Clone Name	rbaal24d11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clon...	450	e-123
2	ref|XM_469523.1| Oryza sativa (japonica cultivar-group), mRNA	422	e-115
3	gb|AY107839.1| Zea mays PCO143146 mRNA sequence	317	3e-83
4	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	172	1e-39
5	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	172	1e-39
6	gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033...	172	1e-39
7	ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzy...	147	6e-32
8	gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugati...	147	6e-32
9	gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugati...	147	6e-32
10	gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete s...	147	6e-32
11	gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete s...	139	1e-29
12	gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence	127	5e-26
13	ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzy...	125	2e-25
14	ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzy...	123	8e-25
15	gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, comple...	123	8e-25
16	gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, comple...	123	8e-25
17	emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Co...	123	8e-25
18	ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzy...	119	1e-23
19	gb|AY093340.1| Arabidopsis thaliana similar to DNA binding prote...	119	1e-23
20	gb|AY059896.1| Arabidopsis thaliana similar to DNA binding prote...	119	1e-23
21	gb|AY104181.1| Zea mays PCO060230 mRNA sequence	119	1e-23
22	gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme ...	117	5e-23
23	gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 m...	111	3e-21
24	ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzy...	107	5e-20
25	gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2, ub...	107	5e-20
26	gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398)...	107	5e-20
27	gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete se...	107	5e-20
28	gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana...	107	5e-20
29	dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clon...	103	7e-19
30	ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzy...	101	3e-18
31	gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A...	101	3e-18
32	dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clon...	100	1e-17
33	dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clon...	100	1e-17
34	gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 ma...	96	2e-16
35	gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, part...	94	7e-16
36	gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence	92	3e-15
37	gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete ...	92	3e-15
38	gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete se...	92	3e-15
39	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	92	3e-15
40	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	92	3e-15
41	emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa...	92	3e-15
42	dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone...	86	2e-13
43	gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugat...	84	7e-13
44	gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme fa...	84	7e-13
45	emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BA...	84	7e-13
46	emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BA...	84	7e-13
47	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	82	3e-12
48	dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic D...	82	3e-12
49	dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic D...	82	3e-12
50	gb|BT016303.1| Zea mays clone Contig136 mRNA sequence	80	1e-11
51	gb|AY103581.1| Zea mays PCO136340 mRNA sequence	80	1e-11
52	gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, pa...	62	3e-06
53	gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome	46	0.15
54	gb|AC122214.4| Mus musculus BAC clone RP23-104J10 from chromosom...	42	2.3
55	gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosom...	40	9.3
56	gb|AC150858.4| Bos taurus BAC CH240-431L22 (Children's Hospital...	40	9.3
57	gb|AY810971.1| Schistosoma japonicum SJCHGC06791 protein mRNA, p...	40	9.3
58	emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chrom...	40	9.3
59	ref|XM_778081.1| PREDICTED: Strongylocentrotus purpuratus simila...	40	9.3
60	gb|AF401037.1| Lactobacillus sakei phosphoribosylpyrophosphate a...	40	9.3
61	gb|AC098864.3| Homo sapiens BAC clone RP11-359L10 from 4, comple...	40	9.3
62	emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in...	40	9.3
63	emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in ...	40	9.3
64	dbj|AK080940.1| Mus musculus 4 days neonate male adipose cDNA, R...	40	9.3
65	gb|AC079811.6| Homo sapiens BAC clone CTD-2502L6 from 2, complet...	40	9.3
66	emb|BX001066.14| Mouse DNA sequence from clone RP23-463P1 on chr...	40	9.3
67	gb|AC006963.4|AC006963 Homo sapiens PAC clone RP1-278D1 from X, ...	40	9.3
68	emb|CR936503.1| Lactobacillus sakei strain 23K complete genome	40	9.3
69	dbj|AK114407.1| Ciona intestinalis cDNA, clone:cieg001f08, full ...	40	9.3
70	gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete ge...	40	9.3
71	gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome	40	9.3
72	emb|AL772344.4| Mouse DNA sequence from clone RP23-235J15 on chr...	40	9.3
73	emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chr...	40	9.3
74	gb|AC145556.4| Mus musculus BAC clone RP23-308E7 from chromosome...	40	9.3

---

>dbj|AK120951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L10, full
           insert sequence
          Length = 790

 Score =  450 bits (227), Expect = e-123
 Identities = 419/483 (86%)
 Strand = Plus / Minus

