ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal24g20 |
|---|---|
| Clone Library Name | barley_pub |
>ARLY_HALMA (Q5UZ47) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 499 Score = 35.8 bits (81), Expect = 0.074 Identities = 17/36 (47%), Positives = 22/36 (61%) Frame = +3 Query: 393 GHPAGADGADLEEAVDGAVEQRVAEVDGDVHLARPR 500 GH A DG D+ EA++ AV +RV G +H AR R Sbjct: 83 GHDALPDGEDVHEAIESAVIERVGPDGGKMHTARSR 118
>NCPR_PHAAU (P37116) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 690 Score = 35.4 bits (80), Expect = 0.096 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 11/106 (10%) Frame = +1 Query: 166 LLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYTPATAPQY-----------APS 312 L+ + AE P A PP+ FF + PR YS+ + +P APQ P+ Sbjct: 440 LVEVMAEF--PSAKPPLGVFFAAIAPRLQPRYYSISS-SPRFAPQRVHVTCALVYGPTPT 496 Query: 313 LHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTVRL 450 I VCS+ W ++ S + +API +PS +L Sbjct: 497 GRIHKGVCST--------WMKNAIPSEKSQDCSSAPIFIRPSNFKL 534
>LDB3_HUMAN (O75112) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) Length = 727 Score = 35.0 bits (79), Expect = 0.13 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 5/96 (5%) Frame = +1 Query: 163 PLLSLAAEIRAPLAMP-PINAFFQS----YCPRTLSTPYSMPTYTPATAPQYAPSLHIFF 327 P + A IR + P P + + S Y P T TP P YTP+ AP Y PS + Sbjct: 395 PRVVTTASIRPSVYQPVPASTYSPSPGANYSP-TPYTPSPAPAYTPSPAPAYTPSPVPTY 453 Query: 328 SVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKP 435 + + + P + A S A P P R P Sbjct: 454 TPSPAPAYTPSPAPNYNPAPSVAYSGGPAEPASRPP 489
>ARLY_PROMM (Q7TV86) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 470 Score = 35.0 bits (79), Expect = 0.13 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 2/113 (1%) Frame = +3 Query: 78 VARLGEVVDELDGGRDGASGDGVLGDLVPFVVARGRDQGAACDASNQRVFPVILSADPFH 257 +A LG V +L GR + D V DL ++ R D D +R +L+ H Sbjct: 101 IALLGPVGKKLHTGR--SRNDQVGTDLRLWLRRRLDD----LDCELERFQHALLTQAESH 154 Query: 258 --SILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLEAVEGVLGGHPAGA 410 +++ Y H + P+C LAH L +E+ RD L+ V G + P GA Sbjct: 155 RQTLIPGYTHLQRAQPLC--LAHHLLAYIEMIQRDRDRLKDVRGRVNISPLGA 205
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 34.3 bits (77), Expect = 0.21 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 5/96 (5%) Frame = +1 Query: 163 PLLSLAAEIRAPLAMP-PINAFFQS----YCPRTLSTPYSMPTYTPATAPQYAPSLHIFF 327 P + A IR + P P +++ S Y P T TP P YTP+ AP Y PS + Sbjct: 391 PRVVTTASIRPSVYQPVPASSYSPSPGANYSP-TPYTPSPAPAYTPSPAPTYTPSPAPTY 449 Query: 328 SVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKP 435 S + + P + SAA P+ R P Sbjct: 450 SPSPAPAYTPSPAPNYTPTPSAAYSGGPSESASRPP 485
>ARLY_SYNPX (Q7TTY1) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 471 Score = 32.3 bits (72), Expect = 0.81 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 2/113 (1%) Frame = +3 Query: 78 VARLGEVVDELDGGRDGASGDGVLGDLVPFVVARGRDQGAACDASNQRVFPVILSADPFH 257 +A +G V +L GR S + +G + + R D+ D QR+ +L H Sbjct: 101 IALVGSVGKKLHTGR---SRNDQVGTDLRLWLRRRLDE---IDGDLQRLQRALLDQADRH 154 Query: 258 --SILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLEAVEGVLGGHPAGA 410 +++ Y H + P+C LAH L +E+ RD L V G + P GA Sbjct: 155 QSTMIPGYTHLQRAQPLC--LAHHLLAYIEMLQRDRQRLGDVRGRVNICPLGA 205
