ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24i04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107734.1| Zea mays PCO065209 mRNA sequence 101 3e-18
2dbj|AK109510.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
3dbj|AK063486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 76 2e-10
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
6gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome... 76 2e-10
7ref|XM_506295.1| PREDICTED Oryza sativa (japonica cultivar-group... 62 3e-06
8ref|XM_477827.1| Oryza sativa (japonica cultivar-group), mRNA 62 3e-06
9dbj|AK100065.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 3e-06
10dbj|AK060412.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 3e-06
11dbj|AB017693.1| Nicotiana tabacum WERBP-1 mRNA, complete cds 54 6e-04
12gb|AC122168.14| Medicago truncatula clone mth2-4o4, complete seq... 50 0.010
13gb|DQ100348.1| Zea mays carotenoid cleavage dioxygenase 1 (CCD1)... 46 0.15
14dbj|AP006377.1| Lotus japonicus genomic DNA, chromosome 1, clone... 46 0.15
15ref|NM_111316.1| Arabidopsis thaliana transcription factor AT3G0... 42 2.3
16ref|XM_468375.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.3
17gb|AC022287.9|ATAC022287 Arabidopsis thaliana chromosome III BAC... 42 2.3
18gb|AC135461.11| Medicago truncatula clone mth2-34f24, complete s... 42 2.3
19gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete se... 42 2.3
20emb|BX548025.9| Zebrafish DNA sequence from clone DKEY-237J22 in... 42 2.3
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
22gb|BT005352.1| Arabidopsis thaliana At3g04445 mRNA, complete cds 42 2.3
23dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
24dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
25emb|BX247876.6| Zebrafish DNA sequence from clone CH211-271B14 i... 42 2.3
26dbj|AK118630.1| Arabidopsis thaliana At3g04450 mRNA for putative... 42 2.3
27gb|U67763.1|PBU67763 Plasmodium berghei thrombospondin related a... 42 2.3
28gb|AC103359.6| Mus musculus chromosome 8, clone RP24-365B9, comp... 42 2.3
29ref|XM_872523.1| PREDICTED: Bos taurus similar to Protein KIAA01... 40 9.2
30ref|XM_584765.2| PREDICTED: Bos taurus similar to Protein KIAA01... 40 9.2
31gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p... 40 9.2
32gb|AC110559.11| Mus musculus chromosome 7, clone RP23-253E12, co... 40 9.2
33gb|AY190956.1| Drosophila virilis clone DVIF01_06_H02 (D1438) ge... 40 9.2
34emb|AL591802.28| Human DNA sequence from clone RP11-330L22 on ch... 40 9.2
35ref|XM_504903.1| Yarrowia lipolytica CLIB122, YALI0F02387g predi... 40 9.2
36emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chr... 40 9.2
37gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 geno... 40 9.2
38emb|CR382400.1| Plasmodium falciparum chromosome 6, complete seq... 40 9.2
39emb|BX908782.7| Zebrafish DNA sequence from clone DKEY-6E4 in li... 40 9.2
40gb|AC126538.1| Homo sapiens chromosome 16 clone CTD-3225F13, com... 40 9.2
41gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 gen... 40 9.2
42gb|AC158315.9| Mus musculus chromosome 7, clone RP23-146D22, com... 40 9.2
43gb|AC008877.9| Homo sapiens chromosome 5 clone CTD-2204B21, comp... 40 9.2
44gb|AC034233.5| Homo sapiens chromosome 5 clone CTD-2251M10, comp... 40 9.2
45gb|AC016599.6| Homo sapiens chromosome 5 clone CTD-2054D19, comp... 40 9.2
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
47gb|AC133065.3| Homo sapiens chromosome 16 clone RP11-876N24, com... 40 9.2
48gb|AC010379.5|AC010379 Homo sapiens chromosome 5 clone CTD-2064M... 40 9.2
49emb|CR936503.1| Lactobacillus sakei strain 23K complete genome 40 9.2
50gb|AY105646.1| Zea mays PCO146542 mRNA sequence 40 9.2
51gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
52emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 9.2
53gb|AC133914.2| Homo sapiens chromosome 16 clone LA16c_345H8, com... 40 9.2 
>gb|AY107734.1| Zea mays PCO065209 mRNA sequence
          Length = 851

