatgcggccgcc 4800697
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>dbj|AB040121.1| Bacillus sp. B-3 plasmid pA01 DNA, complete genome
          Length = 3325

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 98   aaaactcctgcttttttatttt 119
            ||||||||||||||||||||||
Sbjct: 2398 aaaactcctgcttttttatttt 2419
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>gb|M64604.1|BC1REP Plasmid pBC1 (from Bacillus coagulans) replicative protein (rep)
            gene, complete cds
          Length = 1615

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 98   aaaactcctgcttttttatttt 119
            ||||||||||||||||||||||
Sbjct: 1398 aaaactcctgcttttttatttt 1419
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>ref|XM_419498.1| PREDICTED: Gallus gallus similar to MAD2L1 binding protein (Caught by
            MAD2 protein) (LOC421448), mRNA
          Length = 1445

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 501  agatgatacctttcttcccca 521
            |||||||||||||||||||||
Sbjct: 1339 agatgatacctttcttcccca 1359
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>emb|BX510338.6| Zebrafish DNA sequence from clone CH211-202F5 in linkage group 5,
             complete sequence
          Length = 87819

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    acaagaaaaaactcctgcttt 111
             |||||||||||||||||||||
Sbjct: 19849 acaagaaaaaactcctgcttt 19869
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>gb|AC007679.4| Homo sapiens BAC clone RP11-273D4 from 2, complete sequence
          Length = 170033

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 155    caagctattcttatgatcaca 175
              |||||||||||||||||||||
Sbjct: 101068 caagctattcttatgatcaca 101048
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>emb|BX323557.8| Zebrafish DNA sequence from clone DKEYP-86B9 in linkage group 5,
             complete sequence
          Length = 223754

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   ttttttattttgctactgcaa 129
             |||||||||||||||||||||
Sbjct: 63767 ttttttattttgctactgcaa 63747
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>emb|BX072549.4| Zebrafish DNA sequence from clone CH211-114A17 in linkage group 5,
             complete sequence
          Length = 167182

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   ttttttattttgctactgcaa 129
             |||||||||||||||||||||
Sbjct: 99176 ttttttattttgctactgcaa 99156
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 346     aggccgatgtagctgttctcg 366
               |||||||||||||||||||||
Sbjct: 1514333 aggccgatgtagctgttctcg 1514313
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>gb|BC109064.1| Homo sapiens Bardet-Biedl syndrome 1, mRNA (cDNA clone MGC:126183
            IMAGE:40033833), complete cds
          Length = 1977

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcagaccagcagccccagga 328
            ||||||||||||||||||||
Sbjct: 1565 gcagaccagcagccccagga 1546
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>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence
          Length = 196946

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     ttgaacagtatgaacagttt 21
             ||||||||||||||||||||
Sbjct: 98394 ttgaacagtatgaacagttt 98375
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>ref|NM_024649.4| Homo sapiens Bardet-Biedl syndrome 1 (BBS1), mRNA
          Length = 3370

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcagaccagcagccccagga 328
            ||||||||||||||||||||
Sbjct: 1572 gcagaccagcagccccagga 1553
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>gb|AC124721.4| Mus musculus chromosome 10 clone RP23-387G19, complete sequence
          Length = 216612

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 195    aaacatctcacagatacagt 214
              ||||||||||||||||||||
Sbjct: 116766 aaacatctcacagatacagt 116747
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>gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome 6, complete sequence
          Length = 222535

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    tctatgaactggactacatt 52
             ||||||||||||||||||||
Sbjct: 74502 tctatgaactggactacatt 74483
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>gb|BC047642.1| Homo sapiens Bardet-Biedl syndrome 1, mRNA (cDNA clone MGC:51114
            IMAGE:4824649), complete cds
          Length = 3470

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcagaccagcagccccagga 328
            ||||||||||||||||||||
Sbjct: 1531 gcagaccagcagccccagga 1512
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>emb|AL353593.33| Human DNA sequence from clone RP5-1139B12 on chromosome 1q42.1-43
            Contains part of the OBSCN gene for obscurin cytoskeletal
            calmodulin and titin-interacting RhoGEF protein and four
            CpG islands, complete sequence
          Length = 135964

