ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal24f12 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein Length = 1892 Score = 482 bits (243), Expect = e-133 Identities = 392/442 (88%), Gaps = 6/442 (1%) Strand = Plus / Minus Query: 156 gctcacacaggtgtctaccaagggtattccgaccataagattgtcacctcgaattcagca 215 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1749 gctcacatgggtgtctaccaagggtactccgaccataagattgtcacctcgaattcagca 1690 Query: 216 ccattgacaccaacaagacgttccacatgcaggccgtcggtggcagttttgaactcaagt 275 |||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||| Sbjct: 1689 tcattgacaccaacaagacgtcctgtatggaggccgtcgatggcagttttgaactcaagc 1630 Query: 276 tggcctctaacaatttcatctccggatccaccacgatgaaggtcaagctcaatcgtcagc 335 | ||||||||||||||||||||||||||||||| || ||| ||||||||||||||| ||| Sbjct: 1629 tcgcctctaacaatttcatctccggatccaccatgacgaatgtcaagctcaatcgtgagc 1570 Query: 336 ggtatgtgcaatggcacggcgagtgcatgcctcgccaacggaaccagctcccccggtcgc 395 || ||||||| |||||||| || |||||||||||||| || ||||||||||| |||||| Sbjct: 1569 ggcatgtgcagcggcacggcaagcgcatgcctcgccaaggggaccagctccccaggtcgc 1510 Query: 396 acgtgcactcccttgtcagcggcctccttgtagaagagcacgcaaccgacgtcgaacagc 455 ||| |||||| |||||||||| |||||||||||||| || |||| ||||||||| Sbjct: 1509 acgcgcactc------cagcggcctcgttgtagaagagcacacagccgaaatcgaacagc 1456 Query: 456 ttgctgcgagcaacgatcctgccaacaagatcctcttcgtctcgggactgcaggcgcgca 515 ||||||||||||||||||||||| || ||| || ||||||||||||||||||||| ||| Sbjct: 1455 ttgctgcgagcaacgatcctgccgacgagaaccacttcgtctcgggactgcaggccagca 1396 Query: 516 agcttcacatcgacccggccttggacgccattgctcaggacagcgtagatcacctccgct 575 ||||||||||||||||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 1395 agcttcacatcgacccggccttggacgccgttgcttagaactgcgtagatcacctccgcg 1336 Query: 576 gggccgtagcatgtgtggacag 597 |||||| ||| |||| |||||| Sbjct: 1335 gggccgcagcgtgtgaggacag 1314 Score = 93.7 bits (47), Expect = 6e-16 Identities = 82/93 (88%), Gaps = 3/93 (3%) Strand = Plus / Minus Query: 27 cctttattcattacaaatgtattagaaaatacaaattagtatgtgtca---ataaacact 83 |||||||||||||||||| |||||||||||||||||| |||||||||| | | ||||| Sbjct: 1866 cctttattcattacaaatatattagaaaatacaaattggtatgtgtcaaggaaagacact 1807 Query: 84 tatttttgaactgctagtgagttccatatagta 116 ||||||| |||| || |||||||||||||||| Sbjct: 1806 tatttttcaactcgtactgagttccatatagta 1774
>gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence Length = 1034 Score = 188 bits (95), Expect = 1e-44 Identities = 213/251 (84%), Gaps = 6/251 (2%) Strand = Plus / Minus Query: 225 ccaacaagacgttccacatgcaggccgtcggtggcagttttgaactcaagttggcctcta 284 |||||||| |||||| ||| |||||| ||| |||| ||||||||||| |||| | Sbjct: 795 ccaacaagtcgttccgtgtgctggccgttggtcgcaggattgaactcaaggacccctcca 736 Query: 285 acaatttcatctccggatccaccacgatgaaggtcaagctcaatcgtcagcggtatgtgc 344 ||||||||||| ||||| || ||||| ||||||||||||||||||||||| |||||| Sbjct: 735 acaatttcatcgccgga---acagcgatgcaggtcaagctcaatcgtcagcggcatgtgc 679 Query: 345 aatggcacggcgagtgcatgcctcgccaacggaaccagctcccccggtcgcacgtgcact 404 | |||||||||||||| | |||||||||| |||||||| ||||||||||||||| |||| Sbjct: 678 agcggcacggcgagtgcttccctcgccaactgaaccagcccccccggtcgcacgttcact 619 Query: 405 cccttgtcagcggcctccttgtagaagagcacgcaaccgacgtcgaacagcttgctgcga 464 || |||||| |||| ||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 618 ccattgtca---ccctctttgtagaagagcacgcagccaacgtcaaacagcttgctgcga 562 Query: 465 gcaacgatcct 475 ||||||||||| Sbjct: 561 gcaacgatcct 551 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 526 cgacccggccttggacgccattgctcaggacagcgtagatcacctccgctgggccgtagc 585 ||||||||||||||||||| ||||||||||| || |||||||| || || ||||| |||| Sbjct: 485 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcagggccatagc 426