                                                                       
Query: 190 actgtacattgcaatgcgcgtatcttacataacgacacatctagctgctagccctttctg 249
           ||||||||||||||| ||| | |||||||| | |||||| |||   | ||||||||||||
Sbjct: 603 actgtacattgcaattcgcatctcttacatgatgacacacctaagcgatagccctttctg 544

                                                                       
Query: 250 ctccactctctgatcatcgttgccttcatggggctggtggagcctgcggttctgaggggt 309
            || ||||| ||||| || ||||| |||||||| || |||||||| || |||||||| | 
Sbjct: 543 ttctactctttgatcttcattgccatcatggggttgatggagcctacgattctgaggagc 484

                                                                       
Query: 310 tgacatctcctttttaaggctgatgaggatgtcctccattgtatgttccctttgccagtt 369
            |||||||||||||| | || ||| |||||||| | |||||||||||| |||||||||||
Sbjct: 483 agacatctccttttttaagccgatcaggatgtcttgcattgtatgttctctttgccagtt 424

                                                                       
Query: 370 tccaagcatcgggaatcttcttggatcaaccattccagtttcttgattcacgcatgtcat 429
            |||||||| ||||||   ||||| |||||||||||||||||||||||||| |||| |||
Sbjct: 423 accaagcatggggaatagacttggttcaaccattccagtttcttgattcacacatgacat 364

                                                                       
Query: 430 attgaccctggcctggaaccggacagtcggtggtttgtctggataatctgtatcacagaa 489
           |||||  |  | |||||| || ||||| |||||| |||||||||| ||||||||||||||
Sbjct: 363 attgattcgagtctggaatcgaacagtaggtggtctgtctggatagtctgtatcacagaa 304

                                                                       
Query: 490 cagcttcaattgatagattcgtccctcatgaacagtattgggtggaccaataatagttcc 549
           || |||||| ||||||||||||||||||||||||||||| || || ||||| ||||||||
Sbjct: 303 caacttcaactgatagattcgtccctcatgaacagtattaggagggccaatgatagttcc 244

                                                                       
Query: 550 tgtccaggagcgcatatatatgtcatcagcatcatccatcccatagctcacagttccatc 609
           ||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 243 tgtccaggaacgcatatatatgtcatcagcatcatccattccatagctcactgtcccatc 184

                                                                       
Query: 610 accaatgcctttctcacctctctcaagttcttccaaaagtctaaagtttctgggaacgac 669
           ||||||||| |||||||||| |||||| ||||| |  |||||||||||||||||||||||
Sbjct: 183 accaatgcccttctcacctcgctcaagctcttcaagcagtctaaagtttctgggaacgac 124

              
Query: 670 gac 672
           |||
Sbjct: 123 gac 121

---

>ref|XM_469523.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 486

 Score =  422 bits (213), Expect = e-115
 Identities = 375/429 (87%)
 Strand = Plus / Minus

                                                                       
Query: 238 tagccctttctgctccactctctgatcatcgttgccttcatggggctggtggagcctgcg 297
           |||||||||||| || ||||| ||||| || ||||| |||||||| || |||||||| ||
Sbjct: 462 tagccctttctgttctactctttgatcttcattgccatcatggggttgatggagcctacg 403

                                                                       
Query: 298 gttctgaggggttgacatctcctttttaaggctgatgaggatgtcctccattgtatgttc 357
            |||||||| |  |||||||||||||| | || ||| |||||||| | ||||||||||||
Sbjct: 402 attctgaggagcagacatctccttttttaagccgatcaggatgtcttgcattgtatgttc 343

                                                                       
Query: 358 cctttgccagtttccaagcatcgggaatcttcttggatcaaccattccagtttcttgatt 417
            ||||||||||| |||||||| ||||||   ||||| |||||||||||||||||||||||
Sbjct: 342 tctttgccagttaccaagcatggggaatagacttggttcaaccattccagtttcttgatt 283

                                                                       
Query: 418 cacgcatgtcatattgaccctggcctggaaccggacagtcggtggtttgtctggataatc 477
           ||| |||| ||||||||  |  | |||||| || ||||| |||||| |||||||||| ||
Sbjct: 282 cacacatgacatattgattcgagtctggaatcgaacagtaggtggtctgtctggatagtc 223

                                                                       
Query: 478 tgtatcacagaacagcttcaattgatagattcgtccctcatgaacagtattgggtggacc 537
           |||||||||||||| |||||| ||||||||||||||||||||||||||||| || || ||
Sbjct: 222 tgtatcacagaacaacttcaactgatagattcgtccctcatgaacagtattaggagggcc 163

