>GLTB_MAIZE (P23225) Ferredoxin-dependent glutamate synthase, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT)
          Length = 1616

 Score =  171 bits (434), Expect = 2e-42
 Identities = 85/95 (89%), Positives = 87/95 (91%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y+LDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGS KG  IL EWEAYLP
Sbjct: 1522 YILDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSEKGIAILREWEAYLP 1581

Query: 530  LFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 426
            LFWQLVPPSEEDSPEACAEFERVLA+Q T   SAK
Sbjct: 1582 LFWQLVPPSEEDSPEACAEFERVLAKQATTQLSAK 1616

>GLTB_SPIOL (Q43155) Ferredoxin-dependent glutamate synthase, chloroplast (EC|
            1.4.7.1) (Fd-GOGAT)
          Length = 1517

 Score =  140 bits (354), Expect = 3e-33
 Identities = 68/94 (72%), Positives = 81/94 (86%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y+LDEDDTL+PKVNKEIVK+QRV AP GQMQLK LIEA+VEKTGS+KGA IL +W+ YLP
Sbjct: 1425 YILDEDDTLIPKVNKEIVKIQRVTAPVGQMQLKNLIEAHVEKTGSSKGASILKDWDKYLP 1484

Query: 530  LFWQLVPPSEEDSPEACAEFERVLARQKTAVQSA 429
            LFWQLVPPSEED+PEA A FE+ +  +  ++QSA
Sbjct: 1485 LFWQLVPPSEEDTPEASAMFEQ-MTSEGASLQSA 1517

>GLTB1_ARATH (Q9ZNZ7) Ferredoxin-dependent glutamate synthase 1, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 1)
          Length = 1648

 Score =  137 bits (345), Expect = 3e-32
 Identities = 64/89 (71%), Positives = 77/89 (86%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y+LDEDDTL+PK+N+EIVK+QRV APAG++QLK LIEA+VEKTGS+KGA IL+EWE YLP
Sbjct: 1556 YLLDEDDTLLPKINREIVKIQRVTAPAGELQLKSLIEAHVEKTGSSKGATILNEWEKYLP 1615

Query: 530  LFWQLVPPSEEDSPEACAEFERVLARQKT 444
            LFWQLVPPSEED+PEA A + R    + T
Sbjct: 1616 LFWQLVPPSEEDTPEASAAYVRTSTGEVT 1644

>GLTB2_ARATH (Q9T0P4) Ferredoxin-dependent glutamate synthase 2, chloroplast|
            precursor (EC 1.4.7.1) (Fd-GOGAT 2)
          Length = 1629

 Score =  121 bits (304), Expect = 2e-27
 Identities = 55/76 (72%), Positives = 68/76 (89%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y+LDED+TL+PK+NKEIVK+QRV +P GQ QLK LI+A+VEKTGS+KGA I+ EW+ YL 
Sbjct: 1531 YILDEDNTLLPKMNKEIVKIQRVTSPVGQTQLKSLIQAHVEKTGSSKGAMIVEEWDKYLA 1590

Query: 530  LFWQLVPPSEEDSPEA 483
            +FWQLVPPSEED+PEA
Sbjct: 1591 MFWQLVPPSEEDTPEA 1606

>GLTS_SYNY3 (P55038) Ferredoxin-dependent glutamate synthase 2 (EC 1.4.7.1)|
            (FD-GOGAT)
          Length = 1556

 Score = 90.5 bits (223), Expect = 5e-18
 Identities = 44/76 (57%), Positives = 52/76 (68%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y LDE   L  K+N EI+ +QR+ A  G+ QLK LI A+VE TGS KG  IL+ W  YL 
Sbjct: 1466 YFLDEVGDLPEKINPEIITLQRITASKGEEQLKSLITAHVEHTGSPKGKAILANWSDYLG 1525

Query: 530  LFWQLVPPSEEDSPEA 483
             FWQ VPPSE+DSPEA
Sbjct: 1526 KFWQAVPPSEKDSPEA 1541

>GLTB_PORPU (P51375) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1538

 Score = 86.3 bits (212), Expect = 9e-17
 Identities = 41/75 (54%), Positives = 50/75 (66%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y LDE++  + +VN EIVK+QRV   AG+ QLK LIE +  KTGS K   IL  W  YLP
Sbjct: 1451 YFLDEENKFIERVNSEIVKVQRVITKAGEQQLKNLIENHSAKTGSLKAHNILENWNTYLP 1510

Query: 530  LFWQLVPPSEEDSPE 486
             FWQ+VPPSE +  E
Sbjct: 1511 QFWQVVPPSEANIEE 1525

>GLTB_CYACA (O19906) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1549

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 37/75 (49%), Positives = 48/75 (64%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y LDE   L  KVN +IV++QRV     + QL  LIE +V KTGS K   IL +WE ++ 
Sbjct: 1463 YFLDEYSNLPEKVNLDIVRIQRVVTNEARKQLIQLIEKHVLKTGSKKAVLILQQWEIFIH 1522

Query: 530  LFWQLVPPSEEDSPE 486
             FWQ+VPPSE ++ E
Sbjct: 1523 YFWQIVPPSESETSE 1537

>GLTB_ANTSP (Q06434) Ferredoxin-dependent glutamate synthase (EC 1.4.7.1)|
            (Fd-GOGAT)
          Length = 1536