>MORC2_HUMAN (Q9Y6X9) MORC family CW-type zinc finger 2 (Zinc finger CW-type| coiled-coil domain protein 1) Length = 970 Score = 30.8 bits (68), Expect = 2.4 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 1/102 (0%) Frame = +1 Query: 208 PPINAFFQSYCPRTLSTPYSMPTYTPATAPQYAPSLHIFFSVCSSLRFETLP-LWRQSKA 384 PP+ A ++ S P S+PT PA+ P+ AP V SS LP L + +A Sbjct: 554 PPLPAVIRN----APSRPPSLPTPRPASQPRKAP-------VISST--PKLPALAAREEA 600 Query: 385 SSAATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLLDPAXSP 510 S++ LQ P AP RKP+ + + R + L P+ P Sbjct: 601 STSRLLQPPEAP--RKPANTLVKTA-SRPAPLVQQLSPSLLP 639
>EF1D1_ARATH (P48006) Elongation factor 1-delta 1 (EF-1-delta 1) (Elongation| factor 1B-beta 1) (eEF-1B beta 1) Length = 231 Score = 30.4 bits (67), Expect = 3.1 Identities = 14/35 (40%), Positives = 24/35 (68%) Frame = -1 Query: 347 RKLEQTLKKMCKEGAYWGAVAGVYVGMEYGVERVR 243 +KLE+ +K + EG +WGA V VG YG+++++ Sbjct: 159 KKLEEAVKSIQMEGLFWGASKLVPVG--YGIKKLQ 191
>DCP1A_MOUSE (Q91YD3) mRNA decapping enzyme 1A (EC 3.-.-.-) (Transcription| factor SMIF) (MAD homolog 4-interacting transcription coactivator 1) (Smad4-interacting transcriptional co-activator) Length = 602 Score = 30.4 bits (67), Expect = 3.1 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 5/112 (4%) Frame = +1 Query: 172 SLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYTPATAPQYAPSLHIFFS---VCSS 342 +++A + + P + + Q+ P S P +P+ P P+ S + S Sbjct: 466 AVSASLSNMVLAPTLQSMQQNQDPEVFSQPKVLPSAIPIAGSPLVPATTTAVSSVLLSPS 525 Query: 343 LRFETLPLWR--QSKASSAATLQAPTAPILRKPSTVRLSSGLPRSMAMSTLL 492 + +T+P + KASS + L TA RKPS + L +S TL+ Sbjct: 526 VFQQTVPRAADLERKASSPSPLTVGTAESQRKPSII-----LSKSQLQDTLI 572
>RIMK_XANOR (Q5H3K7) Ribosomal protein S6 modification protein| Length = 295 Score = 30.4 bits (67), Expect = 3.1 Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 5/119 (4%) Frame = +3 Query: 96 VVDELDGGRDGAS-GDGVLGDLVPFVVARGRDQGAACD-ASNQRVFPVILSADPFHSILH 269 +V E G +GA V+GD V VA R Q A D SN + + AD Sbjct: 175 IVQEFIGEAEGADLRCFVVGDRV---VAAMRRQAAEGDFRSNLHLGGTAVVADATELERE 231 Query: 270 AYIHSSNSTPICALLAHFLQCL---LELALRDTPTLEAVEGVLGGHPAGADGADLEEAV 437 + S+ + + ++ L L + TP LE VEGV G AGA LE++V Sbjct: 232 VAVRSARALGLAVAGVDLIRSKRGPLVLEVNSTPGLEGVEGVCGVDVAGAIVQHLEQSV 290
>ARLY_THET2 (Q72GZ4) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 462 Score = 30.0 bits (66), Expect = 4.0 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = +3 Query: 246 DPFHSILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLEAVEGVLGGHPAGA 410 DP + +L Y H + P+ LLAH+ E+ RD LE + L P GA Sbjct: 149 DPLY-VLPGYTHLQRAQPV--LLAHWFLAYYEMLKRDAGRLEDAKERLNESPLGA 200
>BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 768 Score = 30.0 bits (66), Expect = 4.0 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 15/59 (25%) Frame = +1 Query: 334 CSSLRFETLP----LWRQSKASSAATLQAPTAP-----------ILRKPSTVRLSSGLP 465 CSSL L L RQS AS + +P P ++ KPSTV+LSSG+P Sbjct: 352 CSSLPSGRLQVDVTLRRQSNASDDSLSLSPGTPPSLLNNSTHRQMMSKPSTVKLSSGIP 410