                                                                       
Query: 538 aataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatagct 597
           ||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 162 aatgatagttcctgtccaggaacgcatatatatgtcatcagcatcatccattccatagct 103

                                                                       
Query: 598 cacagttccatcaccaatgcctttctcacctctctcaagttcttccaaaagtctaaagtt 657
           ||| || |||||||||||||| |||||||||| |||||| ||||| |  |||||||||||
Sbjct: 102 cactgtcccatcaccaatgcccttctcacctcgctcaagctcttcaagcagtctaaagtt 43

                    
Query: 658 tctgggaac 666
           |||||||||
Sbjct: 42  tctgggaac 34

---

>gb|AY107839.1| Zea mays PCO143146 mRNA sequence
          Length = 1245

 Score =  317 bits (160), Expect = 3e-83
 Identities = 244/272 (89%)
 Strand = Plus / Minus

                                                                       
Query: 398 accattccagtttcttgattcacgcatgtcatattgaccctggcctggaaccggacagtc 457
           |||| |||||||||||| ||||| ||||||||||||| ||  | |||||| |||||||||
Sbjct: 524 accaatccagtttcttggttcacacatgtcatattgatccgagtctggaatcggacagtc 465

                                                                       
Query: 458 ggtggtttgtctggataatctgtatcacagaacagcttcaattgatagattcgtccctca 517
           |||||||| |||||||||||||||||||| |||||||| || ||||||||||||||||| 
Sbjct: 464 ggtggtttatctggataatctgtatcacaaaacagctttaactgatagattcgtccctcg 405

                                                                       
Query: 518 tgaacagtattgggtggaccaataatagttcctgtccaggagcgcatatatatgtcatca 577
           |||||||| ||||| |||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct: 404 tgaacagtgttgggaggaccaatgatagttcctgtccaggaccgcataaatatgtcatca 345

                                                                       
Query: 578 gcatcatccatcccatagctcacagttccatcaccaatgcctttctcacctctctcaagt 637
           ||||| ||||||||||||||||||||||||||||||||||| |||||||| |  || |||
Sbjct: 344 gcatcgtccatcccatagctcacagttccatcaccaatgcccttctcaccacgttctagt 285

                                           
Query: 638 tcttccaaaagtctaaagtttctgggaacgac 669
           ||||| |  || ||||||||||||||||||||
Sbjct: 284 tcttctagcagcctaaagtttctgggaacgac 253



 Score =  107 bits (54), Expect = 5e-20
 Identities = 117/138 (84%)
 Strand = Plus / Minus

                                                                       
Query: 241 ccctttctgctccactctctgatcatcgttgccttcatggggctggtggagcctgcggtt 300
           |||||||||||| ||||| || || || ||||||||||| || ||||  |||||||| ||
Sbjct: 777 ccctttctgctctactctttggtcttcattgccttcatgaggttggtacagcctgcgatt 718

                                                                       
Query: 301 ctgaggggttgacatctcctttttaaggctgatgaggatgtcctccattgtatgttccct 360
           ||| || |||||||||||| |||| | |||| | || ||||||||||| |||||||||||
Sbjct: 717 ctgtggagttgacatctccctttttaagctggtcagaatgtcctccatcgtatgttccct 658

                             
Query: 361 ttgccagtttccaagcat 378
           || ||| |||||||||||
Sbjct: 657 ttcccactttccaagcat 640

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  172 bits (87), Expect = 1e-39
 Identities = 120/131 (91%)
 Strand = Plus / Minus

                                                                            
Query: 536      ccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatag 595
                ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 28490637 ccaatgatagttcctgtccaggaacgcatatatatgtcatcagcatcatccattccatag 28490578

                                                                            
Query: 596      ctcacagttccatcaccaatgcctttctcacctctctcaagttcttccaaaagtctaaag 655
                ||||| || |||||||||||||| |||||||||| |||||| ||||| |  |||||||||
Sbjct: 28490577 ctcactgtcccatcaccaatgcccttctcacctcgctcaagctcttcaagcagtctaaag 28490518

                           
Query: 656      tttctgggaac 666
                |||||||||||
Sbjct: 28490517 tttctgggaac 28490507