>gb|AY109619.1| Zea mays CL9605_1 mRNA sequence Length = 1251 Score = 188 bits (95), Expect = 1e-44 Identities = 256/310 (82%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 171 taccaagggtattccgaccataagattgtcacctcgaattcagcaccattgacaccaaca 230 ||||||||||| | ||||||| | |||| ||| || |||||||| ||||| | |||||| Sbjct: 169 taccaagggtactgcgaccatgaaattgccacttccaattcagcgccattttctccaaca 228 Query: 231 agacgttccacatgcaggccgtcggtggcagttttgaactcaagttggcctctaacaatt 290 || |||||| ||| |||||| ||| |||| ||||||||||| |||| ||||||| Sbjct: 229 agtcgttccgtgtgctggccgttggtcgcaggattgaactcaaggacccctccaacaatt 288 Query: 291 tcatctccggatccaccacgatgaaggtcaagctcaatcgtcagcggtatgtgcaatggc 350 ||||| ||||| || ||||| ||||||||||||||||||||||| ||||||| ||| Sbjct: 289 tcatcgccgga---acagcgatgcaggtcaagctcaatcgtcagcggcatgtgcagcggc 345 Query: 351 acggcgagtgcatgcctcgccaacggaaccagctcccccggtcgcacgtgcactcccttg 410 |||||||| || | |||||||||| ||| ||||| |||||||||| |||||| ||| Sbjct: 346 acggcgagcgcttccctcgccaactgaatcagctnnnnnggtcgcacgttcactccattg 405 Query: 411 tcagcggcctccttgtagaagagcacgcaaccgacgtcgaacagcttgctgcgagcaacg 470 ||| | ||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 406 tcacc---ctctttgtagaagagcacgcagccgacgtcgaacagcttgctgcgagcaacg 462 Query: 471 atcctgccaa 480 ||||| |||| Sbjct: 463 atcctcccaa 472 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 526 cgacccggccttggacgccattgctcaggacagcgtagatcacctccgctgggccgtagc 585 ||||||||||||||||||| ||||||||||| || |||||||| || || ||||| |||| Sbjct: 533 cgacccggccttggacgccgttgctcaggacggcatagatcacttcagcggggccatagc 592
>emb|AJ234729.1|HVU234729 Hordeum vulgare genomic DNA fragment; clone MWG2037.uni Length = 328 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 515 aagcttcacatcgacccggccttggacgccattgctcaggacagcgtagatcacctccgc 574 ||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||| Sbjct: 7 aagcttcacgtcgacccggccttggatgccattgcttaggacggcgtagatcacctccgc 66 Query: 575 tgggccgtagcatgtg 590 ||||| |||| |||| Sbjct: 67 ggggccatagcctgtg 82
>emb|CR354427.7| Zebrafish DNA sequence from clone DKEY-263N17 in linkage group 18, complete sequence Length = 164758 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 65 gtatgtgtcaataaacacttattttt 90 |||| ||||||||||||||||||||| Sbjct: 37617 gtatctgtcaataaacacttattttt 37642
>emb|BX324154.5| Zebrafish DNA sequence from clone DKEY-65L24 in linkage group 5, complete sequence Length = 148743 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 tttattcattacaaatgtatta 50 |||||||||||||||||||||| Sbjct: 116625 tttattcattacaaatgtatta 116646
>gb|U88177.1| Caenorhabditis elegans cosmid F53E10, complete sequence Length = 26276 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 taaacacttatttttgaactg 96 ||||||||||||||||||||| Sbjct: 10666 taaacacttatttttgaactg 10646
>emb|BX510936.5| Zebrafish DNA sequence from clone DKEYP-15C6 in linkage group 21, complete sequence Length = 146287 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 aaatgtattagaaaatacaaa 61 ||||||||||||||||||||| Sbjct: 73739 aaatgtattagaaaatacaaa 73759
>gb|AC104078.3| Homo sapiens BAC clone RP11-431M7 from 4, complete sequence Length = 187508 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 aaatgtattagaaaatacaaa 61 ||||||||||||||||||||| Sbjct: 145701 aaatgtattagaaaatacaaa 145721