>YOPE_YEREN (P31492) Outer membrane virulence protein yopE| Length = 219 Score = 30.0 bits (66), Expect = 4.0 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Frame = +1 Query: 235 YCPRTLSTPYSMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKAS-SAATLQ 405 + R S P TPA P PS F L ETLP + Q +S A TLQ Sbjct: 73 FIQRMFSEGSHKPVVTPALTPAQMPSPTSFSDSIKQLAAETLPKYMQQLSSLDAETLQ 130
>TBX3_MOUSE (P70324) T-box transcription factor TBX3 (T-box protein 3)| Length = 741 Score = 29.6 bits (65), Expect = 5.3 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 5/135 (3%) Frame = +1 Query: 100 LMNSTAVAMAP-----PVMASWAILFPLLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPY 264 ++ S +AM+P P ++ S AA + P +N S PR +PY Sbjct: 584 VLASQGLAMSPFGSLFPYPYTYMAAAAAASTAAASSSVHRHPFLN--LNSMRPRLRYSPY 641 Query: 265 SMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPILRKPSTV 444 S+P P + SSL LP S AS+A L A + P++V Sbjct: 642 SIPVPVPDS---------------SSLLATALP----SMASAAGPLDGKAAALAASPASV 682 Query: 445 RLSSGLPRSMAMSTL 489 + SG + STL Sbjct: 683 AVDSGSELNSRSSTL 697
>KDSA_ERWCT (Q6D547) 2-dehydro-3-deoxyphosphooctonate aldolase (EC 2.5.1.55)| (Phospho-2-dehydro-3-deoxyoctonate aldolase) (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase) (KDO-8-phosphate synthetase) (KDO 8-P synthase) (KDOPS) Length = 284 Score = 29.6 bits (65), Expect = 5.3 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +3 Query: 141 GVLGDLVPFVVARGRDQGAACD-ASNQRVFPVILSADPFHSILHAYIHSSNSTPICALLA 317 G +G++V + G DQ CD SN +++ F+ + HA SN +P+ + Sbjct: 146 GQMGNIVDKFIEGGNDQIILCDRGSNFGYDNLVVDMLGFNVMKHA----SNGSPVIFDVT 201 Query: 318 HFLQC 332 H LQC Sbjct: 202 HALQC 206
>NCPR_CATRO (Q05001) NADPH--cytochrome P450 reductase (EC 1.6.2.4) (CPR)| (P450R) Length = 714 Score = 29.6 bits (65), Expect = 5.3 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 11/78 (14%) Frame = +1 Query: 166 LLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPTYTPATAP-----------QYAPS 312 LL + AE P A PP+ FF + PR YS+ + +P AP + P Sbjct: 464 LLEVMAEF--PSAKPPLGVFFAAIAPRLQPRFYSISS-SPRMAPSRIHVTCALVYEKTPG 520 Query: 313 LHIFFSVCSSLRFETLPL 366 I VCS+ +PL Sbjct: 521 GRIHKGVCSTWMKNAIPL 538
>LIVH_SALTY (P0A2J1) High-affinity branched-chain amino acid transport system| permease protein livH (LIV-I protein H) Length = 308 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -1 Query: 431 FLKIGAVG-ACRVAAEDAFDCLQSGSVSKRKLEQTLKKMCKEGAYWGAVAGVYVGMEYGV 255 F++ +G ACR AED L+ S+ ++ + GA AVAGV +G YGV Sbjct: 174 FIRYSRMGRACRACAED----LKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGV 229
>LIVH_SALTI (P0A2J2) High-affinity branched-chain amino acid transport system| permease protein livH (LIV-I protein H) Length = 308 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -1 Query: 431 FLKIGAVG-ACRVAAEDAFDCLQSGSVSKRKLEQTLKKMCKEGAYWGAVAGVYVGMEYGV 255 F++ +G ACR AED L+ S+ ++ + GA AVAGV +G YGV Sbjct: 174 FIRYSRMGRACRACAED----LKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGV 229
>LIVH_ECOLI (P0AEX7) High-affinity branched-chain amino acid transport system| permease protein livH (LIV-I protein H) Length = 308 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -1 Query: 431 FLKIGAVG-ACRVAAEDAFDCLQSGSVSKRKLEQTLKKMCKEGAYWGAVAGVYVGMEYGV 255 F++ +G ACR AED L+ S+ ++ + GA AVAGV +G YGV Sbjct: 174 FIRYSRMGRACRACAED----LKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGV 229