 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                            
Query: 398      accattccagtttcttgattcacgcatgtcatattgaccctggcctggaaccggacagtc 457
                ||||||||||||||||||||||| |||| ||||||||  |  | |||||| || ||||| 
Sbjct: 28490867 accattccagtttcttgattcacacatgacatattgattcgagtctggaatcgaacagta 28490808

                                                                            
Query: 458      ggtggtttgtctggataatctgtatcacagaacagcttcaattgatagattcgtccctca 517
                |||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 28490807 ggtggtctgtctggatagtctgtatcacagaacaacttcaactgatagattcgtccctca 28490748

                        
Query: 518      tgaacagt 525
                ||||||||
Sbjct: 28490747 tgaacagt 28490740



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                            
Query: 275      tcatggggctggtggagcctgcggttctgaggggttgacatctcctttttaaggctgatg 334
                |||||||| || |||||||| || |||||||| |  |||||||||||||| | || ||| 
Sbjct: 28491075 tcatggggttgatggagcctacgattctgaggagcagacatctccttttttaagccgatc 28491016

                                                                   
Query: 335      aggatgtcctccattgtatgttccctttgccagtttccaagcatcgggaat 385
                |||||||| | |||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 28491015 aggatgtcttgcattgtatgttctctttgccagttaccaagcatggggaat 28490965



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                            
Query: 190      actgtacattgcaatgcgcgtatcttacataacgacacatctagctgctagccctttctg 249
                ||||||||||||||| ||| | |||||||| | |||||| |||   | ||||||||||||
Sbjct: 28491482 actgtacattgcaattcgcatctcttacatgatgacacacctaagcgatagccctttctg 28491423

                                         
Query: 250      ctccactctctgatcatcgttgcct 274
                 || ||||| ||||| || ||||||
Sbjct: 28491422 ttctactctttgatcttcattgcct 28491398

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  172 bits (87), Expect = 1e-39
 Identities = 120/131 (91%)
 Strand = Plus / Minus

                                                                            
Query: 536      ccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatag 595
                ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 28581961 ccaatgatagttcctgtccaggaacgcatatatatgtcatcagcatcatccattccatag 28581902

                                                                            
Query: 596      ctcacagttccatcaccaatgcctttctcacctctctcaagttcttccaaaagtctaaag 655
                ||||| || |||||||||||||| |||||||||| |||||| ||||| |  |||||||||
Sbjct: 28581901 ctcactgtcccatcaccaatgcccttctcacctcgctcaagctcttcaagcagtctaaag 28581842

                           
Query: 656      tttctgggaac 666
                |||||||||||
Sbjct: 28581841 tttctgggaac 28581831



 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                            
Query: 398      accattccagtttcttgattcacgcatgtcatattgaccctggcctggaaccggacagtc 457
                ||||||||||||||||||||||| |||| ||||||||  |  | |||||| || ||||| 
Sbjct: 28582191 accattccagtttcttgattcacacatgacatattgattcgagtctggaatcgaacagta 28582132

                                                                            
Query: 458      ggtggtttgtctggataatctgtatcacagaacagcttcaattgatagattcgtccctca 517
                |||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 28582131 ggtggtctgtctggatagtctgtatcacagaacaacttcaactgatagattcgtccctca 28582072

                        
Query: 518      tgaacagt 525
                ||||||||
Sbjct: 28582071 tgaacagt 28582064



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                            
Query: 275      tcatggggctggtggagcctgcggttctgaggggttgacatctcctttttaaggctgatg 334
                |||||||| || |||||||| || |||||||| |  |||||||||||||| | || ||| 
Sbjct: 28582399 tcatggggttgatggagcctacgattctgaggagcagacatctccttttttaagccgatc 28582340

                                                                   
Query: 335      aggatgtcctccattgtatgttccctttgccagtttccaagcatcgggaat 385
                |||||||| | |||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 28582339 aggatgtcttgcattgtatgttctctttgccagttaccaagcatggggaat 28582289



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                            
Query: 190      actgtacattgcaatgcgcgtatcttacataacgacacatctagctgctagccctttctg 249
                ||||||||||||||| ||| | |||||||| | |||||| |||   | ||||||||||||
Sbjct: 28582806 actgtacattgcaattcgcatctcttacatgatgacacacctaagcgatagccctttctg 28582747

                                         
Query: 250      ctccactctctgatcatcgttgcct 274
                 || ||||| ||||| || ||||||
Sbjct: 28582746 ttctactctttgatcttcattgcct 28582722

---

>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete
             sequence
          Length = 143681