 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                       
Query: 588 ctgcttttcaaacatcatctgaagatacttcccttgttcttcaattcgcaactgcaactt 647
           ||||||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| ||
Sbjct: 469 ctgcttttcaaacatcatctgcagatactttccttgctcttcaatccgcaactgcaattt 410

                                      
Query: 648 tctctgggtctcaagttgttcatgaag 674
           || |||  ||||||| |||||||||||
Sbjct: 409 tcgctgaatctcaagctgttcatgaag 383
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>dbj|AK109510.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-D09, full
            insert sequence
          Length = 1750

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                        
Query: 580  gatttagactgcttttcaaacatcatctgaagatacttcccttgttcttcaattcgcaac 639
            |||||| | ||||||||||||||| |||| ||||| |||||||||||||||||||| | |
Sbjct: 1366 gatttacattgcttttcaaacatcttctgcagatatttcccttgttcttcaattcgaagc 1307

                                               
Query: 640  tgcaactttctctgggtctcaagttgttcatgaag 674
            ||||| || |||||  |||| ||||||||||||||
Sbjct: 1306 tgcaatttcctctgaatctcgagttgttcatgaag 1272
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>dbj|AK063486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-C05, full
            insert sequence
          Length = 2003

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 83/95 (87%)
 Strand = Plus / Minus

                                                                        
Query: 580  gatttagactgcttttcaaacatcatctgaagatacttcccttgttcttcaattcgcaac 639
            |||||| | ||||||||||||||| |||| ||||| |||||||||||||||||||| | |
Sbjct: 1388 gatttacattgcttttcaaacatcttctgcagatatttcccttgttcttcaattcgaagc 1329

                                               
Query: 640  tgcaactttctctgggtctcaagttgttcatgaag 674
            ||||| || |||||  |||| ||||||||||||||
Sbjct: 1328 tgcaatttcctctgaatctcgagttgttcatgaag 1294
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                            
Query: 580      gatttagactgcttttcaaacatcatctgaagatacttcccttgttcttcaattcgcaac 639
                |||||| | ||||||||||||||| |||| ||||| |||||||||||||||||||| | |
Sbjct: 12103765 gatttacattgcttttcaaacatcttctgcagatatttcccttgttcttcaattcgaagc 12103706

                              
Query: 640      tgcaactttctctg 653
                ||||| || |||||
Sbjct: 12103705 tgcaatttcctctg 12103692
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                            
Query: 580      gatttagactgcttttcaaacatcatctgaagatacttcccttgttcttcaattcgcaac 639
                |||||| | ||||||||||||||| |||| ||||| |||||||||||||||||||| | |
Sbjct: 12100528 gatttacattgcttttcaaacatcttctgcagatatttcccttgttcttcaattcgaagc 12100469

                              
Query: 640      tgcaactttctctg 653
                ||||| || |||||
Sbjct: 12100468 tgcaatttcctctg 12100455
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>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20,
              complete sequence
          Length = 144969

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 65/74 (87%)
 Strand = Plus / Minus

                                                                          
Query: 580    gatttagactgcttttcaaacatcatctgaagatacttcccttgttcttcaattcgcaac 639
              |||||| | ||||||||||||||| |||| ||||| |||||||||||||||||||| | |
Sbjct: 124345 gatttacattgcttttcaaacatcttctgcagatatttcccttgttcttcaattcgaagc 124286

                            
Query: 640    tgcaactttctctg 653
              ||||| || |||||
Sbjct: 124285 tgcaatttcctctg 124272
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>ref|XM_506295.1| PREDICTED Oryza sativa (japonica cultivar-group), P0443H10.4 mRNA
          Length = 1940