>LIVH_ECO57 (P0AEX8) High-affinity branched-chain amino acid transport system| permease protein livH (LIV-I protein H) Length = 308 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -1 Query: 431 FLKIGAVG-ACRVAAEDAFDCLQSGSVSKRKLEQTLKKMCKEGAYWGAVAGVYVGMEYGV 255 F++ +G ACR AED L+ S+ ++ + GA AVAGV +G YGV Sbjct: 174 FIRYSRMGRACRACAED----LKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGV 229
>TBX3_RAT (Q7TST9) T-box transcription factor TBX3 (T-box protein 3)| Length = 743 Score = 29.3 bits (64), Expect = 6.9 Identities = 25/83 (30%), Positives = 35/83 (42%) Frame = +1 Query: 241 PRTLSTPYSMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAP 420 PR +PYS+P P + SSL LP S AS+A L +A Sbjct: 636 PRLRYSPYSIPVPVPDS---------------SSLLATALP----SMASAAGPLDGKSAV 676 Query: 421 ILRKPSTVRLSSGLPRSMAMSTL 489 + P++V + SG + STL Sbjct: 677 LAASPASVAVDSGSELNSRSSTL 699
>CNKR1_HUMAN (Q969H4) Connector enhancer of kinase suppressor of ras 1| (Connector enhancer of KSR1) (hCNK1) (Connector enhancer of KSR-like) (CNK homolog protein 1) Length = 720 Score = 29.3 bits (64), Expect = 6.9 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = +1 Query: 241 PRTLSTPYSM-PTYTPATAPQYAPSLHIF-FSVCSSLRFETLPLWRQSKASSAATLQAPT 414 P+ L +P+ P+ + A APS +F F + S+ P W S + L P Sbjct: 295 PQVLDSPHQRSPSLSLAPLSPRAPSEDVFAFDLSSNPSPGPSPAWTDSASLGPEPLPIPP 354 Query: 415 APILRKPSTVRLSSGLPRS 471 P P+ V + GLP S Sbjct: 355 EPPAILPAGVAGTPGLPES 373
>SOCS6_HUMAN (O14544) Suppressor of cytokine signaling 6 (SOCS-6) (Suppressor of| cytokine signaling 4) (SOCS-4) (Cytokine-inducible SH2 protein 4) (CIS-4) Length = 535 Score = 29.3 bits (64), Expect = 6.9 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -1 Query: 416 AVGACRVAAEDAFDCLQS-GSVSKRKLEQTLKKMCKEGAYWGAV 288 A G RV +D +QS G + L + LKK+ K+G YWG + Sbjct: 351 APGVARV-----YDSVQSSGPMVVTSLTEELKKLAKQGWYWGPI 389
>SOCS6_MOUSE (Q9JLY0) Suppressor of cytokine signaling 6 (SOCS-6) (Suppressor of| cytokine signaling 4) (SOCS-4) (Cytokine-inducible SH2 protein 4) (CIS-4) Length = 533 Score = 29.3 bits (64), Expect = 6.9 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -1 Query: 416 AVGACRVAAEDAFDCLQS-GSVSKRKLEQTLKKMCKEGAYWGAV 288 A G RV +D +QS G + L + LKK+ K+G YWG + Sbjct: 349 APGVARV-----YDSVQSSGPMVVTSLTEELKKLAKQGWYWGPI 387
>EF1D2_ARATH (Q9SI20) Elongation factor 1-delta 2 (EF-1-delta 2) (Elongation| factor 1B-beta 2) (eEF-1B beta 2) Length = 231 Score = 28.9 bits (63), Expect = 9.0 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = -1 Query: 347 RKLEQTLKKMCKEGAYWGAVAGVYVGMEYGVERV 246 +KLE+ ++ + EG +WGA V VG YG++++ Sbjct: 159 KKLEEAVRSIQMEGLFWGASKLVPVG--YGIKKL 190
>ZO3_CANFA (O62683) Tight junction protein ZO-3 (Zonula occludens 3 protein)| (Zona occludens 3 protein) (Tight junction protein 3) Length = 898 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +3 Query: 108 LDGGRDGASGDGVLGDLVPFVVARGRDQ 191 + GGRD ASG V+ D+VP A GR Q Sbjct: 26 ISGGRDRASGSVVVSDVVPGGPADGRLQ 53