 Score =  172 bits (87), Expect = 1e-39
 Identities = 120/131 (91%)
 Strand = Plus / Minus

                                                                         
Query: 536   ccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatag 595
             ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 84767 ccaatgatagttcctgtccaggaacgcatatatatgtcatcagcatcatccattccatag 84708

                                                                         
Query: 596   ctcacagttccatcaccaatgcctttctcacctctctcaagttcttccaaaagtctaaag 655
             ||||| || |||||||||||||| |||||||||| |||||| ||||| |  |||||||||
Sbjct: 84707 ctcactgtcccatcaccaatgcccttctcacctcgctcaagctcttcaagcagtctaaag 84648

                        
Query: 656   tttctgggaac 666
             |||||||||||
Sbjct: 84647 tttctgggaac 84637



 Score =  143 bits (72), Expect = 9e-31
 Identities = 114/128 (89%)
 Strand = Plus / Minus

                                                                         
Query: 398   accattccagtttcttgattcacgcatgtcatattgaccctggcctggaaccggacagtc 457
             ||||||||||||||||||||||| |||| ||||||||  |  | |||||| || ||||| 
Sbjct: 84997 accattccagtttcttgattcacacatgacatattgattcgagtctggaatcgaacagta 84938

                                                                         
Query: 458   ggtggtttgtctggataatctgtatcacagaacagcttcaattgatagattcgtccctca 517
             |||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 84937 ggtggtctgtctggatagtctgtatcacagaacaacttcaactgatagattcgtccctca 84878

                     
Query: 518   tgaacagt 525
             ||||||||
Sbjct: 84877 tgaacagt 84870



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                         
Query: 275   tcatggggctggtggagcctgcggttctgaggggttgacatctcctttttaaggctgatg 334
             |||||||| || |||||||| || |||||||| |  |||||||||||||| | || ||| 
Sbjct: 85205 tcatggggttgatggagcctacgattctgaggagcagacatctccttttttaagccgatc 85146

                                                                
Query: 335   aggatgtcctccattgtatgttccctttgccagtttccaagcatcgggaat 385
             |||||||| | |||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 85145 aggatgtcttgcattgtatgttctctttgccagttaccaagcatggggaat 85095



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 70/85 (82%)
 Strand = Plus / Minus

                                                                         
Query: 190   actgtacattgcaatgcgcgtatcttacataacgacacatctagctgctagccctttctg 249
             ||||||||||||||| ||| | |||||||| | |||||| |||   | ||||||||||||
Sbjct: 85612 actgtacattgcaattcgcatctcttacatgatgacacacctaagcgatagccctttctg 85553

                                      
Query: 250   ctccactctctgatcatcgttgcct 274
              || ||||| ||||| || ||||||
Sbjct: 85552 ttctactctttgatcttcattgcct 85528

---

>ref|NM_129165.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT2G36060 transcript variant
           AT2G36060.1 mRNA, complete cds
          Length = 837

 Score =  147 bits (74), Expect = 6e-32
 Identities = 155/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           |||||||| |||||||| ||||| || || |||||| | |||||||| |||||||| |||
Sbjct: 438 tggaaccgaacagtcggaggtttctcagggtaatctttgtcacagaagagcttcaactga 379

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           || || || |||||||| ||||| ||| | ||||| || ||||| || ||||| ||||||
Sbjct: 378 taaatccgaccctcatgtacagtgttgtgaggaccgatgatagtgccagtccaagagcgc 319

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 318 atataaatgtcatctccatcatccattccatagctcacagttccatctccaatacctttc 259

             
Query: 623 tc 624
           ||
Sbjct: 258 tc 257

---

>gb|AY093382.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
           (At2g36060) mRNA, complete cds
          Length = 531

 Score =  147 bits (74), Expect = 6e-32
 Identities = 155/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           |||||||| |||||||| ||||| || || |||||| | |||||||| |||||||| |||
Sbjct: 254 tggaaccgaacagtcggaggtttctcagggtaatctttgtcacagaagagcttcaactga 195

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           || || || |||||||| ||||| ||| | ||||| || ||||| || ||||| ||||||
Sbjct: 194 taaatccgaccctcatgtacagtgttgtgaggaccgatgatagtgccagtccaagagcgc 135

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 134 atataaatgtcatctccatcatccattccatagctcacagttccatctccaatacctttc 75

             
Query: 623 tc 624
           ||
Sbjct: 74  tc 73

---

>gb|AY062760.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme
           (At2g36060; F11F19.3) mRNA, complete cds
          Length = 769