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                        
Query: 600  catcatctgaagatacttcccttgttcttcaattcgcaactgcaactttctctgggtctc 659
            ||||||||||||  |||||||||| || ||||||| || ||||||  |||| ||| ||||
Sbjct: 1311 catcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttggatctc 1252

                           
Query: 660  aagttgttcatgaag 674
            ||| |||||||||||
Sbjct: 1251 aagctgttcatgaag 1237
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>ref|XM_477827.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1873

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                        
Query: 600  catcatctgaagatacttcccttgttcttcaattcgcaactgcaactttctctgggtctc 659
            ||||||||||||  |||||||||| || ||||||| || ||||||  |||| ||| ||||
Sbjct: 1329 catcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttggatctc 1270

                           
Query: 660  aagttgttcatgaag 674
            ||| |||||||||||
Sbjct: 1269 aagctgttcatgaag 1255
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>dbj|AK100065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160O05, full
            insert sequence
          Length = 1941

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                        
Query: 600  catcatctgaagatacttcccttgttcttcaattcgcaactgcaactttctctgggtctc 659
            ||||||||||||  |||||||||| || ||||||| || ||||||  |||| ||| ||||
Sbjct: 1311 catcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttggatctc 1252

                           
Query: 660  aagttgttcatgaag 674
            ||| |||||||||||
Sbjct: 1251 aagctgttcatgaag 1237
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>dbj|AK060412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E04, full
            insert sequence
          Length = 1873

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                        
Query: 600  catcatctgaagatacttcccttgttcttcaattcgcaactgcaactttctctgggtctc 659
            ||||||||||||  |||||||||| || ||||||| || ||||||  |||| ||| ||||
Sbjct: 1329 catcatctgaaggcacttcccttgctcctcaattctcagctgcaaacttctttggatctc 1270

                           
Query: 660  aagttgttcatgaag 674
            ||| |||||||||||
Sbjct: 1269 aagctgttcatgaag 1255
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>dbj|AB017693.1| Nicotiana tabacum WERBP-1 mRNA, complete cds
          Length = 1120

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 589 tgcttttcaaacatcatctgaagatacttcccttgttcttcaattcgcaactgcaacttt 648
           |||||||||||||||  ||| |||||   |||||||||||| || |||| |||||  |||
Sbjct: 636 tgcttttcaaacatctcctggagatatcgcccttgttcttctatacgcagctgcagattt 577

                                  
Query: 649 ctctgggtctcaagttgttcatg 671
           || ||  ||||||||||||||||
Sbjct: 576 ctttgaatctcaagttgttcatg 554
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>gb|AC122168.14| Medicago truncatula clone mth2-4o4, complete sequence
          Length = 120886

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 589    tgcttttcaaacatcatctgaagatacttcccttgttcttcaattcgcaactg 641
              ||||| |||||||||||||| || ||| | ||||| ||||| |||||||||||
Sbjct: 100443 tgcttctcaaacatcatctggaggtacctgccttgctcttctattcgcaactg 100391
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>gb|DQ100348.1| Zea mays carotenoid cleavage dioxygenase 1 (CCD1) gene, partial cds
          Length = 6188

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 600  catcatctgaagatacttcccttgttc 626
            ||||||||||||| |||||||||||||
Sbjct: 2295 catcatctgaagacacttcccttgttc 2321
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>dbj|AP006377.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT38A19, TM0221,
             complete sequence
          Length = 110900

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 619   ccttgttcttcaattcgcaactg 641
             |||||||||||||||||||||||
Sbjct: 28962 ccttgttcttcaattcgcaactg 28984
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>ref|NM_111316.1| Arabidopsis thaliana transcription factor AT3G04450 mRNA, complete
            cds
          Length = 1317