>emb|BX511264.7| Zebrafish DNA sequence from clone DKEY-31O6 in linkage group 21, complete sequence Length = 145605 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 tagtatgtgtcaataaacacttatt 87 |||||||| |||||||||||||||| Sbjct: 116713 tagtatgtttcaataaacacttatt 116689
>gb|AC105921.5| Homo sapiens BAC clone RP11-541F21 from 2, complete sequence Length = 188183 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 attagaaaatacaaattagta 67 ||||||||||||||||||||| Sbjct: 6255 attagaaaatacaaattagta 6235
>gb|AC068970.6| Homo sapiens BAC clone RP11-84F8 from 2, complete sequence Length = 185993 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 attagaaaatacaaattagta 67 ||||||||||||||||||||| Sbjct: 128839 attagaaaatacaaattagta 128819
>emb|BX901876.11| Zebrafish DNA sequence from clone CH211-140G2 in linkage group 18, complete sequence Length = 155813 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 atatagtagtatttgtatata 129 ||||||||||||||||||||| Sbjct: 107617 atatagtagtatttgtatata 107597
>emb|BX927136.11| Zebrafish DNA sequence from clone DKEY-98O11 in linkage group 18, complete sequence Length = 93818 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 atatagtagtatttgtatata 129 ||||||||||||||||||||| Sbjct: 37930 atatagtagtatttgtatata 37910
>emb|AL928611.9| Mouse DNA sequence from clone RP23-263O5 on chromosome 2, complete sequence Length = 199317 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 tttattcattacaaatgtatt 49 ||||||||||||||||||||| Sbjct: 18919 tttattcattacaaatgtatt 18939
>emb|CR381687.17| Zebrafish DNA sequence from clone DKEY-283C16 in linkage group 11, complete sequence Length = 202525 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 63 tagtatgtgtcaataaacacttatt 87 |||||||| |||||||||||||||| Sbjct: 198310 tagtatgtttcaataaacacttatt 198286
>gb|M89911.1|STMRPLL Streptomyces antibioticus ribosomal proteins L7 and L12 (rplL) gene, complete cds and ribosomal protein L10 (rplJ) gene, complete cds Length = 1451 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 406 ccttgtcagcggcctccttgt 426 ||||||||||||||||||||| Sbjct: 1163 ccttgtcagcggcctccttgt 1143
>gb|AC161329.3| Dasypus novemcinctus clone VMRC5-459N3, complete sequence Length = 144874 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tcacacaggtgtctaccaag 177 |||||||||||||||||||| Sbjct: 25816 tcacacaggtgtctaccaag 25797
>gb|AC069503.25| Homo sapiens 12 BAC RP11-87C12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186580 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ccaccacgatgaaggtcaag 322 |||||||||||||||||||| Sbjct: 151863 ccaccacgatgaaggtcaag 151844
>gb|AF246928.2| Homo sapiens chromosome 21 clone SCb-318B17 map p11-q21.1, complete sequence Length = 171914 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tatagtagtatttgtatata 129 |||||||||||||||||||| Sbjct: 99482 tatagtagtatttgtatata 99463
>ref|XM_752985.1| Ustilago maydis 521 hypothetical protein (UM01931.1) partial mRNA Length = 5037 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 gacccggccttggacgccat 546 |||||||||||||||||||| Sbjct: 2446 gacccggccttggacgccat 2465
>gb|AC121775.3| Mus musculus BAC clone RP23-356B13 from chromosome 6, complete sequence Length = 188443 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 atagctgatagtactccact 153 |||||||||||||||||||| Sbjct: 65721 atagctgatagtactccact 65702