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 36/71 (50%), Positives = 45/71 (63%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y LDED+TL  K+N EIVK QR+     + QLK ++E Y  KT S K   IL  W  YL 
Sbjct: 1451 YFLDEDNTLKNKLNTEIVKAQRLLTKESEEQLKNIMELYEIKTKSEKAKLILDNWSQYLA 1510

Query: 530  LFWQLVPPSEE 498
             F+Q+VPPSE+
Sbjct: 1511 KFYQIVPPSEQ 1521

>GLTB_AZOBR (Q05755) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1515

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y+ D DD+L   +N E V  QR+     + QLK LIE +V +T S   A+IL++W   + 
Sbjct: 1429 YVYDLDDSLPLYINDESVIFQRIEVGHYESQLKHLIEEHVTETQSRFAAEILNDWAREVT 1488

Query: 530  LFWQLVP 510
             FWQ+VP
Sbjct: 1489 KFWQVVP 1495

>GLTB_ECOLI (P09831) Glutamate synthase [NADPH] large chain precursor (EC|
            1.4.1.13) (Glutamate synthase alpha subunit)
            (NADPH-GOGAT) (GLTS alpha chain)
          Length = 1517

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPA-GQMQLKGLIEAYVEKTGSTKGAKILSEWEAYL 534
            Y+LDE      +VN E+V++  V+A A  +  L+GLI  +V+ TGS +G +IL+ W  + 
Sbjct: 1426 YVLDESGDFRKRVNPELVEVLSVDALAIHEEHLRGLITEHVQHTGSQRGEEILANWSTFA 1485

Query: 533  PLFWQLVPPSEEDSPEACAEFERVLARQKTAVQ 435
              F  LV P   D         R  A  +   Q
Sbjct: 1486 TKF-ALVKPKSSDVKALLGHRSRSAAELRVQAQ 1517

>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 2111

 Score = 38.5 bits (88), Expect = 0.020
 Identities = 27/95 (28%), Positives = 45/95 (47%)
 Frame = -1

Query: 710  YMLDEDDTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYLP 531
            Y+ D       K+N E+V +  V   A    L+GLI+ +   TGS    +ILS++  +L 
Sbjct: 1485 YVYDMQMDFAGKINTEMVDISSVTDAAEIAFLRGLIQDHRHYTGSQVADRILSDFPRHLS 1544

Query: 530  LFWQLVPPSEEDSPEACAEFERVLARQKTAVQSAK 426
             F +++P           E++ VL R+    + AK
Sbjct: 1545 RFVKVLP----------REYKAVLEREAAKKEEAK 1569

>GLTA_BACSU (P39812) Glutamate synthase [NADPH] large chain (EC 1.4.1.13)|
            (NADPH-GOGAT)
          Length = 1520

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = -1

Query: 710  YMLDED-DTLVPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEKTGSTKGAKILSEWEAYL 534
            Y+L ED      K N E++  + +       Q+K ++E +   T S K   +L +WE  +
Sbjct: 1404 YVLTEDVKRFKRKCNLEMILFESLEDEKEIQQIKAMLERHTAYTNSQKAEDLLDQWEDSV 1463

Query: 533  PLFWQLVP 510
              F +++P
Sbjct: 1464 KKFVKVIP 1471

>DMXL1_MOUSE (Q6PNC0) Protein DmX-like 1 (X-like 1 protein)|
          Length = 3013

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -2

Query: 532  HSSGSWCHPAKKTLLKLVLSLREYLPGKKQLYNLLSDTSQS 410
            +SS S  HP KKTL + + SL + + GKK +++   D   S
Sbjct: 1267 NSSSSGLHPPKKTLTRSMTSLAQKICGKKSIFDPSVDMEDS 1307

>POTE1_MOUSE (Q91WC1) Protection of telomeres 1 (mPot1) (POT1-like telomere|
           end-binding protein)
          Length = 640

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 189 IYRGGCLGCKTLQKNPRRNLQARFQKMPWT 278
           ++  GC  C +L+  P +NL +RF K PWT
Sbjct: 504 VHHYGCKQCSSLK--PIQNLNSRFHKGPWT 531

>ACN9_RAT (Q6TUF2) ACN9 protein homolog, mitochondrial precursor (Liver|
           regeneration-related protein LRRGT00092)
          Length = 125

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
 Frame = -1

Query: 683 VPKVNKEIVKMQRVNAPAGQMQLKGLIEAYVEK-------TGSTKGAKILSEWEAYLPLF 525
           V  + + I+++ R   P     LK L + YV+         G  +  + L EWE Y  + 
Sbjct: 9   VRSLYRRILQLHRALPP----DLKALGDQYVKDEFRRHKTVGPGEAQRFLKEWETYAAVL 64

Query: 524 WQLVPPSEEDSP-EAC 480
           WQ    S + S  +AC
Sbjct: 65  WQQAKDSRQSSSGKAC 80

>APC2_YEAST (Q12440) Anaphase-promoting complex subunit 2|
          Length = 853

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +3

Query: 492 RVFFAGWHQLPEEWQICLPLAQ----NFSTFRAARFFNIGLNQALELHLPSWSINSLHLD 659
           R+F   ++ L E+W  CL L +     F+    + +   G+   LE   P+   +  +L+
Sbjct: 516 RLFTLKFYTLDEKWTRCLKLIREKIVKFTETSHSNYITNGILGLLETTAPAADADQSNLN 575

Query: 660 NLLVNLWD 683
           ++ V LWD
Sbjct: 576 SIDVMLWD 583


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,083,828
Number of Sequences: 219361
Number of extensions: 2024522
Number of successful extensions: 5535
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5534
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7196276819
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)