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 405  cctctgcaggaagaagatga 424
            ||||||||||||||||||||
Sbjct: 7623 cctctgcaggaagaagatga 7604
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>emb|AL121911.15|HSDJ989D7 Human DNA sequence from clone RP5-989D7 on chromosome 20 Contains part of
              a novel gene, complete sequence
          Length = 119790

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    cctgcttttttattttgcta 123
              ||||||||||||||||||||
Sbjct: 104834 cctgcttttttattttgcta 104853
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>emb|AL022097.1|HS256G22 Human DNA sequence from clone RP1-256G22 on chromosome 6p24.1-25.3
              Contains a heterogeneous nuclear ribonucleoprotein A0
              (HNRPA0) pseudogene and part of the gene for
              phenylalanine-tRNA synthetase (FARS1), complete sequence
          Length = 149140

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 309    gcagaccagcagccccaggaacaa 332
              |||| |||||||||||||||||||
Sbjct: 120336 gcagcccagcagccccaggaacaa 120313
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>emb|AJ314898.1|HSA314898 Homo sapiens partial OBSCN gene for obscurin, exons 5-11
          Length = 24545

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 405  cctctgcaggaagaagatga 424
            ||||||||||||||||||||
Sbjct: 6453 cctctgcaggaagaagatga 6434
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>emb|BX647612.1|HSM807758 Homo sapiens mRNA; cDNA DKFZp313N0733 (from clone DKFZp313N0733)
          Length = 3515

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcagaccagcagccccagga 328
            ||||||||||||||||||||
Sbjct: 1601 gcagaccagcagccccagga 1582
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>emb|CR858140.1| Pongo pygmaeus mRNA; cDNA DKFZp468B1612 (from clone DKFZp468B1612)
          Length = 3386

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcagaccagcagccccagga 328
            ||||||||||||||||||||
Sbjct: 1579 gcagaccagcagccccagga 1560
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>gb|AF503941.1| Homo sapiens Bardet-Biedl syndrome 1 (BBS1) mRNA, complete cds
          Length = 3370

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcagaccagcagccccagga 328
            ||||||||||||||||||||
Sbjct: 1572 gcagaccagcagccccagga 1553
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>dbj|AK095638.1| Homo sapiens cDNA FLJ38319 fis, clone FCBBF3024002
          Length = 3585

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcagaccagcagccccagga 328
            ||||||||||||||||||||
Sbjct: 1579 gcagaccagcagccccagga 1560
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>dbj|AK027645.1| Homo sapiens cDNA FLJ14739 fis, clone NT2RP3002402
          Length = 3626

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcagaccagcagccccagga 328
            ||||||||||||||||||||
Sbjct: 1827 gcagaccagcagccccagga 1808
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 384     ggagaggggagcgatcgggc 403
               ||||||||||||||||||||
Sbjct: 1570788 ggagaggggagcgatcgggc 1570769
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>gb|AC107385.4| Homo sapiens BAC clone RP11-158C21 from 4, complete sequence
          Length = 156442

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 315   cagcagccccaggaacaaaa 334
             ||||||||||||||||||||
Sbjct: 66976 cagcagccccaggaacaaaa 66995
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>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome
          Length = 190289

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    tgcaggaagaagatgagcac 428
              ||||||||||||||||||||
Sbjct: 180340 tgcaggaagaagatgagcac 180359
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>gb|U86889.1|MCU86889 Molluscum contagiosum virus subtype 1 clone H-K hypothetical protein
            (H-K.1) gene, partial cds, hypothetical protein (H-K.2)
            gene, complete cds, and hypothetical protein (H-K.3)
            gene, partial cds
          Length = 3947

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 409  tgcaggaagaagatgagcac 428
            ||||||||||||||||||||
Sbjct: 1186 tgcaggaagaagatgagcac 1205
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>dbj|AK083601.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030052P04
            product:unclassifiable, full insert sequence
          Length = 3178

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    ttgaacagtatgaacagttt 21
            ||||||||||||||||||||
Sbjct: 3087 ttgaacagtatgaacagttt 3106
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>gb|AF157253.1|AF157253 Halteromyces radiatus translation elongation factor 1-alpha
           (EF-1alpha) gene, partial cds
          Length = 1422