>gb|AC117608.13| Mus musculus chromosome 14, clone RP23-100O3, complete sequence Length = 210905 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 aattagtatgtgtcaataaa 79 |||||||||||||||||||| Sbjct: 54274 aattagtatgtgtcaataaa 54255
>ref|XM_725280.1| Plasmodium yoelii yoelii str. 17XNL protein kinase (PY02490) partial mRNA Length = 8100 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tacaaatgtattagaaaata 57 |||||||||||||||||||| Sbjct: 3090 tacaaatgtattagaaaata 3109
>ref|XM_670702.1| Plasmodium berghei strain ANKA hypothetical protein (PB000166.02.0) partial mRNA Length = 3366 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 tacaaatgtattagaaaata 57 |||||||||||||||||||| Sbjct: 873 tacaaatgtattagaaaata 892
>gb|AC149806.16| Medicago truncatula clone mth2-150h12, complete sequence Length = 113593 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 atatagtagtatttgtatat 128 |||||||||||||||||||| Sbjct: 59110 atatagtagtatttgtatat 59129
>emb|CR855378.6| Zebrafish DNA sequence from clone CH211-284K16 in linkage group 14, complete sequence Length = 151573 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tttattcattacaaatgtat 48 |||||||||||||||||||| Sbjct: 44855 tttattcattacaaatgtat 44874
>emb|Z70678.1|SCXV55KB S.cerevisiae chromosome XV DNA, 54.7 kb region Length = 54719 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tatatattaccctttattca 36 |||||||||||||||||||| Sbjct: 50207 tatatattaccctttattca 50188
>gb|DP000049.1| Dasypus novemcinctus target 126 genomic scaffold Length = 405580 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgtattagaaaatacaaatt 63 |||||||||||||||||||| Sbjct: 213559 tgtattagaaaatacaaatt 213540
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 caggacagcgtagatcacct 570 |||||||||||||||||||| Sbjct: 28727141 caggacagcgtagatcacct 28727122 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tccatatagtagtatttgtatata 129 ||||||||||||||||| |||||| Sbjct: 27326065 tccatatagtagtatttatatata 27326042
>gb|AC092081.3| Gallus gallus clone WAG-77D19, complete sequence Length = 144092 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 cctccttgtagaagagcacg 437 |||||||||||||||||||| Sbjct: 78990 cctccttgtagaagagcacg 78971
>gb|AY115672.1| Brassica oleracea FLC5 (FLC5) gene, exons 2 through 7 and partial cds Length = 2017 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ttcattacaaatgtattaga 52 |||||||||||||||||||| Sbjct: 558 ttcattacaaatgtattaga 577
>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0459B01 Length = 163087 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 caggacagcgtagatcacct 570 |||||||||||||||||||| Sbjct: 43714 caggacagcgtagatcacct 43695
>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1493_H11 Length = 106693 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 106 tccatatagtagtatttgtatata 129 ||||||||||||||||| |||||| Sbjct: 40998 tccatatagtagtatttatatata 40975
>emb|BX649330.5| Zebrafish DNA sequence from clone CH211-140F21 in linkage group 22, complete sequence Length = 163964 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ttcattacaaatgtattaga 52 |||||||||||||||||||| Sbjct: 13885 ttcattacaaatgtattaga 13866
>dbj|BS000018.1| Pan troglodytes chromosome 22 clone:PTB-080A13, map 22, complete sequences Length = 173559 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tatagtagtatttgtatata 129 |||||||||||||||||||| Sbjct: 7125 tatagtagtatttgtatata 7106
