ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal23o15 |
|---|---|
| Clone Library Name | barley_pub |
>CUCM1_CUCME (Q39547) Cucumisin precursor (EC 3.4.21.25) (Allergen Cuc m 1)| Length = 731 Score = 48.1 bits (113), Expect = 9e-06 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%) Frame = -2 Query: 385 VHIVYVDRP-EDADPEEFHIRTLSPVLGSEEKARDAVLYHYKHAASGFSAKLTAEQVEDL 209 ++IVY+ R ED D H R + + A ++VL+ YK + +GF+ KLT E+ E + Sbjct: 33 IYIVYMGRKLEDPDSAHLHHRAMLEQVVGSTFAPESVLHTYKRSFNGFAVKLTEEEAEKI 92 Query: 208 KKQPGVLQVVPSQTLQLH 155 GV+ V ++ +LH Sbjct: 93 ASMEGVVSVFLNEMNELH 110
>SUBL_ARATH (O65351) Subtilisin-like protease precursor (EC 3.4.21.-)| (Cucumisin-like serine protease) Length = 757 Score = 45.8 bits (107), Expect = 4e-05 Identities = 23/54 (42%), Positives = 32/54 (59%) Frame = -2 Query: 280 VLYHYKHAASGFSAKLTAEQVEDLKKQPGVLQVVPSQTLQLHGQEGGHASTTRT 119 +LY Y++A GFS +LT E+ + L QPGV+ V+P +LH TTRT Sbjct: 65 LLYTYENAIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELH--------TTRT 110
>XSP1_ARATH (Q9LLL8) Xylem serine proteinase 1 precursor (EC 3.4.21.-) (AtXSP1)| (Cucumisin-like protein) Length = 749 Score = 42.4 bits (98), Expect = 5e-04 Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Frame = -2 Query: 382 HIVYV-DRPEDADPE-EFHIRTLSPVLGSEEKARDAVLYHYKHAASGFSAKLTAEQVEDL 209 +I+Y+ DRP++ + + HI LS + S+E+A++ +Y Y A + F+AKL+ + + + Sbjct: 38 YIIYLGDRPDNTEETIKTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKKM 97 Query: 208 KKQPGVLQVVPSQTLQLH 155 + V+ V +Q +LH Sbjct: 98 MEMEEVVSVSRNQYRKLH 115
>DAG_ANTMA (Q38732) DAG protein, chloroplast precursor| Length = 230 Score = 40.8 bits (94), Expect = 0.001 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Frame = -2 Query: 379 IVYVDRPEDADPE-----EFHIRTLSPVLGSEEKARDAVLYHYKHAASGFSAKLTAEQVE 215 ++ ++ P+D P + ++ TL+ VLGS E+A+ + +GF +T E E Sbjct: 90 LIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSE 149 Query: 214 DLKKQPGVLQVVPSQTLQLHGQEGG 140 K PGVL V+P + + ++ G Sbjct: 150 KFKGLPGVLWVLPDSYIDVKNKDYG 174
>CUDP_METAN (P29138) Cuticle-degrading protease precursor (EC 3.4.21.-) (PR1)| (Chymoelastase) Length = 388 Score = 31.6 bits (70), Expect = 0.83 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = -2 Query: 268 YKHAASGFSAKLTAEQVEDLKKQPGVLQVVPSQTLQLHG 152 Y+HA GF+ LT E+++ L++ PGV + +++ G Sbjct: 70 YEHAFHGFAGSLTKEELKMLREHPGVDFIEKDAVMRISG 108
>PROA_VIBAL (P16588) Alkaline serine exoprotease A precursor (EC 3.4.21.-)| Length = 534 Score = 31.2 bits (69), Expect = 1.1 Identities = 16/51 (31%), Positives = 26/51 (50%) Frame = -2 Query: 268 YKHAASGFSAKLTAEQVEDLKKQPGVLQVVPSQTLQLHGQEGGHASTTRTM 116 + H+ SGF A L+ EQ++DL+ P V + + L L A+ T + Sbjct: 98 FDHSISGFVANLSPEQLKDLRSDPRVDYIEQDRILSLDPIVSADANQTNAI 148
>ODO2_AZOVI (P20708) Dihydrolipoyllysine-residue succinyltransferase component| of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) (E2) (Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex) Length = 398 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/77 (24%), Positives = 32/77 (41%) Frame = -2 Query: 337 FHIRTLSPVLGSEEKARDAVLYHYKHAASGFSAKLTAEQVEDLKKQPGVLQVVPSQTLQL 158 F+ + PV+ K +D + GF + VE LK+QPGV + + Sbjct: 197 FNEVNMKPVMELRAKYKDLFEKTHNGVRLGFMSFFVKAAVEALKRQPGVNASIDGNDIVY 256 Query: 157 HGQEGGHASTTRTMGLM 107 HG + + + GL+ Sbjct: 257 HGYQDIGVAVSSDRGLV 273
>DHX15_MOUSE (O35286) Putative pre-mRNA-splicing factor ATP-dependent RNA| helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15) Length = 795 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = -2 Query: 385 VHIVYVDRPEDADPEEFHIRTLSPVLGSEEKARDAVLYHYKHAASGFSAKLTAEQVEDLK 206 V I Y PE D E IRT+ + EE+ D +L+ + K +V+DL Sbjct: 319 VEIFYTPEPE-RDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLG 377 Query: 205 KQPGVLQVVP 176 + G ++++P Sbjct: 378 PEVGDIKIIP 387
>DHX15_HUMAN (O43143) Putative pre-mRNA-splicing factor ATP-dependent RNA| helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15) (ATP-dependent RNA helicase #46) Length = 795 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/70 (28%), Positives = 33/70 (47%) Frame = -2 Query: 385 VHIVYVDRPEDADPEEFHIRTLSPVLGSEEKARDAVLYHYKHAASGFSAKLTAEQVEDLK 206 V I Y PE D E IRT+ + EE+ D +L+ + K +V+DL Sbjct: 319 VEIFYTPEPE-RDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLG 377 Query: 205 KQPGVLQVVP 176 + G ++++P Sbjct: 378 PEVGDIKIIP 387
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/31 (38%), Positives = 13/31 (41%) Frame = +2 Query: 26 TVHPLFLHYSHEMRRPSDHHSHTIRLSHKAH 118 TVHP LH H P +HH H H Sbjct: 51 TVHPEHLHEEHHHHHPEEHHEPHHEEHHHHH 81
>SYT_METMA (Q8PRY4) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 634 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Frame = -2 Query: 370 VDRPEDADPEEFHIRTLSPV--LGSEEKARDAVLYHYKHAASGFSAKLTAEQV 218 V+ ++A+PEE + +S + + ++ K +LY Y H +S S+ A QV Sbjct: 44 VESVDEANPEEAIKKAVSEIEKVAAQVKTNRIMLYPYAHLSSDLSSPKVAVQV 96
>SYT_METAC (Q8TLX7) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 635 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Frame = -2 Query: 370 VDRPEDADPEEFHIRTLSPV--LGSEEKARDAVLYHYKHAASGFSAKLTAEQV 218 V+ ++A+PEE + +S + + ++ K +LY Y H +S S+ A QV Sbjct: 44 VESVDEANPEEAIEKAVSEIEKVAAQVKTNRIMLYPYAHLSSDLSSPKVAVQV 96 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,992,221 Number of Sequences: 219361 Number of extensions: 947475 Number of successful extensions: 3115 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3031 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3113 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