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 595  tcaaacatcatctgaagatacttcccttgttcttcaattcgcaactgca 643
            |||| ||||||||||||||||   ||||||||||| ||| | |||||||
Sbjct: 1091 tcaatcatcatctgaagataccgaccttgttcttcgatttgtaactgca 1043
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>ref|XM_468375.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1224

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 622  tgttcttcaattcgcaactgcaactttctctgggtctcaagttgttcatgaag 674
            |||||||| | | ||| ||||| |||||| ||| ||||||||||||| |||||
Sbjct: 1058 tgttcttctacttgcagctgcagctttctttggatctcaagttgttcgtgaag 1006
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>gb|AC022287.9|ATAC022287 Arabidopsis thaliana chromosome III BAC T27C4 genomic sequence,
             complete sequence
          Length = 71616

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                              
Query: 595   tcaaacatcatctgaagatacttcccttgttcttcaattcgcaactgca 643
             |||| ||||||||||||||||   ||||||||||| ||| | |||||||
Sbjct: 30875 tcaatcatcatctgaagataccgaccttgttcttcgatttgtaactgca 30827
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>gb|AC135461.11| Medicago truncatula clone mth2-34f24, complete sequence
          Length = 132875

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 595   tcaaacatcatctgaagatacttcccttg 623
             |||||||||||||| |||| |||||||||
Sbjct: 28190 tcaaacatcatctgtagatgcttcccttg 28218
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>gb|AC137701.25| Medicago truncatula clone mth2-35h1, complete sequence
          Length = 151417

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 595    tcaaacatcatctgaagatacttcccttg 623
              |||||||||||||| |||| |||||||||
Sbjct: 136325 tcaaacatcatctgtagatgcttcccttg 136297
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>emb|BX548025.9| Zebrafish DNA sequence from clone DKEY-237J22 in linkage group 9,
             complete sequence
          Length = 134425

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 496   ctatttctgtttgcagaatgg 516
             |||||||||||||||||||||
Sbjct: 81823 ctatttctgtttgcagaatgg 81803
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 600      catcatctgaagatacttcccttgttcttcaattcgcaactgcaa 644
                ||||||||||||  |||||||||| || ||||||| || ||||||
Sbjct: 14705070 catcatctgaaggcacttcccttgctcctcaattctcagctgcaa 14705026
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>gb|BT005352.1| Arabidopsis thaliana At3g04445 mRNA, complete cds
          Length = 1209

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 595 tcaaacatcatctgaagatacttcccttgttcttcaattcgcaactgca 643
           |||| ||||||||||||||||   ||||||||||| ||| | |||||||
Sbjct: 983 tcaatcatcatctgaagataccgaccttgttcttcgatttgtaactgca 935
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>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0443H10
          Length = 144695

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 600   catcatctgaagatacttcccttgttcttcaattcgcaactgcaa 644
             ||||||||||||  |||||||||| || ||||||| || ||||||
Sbjct: 29837 catcatctgaaggcacttcccttgctcctcaattctcagctgcaa 29793
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>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0026I22
          Length = 143302

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 600   catcatctgaagatacttcccttgttcttcaattcgcaactgcaa 644
             ||||||||||||  |||||||||| || ||||||| || ||||||
Sbjct: 98068 catcatctgaaggcacttcccttgctcctcaattctcagctgcaa 98024
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>emb|BX247876.6| Zebrafish DNA sequence from clone CH211-271B14 in linkage group 5,
              complete sequence
          Length = 176246

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 261    tagtatgttgattgactgctgtgat 285
              |||||||||||||||||||| ||||
Sbjct: 176113 tagtatgttgattgactgctttgat 176089
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>dbj|AK118630.1| Arabidopsis thaliana At3g04450 mRNA for putative transfactor,
            complete cds, clone: RAFL19-89-P11
          Length = 1824

