ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YGL4_YEAST (P53134) Putative oligopeptide transporter YGL114w 69 2e-11
2OPT9_ARATH (Q9FJD2) Probable oligopeptide transporter 9 (AtOPT9) 42 0.002
3OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7) 42 0.002
4OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5) 37 0.043
5OPT6_ARATH (Q9T095) Oligopeptide transporter 6 (AtOPT6) 35 0.22
6OPT4_ARATH (Q9FME8) Oligopeptide transporter 4 (AtOPT4) 35 0.22
7OPT1_ARATH (Q9FG72) Oligopeptide transporter 1 (AtOPT1) 35 0.28
8OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2) 34 0.48
9Y561_HAEIN (P44016) Putative oligopeptide transporter HI0561 34 0.48
10TOXC_COCCA (Q92215) Putative fatty acid synthase subunit TOXC [I... 33 0.82
11SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y) 32 1.8
12SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sem... 32 1.8
13OPT8_ARATH (Q9FJD1) Probable oligopeptide transporter 8 (AtOPT8) 32 2.4

>YGL4_YEAST (P53134) Putative oligopeptide transporter YGL114w|
          Length = 725

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
 Frame = -1

Query: 691  AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGNPDGMFKAPY 512
            A DLMQD KTG+L  +SPR+ F +QLIG     +++   +  Y   + I  P   F+ P 
Sbjct: 543  AGDLMQDLKTGHLLGASPRAQFCAQLIGACWSIILSSFMYLCYNKVYSI--PSEQFRIPT 600

Query: 511  AVIFREMSILGVEGFSALPQHCLXXXXXXXXXXXXINLLRDVTPD---SVSKFIPLPMAM 341
            AV++ + + L V G   LP   L            ++L+R+   D       +IP  +A+
Sbjct: 601  AVVWIDCARL-VTG-KGLPDKALECSMILGVIFAVLSLIRNTYRDYGYGWILYIPSGVAV 658

Query: 340  AVPFYIGAYFAIDMFVGTVILFVWEKINRKESEDFSGAV--ASGLICGDGIWSVPSAILS 167
             V  +    F I  F+G      W K +R +    +  +  +SGL+ G+GI+SV + +  
Sbjct: 659  GVGIFNSPSFTIARFIGGWASHFWLKNHRGDLNAKTKMIVFSSGLVLGEGIFSVINMLFI 718

Query: 166  IMRI 155
             + +
Sbjct: 719  CLNV 722



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>OPT9_ARATH (Q9FJD2) Probable oligopeptide transporter 9 (AtOPT9)|
          Length = 741

 Score = 42.0 bits (97), Expect = 0.002
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
 Frame = -1

Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------P 536
           A   +QDFK G      PRSMF++Q++GT +  V+   T W  W   DI +        P
Sbjct: 511 ALTFIQDFKLGLYMKIPPRSMFMAQVVGTLVSVVVYTGTAW--WLMVDIPHLCDKSLLPP 568

Query: 535 DGMFKAPYAVIFREMSIL 482
           D  +  P   +F + S++
Sbjct: 569 DSEWTCPMDRVFFDASVI 586



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>OPT7_ARATH (O82485) Oligopeptide transporter 7 (AtOPT7)|
          Length = 766

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
 Frame = -1

Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN-----PDGM 527
           A   +QDFK G+     PR+MF++Q++GT + C +   T W  W    I N      + +
Sbjct: 540 AITFLQDFKLGHYMKIPPRTMFMAQIVGTLISCFVYLTTAW--WLMETIPNICDSVTNSV 597

Query: 526 FKAPYAVIFREMSIL 482
           +  P   +F + S++
Sbjct: 598 WTCPSDKVFYDASVI 612



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>OPT5_ARATH (Q9SUA4) Oligopeptide transporter 5 (AtOPT5)|
          Length = 753

 Score = 37.4 bits (85), Expect = 0.043
 Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
 Frame = -1

Query: 673 DFKTGYLTLSSPRSMFVSQLIGTALGCVIA-PLTFWLYWTAFDIGNPDGMFKA-----PY 512
           DFK G+     PRSMF+ QL+ T +   ++   T+WL  +  +I N D + K+     P 
Sbjct: 529 DFKLGHYMKIPPRSMFIVQLVATIVASTVSFGTTWWLLSSVENICNTDMLPKSSPWTCPG 588

Query: 511 AVIFREMSIL 482
            V+F   SI+
Sbjct: 589 DVVFYNASII 598



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>OPT6_ARATH (Q9T095) Oligopeptide transporter 6 (AtOPT6)|
          Length = 736

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
 Frame = -1

Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------P 536
           A   + DFK G+     PRSMF++Q+ GT +  V+   T W  W   +I +         
Sbjct: 506 ALTFISDFKLGHYMKIPPRSMFMAQVAGTLVAVVVYTGTAW--WLMEEIPHLCDTSLLPS 563

Query: 535 DGMFKAPYAVIFREMSIL 482
           D  +  P   +F + S++
Sbjct: 564 DSQWTCPMDRVFFDASVI 581



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>OPT4_ARATH (Q9FME8) Oligopeptide transporter 4 (AtOPT4)|
          Length = 729

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = -1

Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------P 536
           A   + DFK G+     PRSMF+ Q IGT L   I     W  W    I N        P
Sbjct: 501 AVSFLNDFKLGHYMKIPPRSMFLVQFIGTILAGTINITVAW--WQLNSIKNICQEELLPP 558