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 563 ggatgctattgatggcattgatcc 586
           |||||||||||||| |||||||||
Sbjct: 797 ggatgctattgatgccattgatcc 820
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>gb|AF361104.2|AF361104 Homo sapiens fibrinogen alpha chain preproprotein (FGA) gene,
            complete cds, alternatively spliced
          Length = 9947

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  cagcagccccaggaacaaaa 334
            ||||||||||||||||||||
Sbjct: 1731 cagcagccccaggaacaaaa 1712
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>dbj|AB213171.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:
           FnvB58
          Length = 837

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 377 tctcctcggagaggggagcg 396
           ||||||||||||||||||||
Sbjct: 455 tctcctcggagaggggagcg 474
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>gb|AC117080.2| Dictyostelium discoideum chromosome 2 map complement(821514-735598)
             strain AX4, complete sequence
          Length = 85916

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 96    aaaaaactcctgcttttttatttt 119
             |||||||||||| |||||||||||
Sbjct: 23675 aaaaaactcctgtttttttatttt 23652
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>gb|AC007297.23| Homo sapiens 12 BAC RP11-690J15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 187737

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   tgcttttttattttgctact 125
             ||||||||||||||||||||
Sbjct: 94961 tgcttttttattttgctact 94980
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>gb|AC092037.2| Homo sapiens chromosome 3 clone RP11-89F17, complete sequence
          Length = 168499

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 304   ggcaggcagaccagcagccccaggaacaaaat 335
             ||||||||||| ||||||| ||||||| ||||
Sbjct: 29974 ggcaggcagactagcagcctcaggaaccaaat 30005
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>emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, complete sequence
          Length = 168383

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   gcagccccaggaacaaaatg 336
             ||||||||||||||||||||
Sbjct: 64828 gcagccccaggaacaaaatg 64809
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>dbj|AK027243.1| Homo sapiens cDNA: FLJ23590 fis, clone LNG14491
          Length = 2072

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 309 gcagaccagcagccccagga 328
           ||||||||||||||||||||
Sbjct: 269 gcagaccagcagccccagga 250
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>dbj|AP002748.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-3074O7, complete
              sequence
          Length = 176017

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    gcagaccagcagccccagga 328
              ||||||||||||||||||||
Sbjct: 104142 gcagaccagcagccccagga 104123
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>dbj|AP001804.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-164A10, complete
              sequence
          Length = 166302

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    gaaactcttcagtcaaaagt 262
              ||||||||||||||||||||
Sbjct: 158739 gaaactcttcagtcaaaagt 158758
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>dbj|AP000916.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-728D14, complete
             sequence
          Length = 192926

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   gaaactcttcagtcaaaagt 262
             ||||||||||||||||||||
Sbjct: 47444 gaaactcttcagtcaaaagt 47463
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>gb|U36478.1|HSU36478 Human fibrinogen gamma chain/fibrinogen alpha chain genes, intergenic
             region
          Length = 13134

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   cagcagccccaggaacaaaa 334
             ||||||||||||||||||||
Sbjct: 12610 cagcagccccaggaacaaaa 12591
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>gb|BC109065.1| Homo sapiens Bardet-Biedl syndrome 1, mRNA (cDNA clone MGC:126184
            IMAGE:40033834), complete cds
          Length = 1795

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  gcagaccagcagccccagga 328
            ||||||||||||||||||||
Sbjct: 1178 gcagaccagcagccccagga 1159
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>emb|AL732513.8| Mouse DNA sequence from clone RP23-344B24 on chromosome 2, complete
             sequence
          Length = 209452

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   agcatcacaaggctccaagc 159
             ||||||||||||||||||||
Sbjct: 33568 agcatcacaaggctccaagc 33587


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,678,928
Number of Sequences: 3902068
Number of extensions: 5678928
Number of successful extensions: 113842
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113610
Number of HSP's gapped (non-prelim): 232
length of query: 586
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 563
effective length of database: 17,143,297,704
effective search space: 9651676607352
effective search space used: 9651676607352
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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