ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24d18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-) 45 5e-05
2RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4... 38 0.009
3CPGP1_ZINOF (P82473) Cysteine proteinase GP-I (EC 3.4.22.-) 36 0.033
4CYSP4_BRANA (P25251) Cysteine proteinase COT44 precursor (EC 3.4... 35 0.056
5CYSPL_LYCES (P20721) Low-temperature-induced cysteine proteinase... 35 0.056
6GCP1_ARATH (Q94B08) Germination-specific cysteine protease 1 pre... 33 0.21
7CYSP1_ORYSA (Q7XR52) Cysteine protease 1 precursor (EC 3.4.22.-)... 31 0.81
8ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-) 31 0.81
9BROM2_ANACO (P14518) Bromelain, stem (EC 3.4.22.32) 29 3.1
10CYSEP_PHAVU (P25803) Vignain precursor (EC 3.4.22.-) (Bean endop... 29 4.0
11ERVB_TABDI (P60994) Ervatamin-B (EC 3.4.22.-) (ERV-B) 29 4.0
12CYSP_HEMSP (P43156) Thiol protease SEN102 precursor (EC 3.4.22.-) 28 5.3
13CPR1_ARATH (Q9LT77) Probable cysteine proteinase At3g19400 precu... 28 9.0

>ORYA_ORYSA (P25776) Oryzain alpha chain precursor (EC 3.4.22.-)|
          Length = 458

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 25/52 (48%), Positives = 27/52 (51%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSYXXXXXXXXXXXXXXXXXXXXXXSVCDSYNEC 2
           RME NIKASSGKCGIAVEPSY                      +VCD+Y  C
Sbjct: 322 RMERNIKASSGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTC 373



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>RD21A_ARATH (P43297) Cysteine proteinase RD21a precursor (EC 3.4.22.-) (RD21)|
          Length = 462

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSY 95
           RM  NI +SSGKCGIA+EPSY
Sbjct: 330 RMARNIASSSGKCGIAIEPSY 350



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>CPGP1_ZINOF (P82473) Cysteine proteinase GP-I (EC 3.4.22.-)|
          Length = 221

 Score = 35.8 bits (81), Expect = 0.033
 Identities = 15/21 (71%), Positives = 17/21 (80%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSY 95
           R+E NI  SSGKCGIA+ PSY
Sbjct: 194 RVERNIAESSGKCGIAISPSY 214



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>CYSP4_BRANA (P25251) Cysteine proteinase COT44 precursor (EC 3.4.22.-)|
           (Fragment)
          Length = 328

 Score = 35.0 bits (79), Expect = 0.056
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSY 95
           RME N+ + SGKCGIA+E SY
Sbjct: 293 RMERNVASKSGKCGIAIEASY 313



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>CYSPL_LYCES (P20721) Low-temperature-induced cysteine proteinase precursor (EC|
           3.4.22.-) (Fragment)
          Length = 346

 Score = 35.0 bits (79), Expect = 0.056
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSYXXXXXXXXXXXXXXXXXXXXXXSVCDSYNEC 2
           R++ N+ +SSG CG+A+EPSY                      + CD Y++C
Sbjct: 211 RVQRNVSSSSGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQC 262



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>GCP1_ARATH (Q94B08) Germination-specific cysteine protease 1 precursor (EC|
           3.4.22.-)
          Length = 376

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 17/22 (77%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
 Frame = -2

Query: 157 RMEXNIKAS-SGKCGIAVEPSY 95
           RME N+ AS SGKCGIAVE SY
Sbjct: 338 RMERNLAASKSGKCGIAVEASY 359



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>CYSP1_ORYSA (Q7XR52) Cysteine protease 1 precursor (EC 3.4.22.-) (OsCP1)|
          Length = 490

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSY 95
           RME N+ A +GKCGIA+  SY
Sbjct: 352 RMERNVTARTGKCGIAMMASY 372



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>ORYB_ORYSA (P25777) Oryzain beta chain precursor (EC 3.4.22.-)|
          Length = 471

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSY 95
           RME NI  ++GKCGIA+  SY
Sbjct: 334 RMERNINVTTGKCGIAMMASY 354



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>BROM2_ANACO (P14518) Bromelain, stem (EC 3.4.22.32)|
          Length = 212

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSY 95
           RM  ++ +SSG CGIA++P Y
Sbjct: 187 RMARDVSSSSGICGIAIDPLY 207



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>CYSEP_PHAVU (P25803) Vignain precursor (EC 3.4.22.-) (Bean endopeptidase)|
           (Cysteine proteinase EP-C1)
          Length = 362

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSY 95
           RM+ NI    G CGIA+ PSY
Sbjct: 322 RMQRNISKKEGLCGIAMLPSY 342



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>ERVB_TABDI (P60994) Ervatamin-B (EC 3.4.22.-) (ERV-B)|
          Length = 215

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -2

Query: 154 MEXNIKASSGKCGIAVEPSY 95
           ME N+ +S+G CGIA  PSY
Sbjct: 192 MERNVASSAGLCGIAQLPSY 211



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>CYSP_HEMSP (P43156) Thiol protease SEN102 precursor (EC 3.4.22.-)|
          Length = 360

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSY 95
           RM+  I    GKCGIA+E SY
Sbjct: 323 RMQRGISDKRGKCGIAMEASY 343



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>CPR1_ARATH (Q9LT77) Probable cysteine proteinase At3g19400 precursor (EC|
           3.4.22.-)
          Length = 362

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 157 RMEXNIKASSGKCGIAVEPSY 95
           +++ NI    GKCGIA+ PSY
Sbjct: 326 KLQRNIDDPFGKCGIAMMPSY 346


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,779,924
Number of Sequences: 219361
Number of extensions: 91323
Number of successful extensions: 152
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 80,573,946
effective HSP length: 28
effective length of database: 74,431,838
effective search space used: 1786364112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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