ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24i09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MAL1_APIME (Q17058) Alpha-glucosidase precursor (EC 3.2.1.20) (M... 30 4.5
2IL5_SIGHI (Q9ESI9) Interleukin-5 precursor (IL-5) (T-cell replac... 29 7.8

>MAL1_APIME (Q17058) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase)|
          Length = 567

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -3

Query: 496 NSFFGTAKEASSIHASPHMLVDNISLRTLNDIFKKFSASPQN 371
           NSFF   K+ +S+  SP+    N++ R LND    FS   ++
Sbjct: 457 NSFFNMFKKFASLKKSPYFKEANLNTRMLNDNVFAFSRETED 498



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>IL5_SIGHI (Q9ESI9) Interleukin-5 precursor (IL-5) (T-cell replacing factor)|
           (TRF) (Eosinophil differentiation factor)
          Length = 132

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 465 HLSMLVPICLWTTLVSVP*MTSLKSFLQALKT 370
           HLS+L   C+WT  V +P  T +K  L  L T
Sbjct: 6   HLSILTLACVWTFAVEIPMHTVVKETLIQLST 37


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,355,580
Number of Sequences: 219361
Number of extensions: 1445965
Number of successful extensions: 3136
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3136
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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