>emb|AL929019.4| Zebrafish DNA sequence from clone CH211-149L13, complete sequence Length = 149316 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tttattcattacaaatgtat 48 |||||||||||||||||||| Sbjct: 116891 tttattcattacaaatgtat 116872
>emb|AL163209.2|HS21C009 Homo sapiens chromosome 21 segment HS21C009 Length = 340000 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 tatagtagtatttgtatata 129 |||||||||||||||||||| Sbjct: 53782 tatagtagtatttgtatata 53763
>emb|AL513502.3|HS123J20 Homo sapiens chromosome 9 BAC RP11-123j20, complete sequence Length = 174636 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cctttattcattacaaatgt 46 |||||||||||||||||||| Sbjct: 8935 cctttattcattacaaatgt 8954
>gb|AC136454.4| Mus musculus BAC clone RP24-340J10 from 8, complete sequence Length = 172160 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 tacaaatgtattagaaaatacaaa 61 |||||||||||||| ||||||||| Sbjct: 31655 tacaaatgtattagtaaatacaaa 31678
>emb|Z74986.1|SCYOR078W S.cerevisiae chromosome XV reading frame ORF YOR078w Length = 877 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tatatattaccctttattca 36 |||||||||||||||||||| Sbjct: 778 tatatattaccctttattca 759
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 211 cagcaccattgacaccaacaagac 234 ||||||| |||||||||||||||| Sbjct: 114337 cagcaccgttgacaccaacaagac 114314
>emb|BX000524.6| Zebrafish DNA sequence from clone DKEY-10H3, complete sequence Length = 188685 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 aatgtattagaaaatacaaa 61 |||||||||||||||||||| Sbjct: 54936 aatgtattagaaaatacaaa 54955
>gb|AC134454.4| Mus musculus BAC clone RP24-286K15 from 3, complete sequence Length = 160740 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 tcattacaaatgtattagaa 53 |||||||||||||||||||| Sbjct: 132372 tcattacaaatgtattagaa 132353
>gb|AC140330.3| Mus musculus BAC clone RP23-410I24 from 6, complete sequence Length = 185681 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 atagctgatagtactccact 153 |||||||||||||||||||| Sbjct: 147532 atagctgatagtactccact 147513
>emb|CT009750.2| Medicago truncatula chromosome 5 clone mth2-46a17, COMPLETE SEQUENCE Length = 120704 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cgcacgtgcactcccttgtc 412 |||||||||||||||||||| Sbjct: 18114 cgcacgtgcactcccttgtc 18133
>emb|AL450004.4|HS520K3 Homo sapiens chromosome 9 BAC RP11-520K3, complete sequence Length = 174662 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cctttattcattacaaatgt 46 |||||||||||||||||||| Sbjct: 91103 cctttattcattacaaatgt 91122
>gb|U46033.1|SCU46033 Saccharomyces cerevisiae ATX2 gene, complete cds Length = 1360 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 tatatattaccctttattca 36 |||||||||||||||||||| Sbjct: 40 tatatattaccctttattca 21
>dbj|D50624.1|STMVBRA1 Streptomyces virginiae VbrA gene for NusG like protein, SecE like protein and ribosomal protein, aspartate aminotransferase and adenosine deaminase, complete cds Length = 7409 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 ccttgtcagcggcctccttg 425 |||||||||||||||||||| Sbjct: 7135 ccttgtcagcggcctccttg 7116 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,631,859 Number of Sequences: 3902068 Number of extensions: 4631859 Number of successful extensions: 87230 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87103 Number of HSP's gapped (non-prelim): 120 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