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 595  tcaaacatcatctgaagatacttcccttgttcttcaattcgcaactgca 643
            |||| ||||||||||||||||   ||||||||||| ||| | |||||||
Sbjct: 1519 tcaatcatcatctgaagataccgaccttgttcttcgatttgtaactgca 1471
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>gb|U67763.1|PBU67763 Plasmodium berghei thrombospondin related adhesion protein (PbTRAP)
            gene, complete cds
          Length = 1865

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 575  tattagatttagactgctttt 595
            |||||||||||||||||||||
Sbjct: 1626 tattagatttagactgctttt 1606
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>gb|AC103359.6| Mus musculus chromosome 8, clone RP24-365B9, complete sequence
          Length = 178620

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 42    ctgccacttgacacctcaaat 62
             |||||||||||||||||||||
Sbjct: 66693 ctgccacttgacacctcaaat 66713
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>ref|XM_872523.1| PREDICTED: Bos taurus similar to Protein KIAA0196, transcript variant
            4 (LOC508040), mRNA
          Length = 3457

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 560  cctgccccttctccgtatta 579
            ||||||||||||||||||||
Sbjct: 1962 cctgccccttctccgtatta 1981
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>ref|XM_584765.2| PREDICTED: Bos taurus similar to Protein KIAA0196, transcript variant
            1 (LOC508040), mRNA
          Length = 4012

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 560  cctgccccttctccgtatta 579
            ||||||||||||||||||||
Sbjct: 1962 cctgccccttctccgtatta 1981
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>gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p11.4, complete
             sequence
          Length = 218733

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   agataatttgatttattgct 151
             ||||||||||||||||||||
Sbjct: 19526 agataatttgatttattgct 19507
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>gb|AC110559.11| Mus musculus chromosome 7, clone RP23-253E12, complete sequence
          Length = 192856

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    ataatttgatttattgctag 153
              ||||||||||||||||||||
Sbjct: 143351 ataatttgatttattgctag 143332
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>gb|AY190956.1| Drosophila virilis clone DVIF01_06_H02 (D1438) genomic sequence
          Length = 46427

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 497   tatttctgtttgcagaatgg 516
             ||||||||||||||||||||
Sbjct: 40339 tatttctgtttgcagaatgg 40320
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>emb|AL591802.28| Human DNA sequence from clone RP11-330L22 on chromosome X, complete
            sequence
          Length = 56935

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  agataatttgatttattgct 151
            ||||||||||||||||||||
Sbjct: 5485 agataatttgatttattgct 5466
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>ref|XM_504903.1| Yarrowia lipolytica CLIB122, YALI0F02387g predicted mRNA
          Length = 5721

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 1    tgagctcaagacaaagacta 20
            ||||||||||||||||||||
Sbjct: 5400 tgagctcaagacaaagacta 5419
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>emb|AL354692.23| Human DNA sequence from clone RP11-361M4 on chromosome 9 Contains a
             novel pseudogene, complete sequence
          Length = 110443

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   actgcttttcaaacatcatc 606
             ||||||||||||||||||||
Sbjct: 26654 actgcttttcaaacatcatc 26673
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>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence,
            complete sequence
          Length = 64582

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  taatttgatttattgctagc 154
            ||||||||||||||||||||
Sbjct: 6728 taatttgatttattgctagc 6709
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>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5
          Length = 348034

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    gaagataatttgatttattg 149
              ||||||||||||||||||||
Sbjct: 317550 gaagataatttgatttattg 317531
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>emb|BX908782.7| Zebrafish DNA sequence from clone DKEY-6E4 in linkage group 2, complete
             sequence
          Length = 196309

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   tacttatttaccaattacca 122
             ||||||||||||||||||||
Sbjct: 47418 tacttatttaccaattacca 47437
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>gb|AC126538.1| Homo sapiens chromosome 16 clone CTD-3225F13, complete sequence
          Length = 188015