>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic| cytomatrix protein) Length = 5085 Score = 28.9 bits (63), Expect = 9.0 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 1/81 (1%) Frame = +1 Query: 250 LSTP-YSMPTYTPATAPQYAPSLHIFFSVCSSLRFETLPLWRQSKASSAATLQAPTAPIL 426 +STP YS TP PQY V S LR ++ +T T P Sbjct: 3003 ISTPQYSTARLTPPPGPQYG--------VGSVLRSSNGVVYSSVATPIPSTFAITTQPGS 3054 Query: 427 RKPSTVRLSSGLPRSMAMSTL 489 +TVR SG+P + AM++L Sbjct: 3055 IFSTTVRDLSGIPTTDAMTSL 3075
>ACCD_MYCTU (P63405) Putative acetyl-coenzyme A carboxylase carboxyl| transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) Length = 495 Score = 28.9 bits (63), Expect = 9.0 Identities = 35/131 (26%), Positives = 52/131 (39%) Frame = +3 Query: 12 GFSQQVLIQSCLI*KGNTALSTVARLGEVVDELDGGRDGASGDGVLGDLVPFVVARGRDQ 191 G + +VL+ + T L +AR G + G + G G V R + Sbjct: 264 GATDRVLLSGTDQGEAATTLLALARFGGQPTVVLGQQRAVGGGG---STVGPAALREARR 320 Query: 192 GAACDASNQRVFPVILSADPFHSILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLE 371 G A A + P++L D L A ++ + +AH CL EL DTPT+ Sbjct: 321 GMALAA--ELCLPLVLVIDAAGPALSA---AAEQGGLAGQIAH---CLAELVTLDTPTVS 372 Query: 372 AVEGVLGGHPA 404 + G G PA Sbjct: 373 ILLGQGSGGPA 383
>ACCD_MYCBO (P63406) Putative acetyl-coenzyme A carboxylase carboxyl| transferase subunit beta (EC 6.4.1.2) (ACCase beta chain) Length = 495 Score = 28.9 bits (63), Expect = 9.0 Identities = 35/131 (26%), Positives = 52/131 (39%) Frame = +3 Query: 12 GFSQQVLIQSCLI*KGNTALSTVARLGEVVDELDGGRDGASGDGVLGDLVPFVVARGRDQ 191 G + +VL+ + T L +AR G + G + G G V R + Sbjct: 264 GATDRVLLSGTDQGEAATTLLALARFGGQPTVVLGQQRAVGGGG---STVGPAALREARR 320 Query: 192 GAACDASNQRVFPVILSADPFHSILHAYIHSSNSTPICALLAHFLQCLLELALRDTPTLE 371 G A A + P++L D L A ++ + +AH CL EL DTPT+ Sbjct: 321 GMALAA--ELCLPLVLVIDAAGPALSA---AAEQGGLAGQIAH---CLAELVTLDTPTVS 372 Query: 372 AVEGVLGGHPA 404 + G G PA Sbjct: 373 ILLGQGSGGPA 383
>ELK4_MOUSE (P41158) ETS domain-containing protein Elk-4 (Serum response factor| accessory protein 1) (SAP-1) Length = 430 Score = 28.9 bits (63), Expect = 9.0 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Frame = +1 Query: 250 LSTPYSMPTYTP-----ATAPQYAPSLHIFFSVCSSLRFETLP-LWRQSKASSAATLQAP 411 ++TP P P AT+P +PS +L F TLP L + S AT P Sbjct: 190 VTTPAKKPPIEPVAAACATSPSLSPSSEETIQALETLVFPTLPSLETPASISILATTFNP 249 Query: 412 TAPILRKP 435 T P+ P Sbjct: 250 TPPVPSTP 257
>E13B_HEVBR (P52407) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) [Contains: Glucan endo-1,3-beta-glucosidase minor form 3; Glucan endo Length = 374 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = +1 Query: 157 LFPLLSLAAEIRAPLAMPPINAFFQSYCPRTLSTPYSMPT 276 L P++ + IR+PL F +Y PR +S PY++ T Sbjct: 195 LDPIIGFLSSIRSPLLANIYPYFTYAYNPRDISLPYALFT 234
>SODE_HUMAN (P08294) Extracellular superoxide dismutase [Cu-Zn] precursor (EC| 1.15.1.1) (EC-SOD) Length = 240 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/49 (30%), Positives = 21/49 (42%) Frame = -3 Query: 324 ENVQGGRILGCCCWSVCRHGVWSGKGPRTV*LEKRVDWRHRKRRPDLCR 178 EN GR L CC VC G+W + + R ++RR C+ Sbjct: 197 ENGNAGRRLACCVVGVCGPGLWERQA-------REHSERKKRRRESECK 238 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,196,762 Number of Sequences: 219361 Number of extensions: 1274289 Number of successful extensions: 5427 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 5173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5404 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