Query: 535 DGMFKAPYAVIFREMSIL 482
           +  +  P   +F + S++
Sbjct: 559 NSPWTCPGDRVFFDASVI 576



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>OPT1_ARATH (Q9FG72) Oligopeptide transporter 1 (AtOPT1)|
          Length = 755

 Score = 34.7 bits (78), Expect = 0.28
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -1

Query: 673 DFKTGYLTLSSPRSMFVSQLIGTALGCVIA-PLTFWLYWTAFDIGNPD 533
           DFK G+     PRSMF+ QL+ T +   +    T+WL  +  +I N D
Sbjct: 531 DFKLGHYMKIPPRSMFIVQLVATVVASTVCFGTTWWLITSVENICNVD 578



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>OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2)|
          Length = 722

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 6/76 (7%)
 Frame = -1

Query: 691 AADLMQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAF------DIGNPDG 530
           A   + DFK G+     PRSMF+ Q IGT +   +     W   T+       ++  P+ 
Sbjct: 467 AISFLNDFKLGHYMKIPPRSMFLVQFIGTVIAGTVNISVAWYLLTSVENICQKELLPPNS 526

Query: 529 MFKAPYAVIFREMSIL 482
            +  P   +F + S++
Sbjct: 527 PWTCPSDRVFFDASVI 542



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>Y561_HAEIN (P44016) Putative oligopeptide transporter HI0561|
          Length = 633

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 17/189 (8%)
 Frame = -1

Query: 685 DLMQDFKTGYLTLSSPRSMFVSQLIGTALGC-VIAPLTFWLYWTAFDIG-------NPDG 530
           D +QD KTG L  ++P    V+ +IG  +G  VIAP+   LY      G       +P  
Sbjct: 400 DNLQDLKTGLLVEATPWRQQVALIIGCFVGALVIAPVLEILYHAYGFSGALPRPDMDPSQ 459

Query: 529 MFKAPYAVIFREMSILGVEGFSALPQHCLXXXXXXXXXXXXINLLRDVTPDSVSKFIPLP 350
              AP A +   +S  G+        + L               L+ V+    +K   LP
Sbjct: 460 ALSAPQATLMTAIS-QGIFTNKLEWTYILTGVGLGAVLITIDAFLKKVS----NKVFSLP 514

Query: 349 -MAMAVPFYIGAYFAIDMFVGTVILFVW----EKINRKE----SEDFSGAVASGLICGDG 197
            +A+ +  Y+       + VG  + ++      K+  KE    +E F    ++GLI G+ 
Sbjct: 515 VIAVGIGIYLPPSINTPVIVGAFLAWIMARHIAKLGNKEVSAKAERFGTLFSAGLIVGES 574

Query: 196 IWSVPSAIL 170
           +  V  A +
Sbjct: 575 LMGVILAFI 583



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>TOXC_COCCA (Q92215) Putative fatty acid synthase subunit TOXC [Includes:|
            3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase (EC
            4.2.1.61); Enoyl-[acyl-carrier-protein] reductase [NADH]
            (EC 1.3.1.9); [Acyl-carrier-protein] acetyltransferase
            (EC 2.3.1.3
          Length = 2080

 Score = 33.1 bits (74), Expect = 0.82
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = +3

Query: 366  LDTLSGVTSLRRLIAMAAKKKKE---QIARQCCGSAENPSTP 482
            LDTL+GVT   RL+ + A + +E   +I RQC    ++ STP
Sbjct: 1927 LDTLAGVTDRLRLLQINASEMEECLHEIIRQCVQETKSKSTP 1968



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>SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 960

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -1

Query: 394 RDVTPDSVSKFIPLPMAMAVPFYIGAYFAIDMFV-GTVILFVWEKINRKESED 239
           RD++P S S+ IP+P+ +A    + A FA+   V G ++     + NR+ S+D
Sbjct: 621 RDLSPASASRSIPIPLLLAC---VAAAFALGASVSGLLVSCACRRANRRRSKD 670



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>SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 931

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
 Frame = -1

Query: 394 RDVTPDSVSKFIPLPMAMAVPFYIGAYFAIDMFV-GTVILFVWEKINRKESED 239
           RD++P S S+ IP+P+ +A    + A FA+   V G ++     + NR+ S+D
Sbjct: 591 RDLSPASASRSIPIPLLLAC---VAAAFALGASVSGLLVSCACRRANRRRSKD 640



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>OPT8_ARATH (Q9FJD1) Probable oligopeptide transporter 8 (AtOPT8)|
          Length = 733

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
 Frame = -1

Query: 679 MQDFKTGYLTLSSPRSMFVSQLIGTALGCVIAPLTFWLYWTAFDIGN--------PDGMF 524
           + D K G      PR+MF++Q++GT +  +    T W  W   +I N        P   +
Sbjct: 509 LSDLKLGTYMKIPPRTMFMAQVVGTLVAVIAYAGTAW--WLMAEIPNLCDTNLLPPGSQW 566

Query: 523 KAPYAVIFREMSIL 482
             P   +F + S++
Sbjct: 567 TCPSDRVFFDASVI 580


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,277,431
Number of Sequences: 219361
Number of extensions: 2320690
Number of successful extensions: 6164
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6149
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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