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 647    ttctctgggtctcaagttgttcat 670
              |||||||||||||||||| |||||
Sbjct: 159168 ttctctgggtctcaagttcttcat 159145
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>gb|AC018929.12| Oryza sativa chromosome 10 BAC OSJNBa0027L23 genomic sequence, complete
              sequence
          Length = 143961

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    taatttgatttattgctagc 154
              ||||||||||||||||||||
Sbjct: 143433 taatttgatttattgctagc 143414
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>gb|AC158315.9| Mus musculus chromosome 7, clone RP23-146D22, complete sequence
          Length = 212973

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    ataatttgatttattgctag 153
              ||||||||||||||||||||
Sbjct: 125777 ataatttgatttattgctag 125796
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>gb|AC008877.9| Homo sapiens chromosome 5 clone CTD-2204B21, complete sequence
          Length = 163575

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tctgccacttgacacctcaa 60
              ||||||||||||||||||||
Sbjct: 137457 tctgccacttgacacctcaa 137438
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>gb|AC034233.5| Homo sapiens chromosome 5 clone CTD-2251M10, complete sequence
          Length = 168963

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    tctgccacttgacacctcaa 60
             ||||||||||||||||||||
Sbjct: 88139 tctgccacttgacacctcaa 88120
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>gb|AC016599.6| Homo sapiens chromosome 5 clone CTD-2054D19, complete sequence
          Length = 173736

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    tctgccacttgacacctcaa 60
             ||||||||||||||||||||
Sbjct: 94510 tctgccacttgacacctcaa 94491
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 135      taatttgatttattgctagc 154
                ||||||||||||||||||||
Sbjct: 22491010 taatttgatttattgctagc 22490991
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>gb|AC133065.3| Homo sapiens chromosome 16 clone RP11-876N24, complete sequence
          Length = 142215

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 647   ttctctgggtctcaagttgttcat 670
             |||||||||||||||||| |||||
Sbjct: 73336 ttctctgggtctcaagttcttcat 73359
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>gb|AC010379.5|AC010379 Homo sapiens chromosome 5 clone CTD-2064M2, complete sequence
          Length = 90113

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    tctgccacttgacacctcaa 60
             ||||||||||||||||||||
Sbjct: 27644 tctgccacttgacacctcaa 27663
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>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 428     tttctcctatttcggcactcacag 451
               |||||| |||||||||||||||||
Sbjct: 1800158 tttctcttatttcggcactcacag 1800181
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>gb|AY105646.1| Zea mays PCO146542 mRNA sequence
          Length = 645

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 63/76 (82%), Gaps = 1/76 (1%)
 Strand = Plus / Minus

                                                                       
Query: 600 catcatctg-aagatacttcccttgttcttcaattcgcaactgcaactttctctgggtct 658
           ||||||||| |||| ||||||||||||| || ||||  | ||||||  |||| ||  |||
Sbjct: 301 catcatctggaagacacttcccttgttcctcgattcttagctgcaaacttctttgtatct 242

                           
Query: 659 caagttgttcatgaag 674
           |||| |||||||||||
Sbjct: 241 caagctgttcatgaag 226
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 135      taatttgatttattgctagc 154
                ||||||||||||||||||||
Sbjct: 22503478 taatttgatttattgctagc 22503459
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      tgagctcaagacaaagacta 20
              ||||||||||||||||||||
Sbjct: 364395 tgagctcaagacaaagacta 364376
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>gb|AC133914.2| Homo sapiens chromosome 16 clone LA16c_345H8, complete sequence
          Length = 35645

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 647   ttctctgggtctcaagttgttcat 670
             |||||||||||||||||| |||||
Sbjct: 25085 ttctctgggtctcaagttcttcat 25108


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,545,475
Number of Sequences: 3902068
Number of extensions: 5545475
Number of successful extensions: 100565
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 100317
Number of HSP's gapped (non-prelim): 249
length of query: 676
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 653
effective length of database: 17,143,297,704
effective search space: 11194573400712
effective search space used: 11194573400712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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