>TRI29_MOUSE (Q8R2Q0) Tripartite motif protein 29|
          Length = 587

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
 Frame = +2

Query: 47  HINSIYSIAGTFNKREQTRNSAARN*--MSPVDGNSKPQ*AH*LLVTSNGWQLSPMPGFQ 220
           + N++Y   G +  R     S  +N   M  V GNS              + L   P   
Sbjct: 501 NFNNLYGTKGNYTSRVWEYTSTVQNSEDMPTVQGNSS-------------FSLKGFPSL- 546

Query: 221 LRHECHHGLHRVWRTIMRKCLSYTYEFYWGKLEGIGSN 334
           LR +      + W++  +  LS+   FY  K  GIGSN
Sbjct: 547 LRSQVPKAQPQTWKSGKQTLLSHYRPFYVNKGSGIGSN 584

>TRI29_HUMAN (Q14134) Tripartite motif protein 29 (Ataxia-telangiectasia group|
           D-associated protein)
          Length = 588

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 23/96 (23%), Positives = 41/96 (42%)
 Frame = +2

Query: 47  HINSIYSIAGTFNKREQTRNSAARN*MSPVDGNSKPQ*AH*LLVTSNGWQLSPMPGFQLR 226
           + N++Y   G +  R    +S+ +N       N  P     ++  S+ + L   P   +R
Sbjct: 501 NFNNLYGTKGNYTSRVWEYSSSIQN-----SDNDLP-----VVQGSSSFSLKGYPSL-MR 549

Query: 227 HECHHGLHRVWRTIMRKCLSYTYEFYWGKLEGIGSN 334
            +      + W++  +  LS+   FY  K  GIGSN
Sbjct: 550 SQSPKAQPQTWKSGKQTMLSHYRPFYVNKGNGIGSN 585

>Y171_UREPA (Q9PQX2) Hypothetical protein UU171|
          Length = 199

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 308 GKLEGIGSNINSRLRSFGLQTNKV 379
           GKL G+ SNIN ++  F L  N++
Sbjct: 66  GKLNGLASNINYKISKFTLNNNEI 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,187,949
Number of Sequences: 219361
Number of extensions: 1184440
Number of successful extensions: 2513
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2512
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)