| Clone Name | rbaal24e04 |
|---|---|
| Clone Library Name | barley_pub |
>YGL4_YEAST (P53134) Putative oligopeptide transporter YGL114w| Length = 725 Score = 68.6 bits (166), Expect = 2e-11 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 5/184 (2%) Frame = -1 Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGNPDGMFKAPY 512 A DLMQD KTG+L +SPR+ F +QLIG +++ + Y + I P F+ P Sbjct: 543 AGDLMQDLKTGHLLGASPRAQFCAQLIGACWSIILSSFMYLCYNKVYSI--PSEQFRIPT 600 Query: 511 AVIFREMSILGVEGFSALPQHCLXXXXXXXXXXXXINLLRDVTPD---SVSKFIPLPMAM 341 AV++ + + L V G LP L ++L+R+ D +IP +A+ Sbjct: 601 AVVWIDCARL-VTG-KGLPDKALECSMILGVIFAVLSLIRNTYRDYGYGWILYIPSGVAV 658 Query: 340 AVPFYIGAYFAIDMFVGTVILFVWEKINRKESEDFSGAV--ASGLICGDGIWSVPSAILS 167 V + F I F+G W K +R + + + +SGL+ G+GI+SV + + Sbjct: 659 GVGIFNSPSFTIARFIGGWASHFWLKNHRGDLNAKTKMIVFSSGLVLGEGIFSVINMLFI 718 Query: 166 IMRI 155 + + Sbjct: 719 CLNV 722
>OPT9_ARATH (Q9FJD2) Probable oligopeptide transporter 9 (AtOPT9)| Length = 741 Score = 42.0 bits (97), Expect = 0.002 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 8/78 (10%) Frame = -1 Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------P 536 A +QDFK G PRSMF++Q++GT + V+ T W W DI + P Sbjct: 511 ALTFIQDFKLGLYMKIPPRSMFMAQVVGTLVSVVVYTGTAW--WLMVDIPHLCDKSLLPP 568 Query: 535 DGMFKAPYAVIFREMSIL 482 D + P +F + S++ Sbjct: 569 DSEWTCPMDRVFFDASVI 586
>OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7)| Length = 766 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%) Frame = -1 Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN-----PDGM 527 A +QDFK G+ PR+MF++Q++GT + C + T W W I N + + Sbjct: 540 AITFLQDFKLGHYMKIPPRTMFMAQIVGTLISCFVYLTTAW--WLMETIPNICDSVTNSV 597 Query: 526 FKAPYAVIFREMSIL 482 + P +F + S++ Sbjct: 598 WTCPSDKVFYDASVI 612
>OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5)| Length = 753 Score = 37.4 bits (85), Expect = 0.043 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%) Frame = -1 Query: 673 DFKTGYLTLSSPRSMFVSQLIGTALGCVIA-PLTFWLYWTAFDIGNPDGMFKA-----PY 512 DFK G+ PRSMF+ QL+ T + ++ T+WL + +I N D + K+ P Sbjct: 529 DFKLGHYMKIPPRSMFIVQLVATIVASTVSFGTTWWLLSSVENICNTDMLPKSSPWTCPG 588 Query: 511 AVIFREMSIL 482 V+F SI+ Sbjct: 589 DVVFYNASII 598
>OPT6_ARATH (Q9T095) Oligopeptide transporter 6 (AtOPT6)| Length = 736 Score = 35.0 bits (79), Expect = 0.22 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Frame = -1 Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------P 536 A + DFK G+ PRSMF++Q+ GT + V+ T W W +I + Sbjct: 506 ALTFISDFKLGHYMKIPPRSMFMAQVAGTLVAVVVYTGTAW--WLMEEIPHLCDTSLLPS 563 Query: 535 DGMFKAPYAVIFREMSIL 482 D + P +F + S++ Sbjct: 564 DSQWTCPMDRVFFDASVI 581
>OPT4_ARATH (Q9FME8) Oligopeptide transporter 4 (AtOPT4)| Length = 729 Score = 35.0 bits (79), Expect = 0.22 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Frame = -1 Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------P 536 A + DFK G+ PRSMF+ Q IGT L I W W I N P Sbjct: 501 AVSFLNDFKLGHYMKIPPRSMFLVQFIGTILAGTINITVAW--WQLNSIKNICQEELLPP 558 Query: 535 DGMFKAPYAVIFREMSIL 482 + + P +F + S++ Sbjct: 559 NSPWTCPGDRVFFDASVI 576
>OPT1_ARATH (Q9FG72) Oligopeptide transporter 1 (AtOPT1)| Length = 755 Score = 34.7 bits (78), Expect = 0.28 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 673 DFKTGYLTLSSPRSMFVSQLIGTALGCVIA-PLTFWLYWTAFDIGNPD 533 DFK G+ PRSMF+ QL+ T + + T+WL + +I N D Sbjct: 531 DFKLGHYMKIPPRSMFIVQLVATVVASTVCFGTTWWLITSVENICNVD 578
>OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2)| Length = 722 Score = 33.9 bits (76), Expect = 0.48 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Frame = -1 Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAF------DIGNPDG 530 A + DFK G+ PRSMF+ Q IGT + + W T+ ++ P+ Sbjct: 467 AISFLNDFKLGHYMKIPPRSMFLVQFIGTVIAGTVNISVAWYLLTSVENICQKELLPPNS 526 Query: 529 MFKAPYAVIFREMSIL 482 + P +F + S++ Sbjct: 527 PWTCPSDRVFFDASVI 542
>Y561_HAEIN (P44016) Putative oligopeptide transporter HI0561| Length = 633 Score = 33.9 bits (76), Expect = 0.48 Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 17/189 (8%) Frame = -1 Query: 685 DLMQDFKTGYLTLSSPRSMFVSQLIGTALGC-VIAPLTFWLYWTAFDIG-------NPDG 530 D +QD KTG L ++P V+ +IG +G VIAP+ LY G +P Sbjct: 400 DNLQDLKTGLLVEATPWRQQVALIIGCFVGALVIAPVLEILYHAYGFSGALPRPDMDPSQ 459 Query: 529 MFKAPYAVIFREMSILGVEGFSALPQHCLXXXXXXXXXXXXINLLRDVTPDSVSKFIPLP 350 AP A + +S G+ + L L+ V+ +K LP Sbjct: 460 ALSAPQATLMTAIS-QGIFTNKLEWTYILTGVGLGAVLITIDAFLKKVS----NKVFSLP 514 Query: 349 -MAMAVPFYIGAYFAIDMFVGTVILFVW----EKINRKE----SEDFSGAVASGLICGDG 197 +A+ + Y+ + VG + ++ K+ KE +E F ++GLI G+ Sbjct: 515 VIAVGIGIYLPPSINTPVIVGAFLAWIMARHIAKLGNKEVSAKAERFGTLFSAGLIVGES 574 Query: 196 IWSVPSAIL 170 + V A + Sbjct: 575 LMGVILAFI 583
>TOXC_COCCA (Q92215) Putative fatty acid synthase subunit TOXC [Includes:| 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase (EC 2.3.1.3 Length = 2080 Score = 33.1 bits (74), Expect = 0.82 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%) Frame = +3 Query: 366 LDTLSGVTSLRRLIAMAAKKKKE---QIARQCCGSAENPSTP 482 LDTL+GVT RL+ + A + +E +I RQC ++ STP Sbjct: 1927 LDTLAGVTDRLRLLQINASEMEECLHEIIRQCVQETKSKSTP 1968
>SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)| Length = 960 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = -1 Query: 394 RDVTPDSVSKFIPLPMAMAVPFYIGAYFAIDMFV-GTVILFVWEKINRKESED 239 RD++P S S+ IP+P+ +A + A FA+ V G ++ + NR+ S+D Sbjct: 621 RDLSPASASRSIPIPLLLAC---VAAAFALGASVSGLLVSCACRRANRRRSKD 670
>SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)| Length = 931 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = -1 Query: 394 RDVTPDSVSKFIPLPMAMAVPFYIGAYFAIDMFV-GTVILFVWEKINRKESED 239 RD++P S S+ IP+P+ +A + A FA+ V G ++ + NR+ S+D Sbjct: 591 RDLSPASASRSIPIPLLLAC---VAAAFALGASVSGLLVSCACRRANRRRSKD 640
>OPT8_ARATH (Q9FJD1) Probable oligopeptide transporter 8 (AtOPT8)| Length = 733 Score = 31.6 bits (70), Expect = 2.4 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 8/74 (10%) Frame = -1 Query: 679 MQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMF 524 + D K G PR+MF++Q++GT + + T W W +I N P + Sbjct: 509 LSDLKLGTYMKIPPRTMFMAQVVGTLVAVIAYAGTAW--WLMAEIPNLCDTNLLPPGSQW 566 Query: 523 KAPYAVIFREMSIL 482 P +F + S++ Sbjct: 567 TCPSDRVFFDASVI 580 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,277,431 Number of Sequences: 219361 Number of extensions: 2320690 Number of successful extensions: 6164 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 5909 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6149 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)