 Score =  147 bits (74), Expect = 6e-32
 Identities = 155/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           |||||||| |||||||| ||||| || || |||||| | |||||||| |||||||| |||
Sbjct: 372 tggaaccgaacagtcggaggtttctcagggtaatctttgtcacagaagagcttcaactga 313

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           || || || |||||||| ||||| ||| | ||||| || ||||| || ||||| ||||||
Sbjct: 312 taaatccgaccctcatgtacagtgttgtgaggaccgatgatagtgccagtccaagagcgc 253

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 252 atataaatgtcatctccatcatccattccatagctcacagttccatctccaatacctttc 193

             
Query: 623 tc 624
           ||
Sbjct: 192 tc 191

---

>gb|AY089084.1| Arabidopsis thaliana clone 29951 mRNA, complete sequence
          Length = 798

 Score =  147 bits (74), Expect = 6e-32
 Identities = 155/182 (85%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           |||||||| |||||||| ||||| || || |||||| | |||||||| |||||||| |||
Sbjct: 414 tggaaccgaacagtcggaggtttctcagggtaatctttgtcacagaagagcttcaactga 355

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           || || || |||||||| ||||| ||| | ||||| || ||||| || ||||| ||||||
Sbjct: 354 taaatccgaccctcatgtacagtgttgtgaggaccgatgatagtgccagtccaagagcgc 295

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 294 atataaatgtcatctccatcatccattccatagctcacagttccatctccaatacctttc 235

             
Query: 623 tc 624
           ||
Sbjct: 234 tc 233

---

>gb|AY085609.1| Arabidopsis thaliana clone 16125 mRNA, complete sequence
          Length = 832

 Score =  139 bits (70), Expect = 1e-29
 Identities = 154/182 (84%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           |||||||||||||| || ||||| || || |||||| | ||||| || |||||||| |||
Sbjct: 384 tggaaccggacagttggaggtttctccgggtaatctttgtcacaaaagagcttcaactga 325

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           |||||||  || ||||||||||| ||| | ||||| || ||||| || ||||| || |||
Sbjct: 324 tagattctaccttcatgaacagtgttgtgaggaccgatgatagtgccagtccaagaacgc 265

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 264 atatagatgtcatctccatcatccattccatagctcacagttccatccccaatacctttc 205

             
Query: 623 tc 624
           ||
Sbjct: 204 tc 203

---

>gb|BT017181.1| Zea mays clone EL01N0369E04.c mRNA sequence
          Length = 822

 Score =  127 bits (64), Expect = 5e-26
 Identities = 193/236 (81%)
 Strand = Plus / Minus

                                                                       
Query: 389 cttggatcaaccattccagtttcttgattcacgcatgtcatattgaccctggcctggaac 448
           ||||||||||||||||| || || ||||| ||||||||||| ||||  || |  ||||| 
Sbjct: 463 cttggatcaaccattcctgtctcgtgattaacgcatgtcatgttgattcttgagtggaat 404

                                                                       
Query: 449 cggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattgatagatt 508
           | |||||  ||||| || || ||||| ||| | ||||| |||| |||||  || ||||| 
Sbjct: 403 ctgacagatggtggcttctccggatagtctttgtcacaaaacaacttcagctggtagatg 344

                                                                       
Query: 509 cgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgcatatat 568
           || |||||||| ||||||||| | || ||||| || || || ||||| || ||||| || 
Sbjct: 343 cgaccctcatgtacagtattgtgagggccaatgatggtaccagtccatgaccgcatgtag 284

                                                                   
Query: 569 atgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttctc 624
           |||||||||||||||||||| ||||||||||| || |||||||||||||| |||||
Sbjct: 283 atgtcatcagcatcatccattccatagctcactgtcccatcaccaatgcccttctc 228

---

>ref|NM_179928.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT2G36060 transcript variant
           AT2G36060.2 mRNA, complete cds
          Length = 840

 Score =  125 bits (63), Expect = 2e-25
 Identities = 155/185 (83%), Gaps = 3/185 (1%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           |||||||| |||||||| ||||| || || |||||| | |||||||| |||||||| |||
Sbjct: 441 tggaaccgaacagtcggaggtttctcagggtaatctttgtcacagaagagcttcaactga 382

                                                                       
Query: 503 tagattcgtccctcatgaacagta---ttgggtggaccaataatagttcctgtccaggag 559
           || || || |||||||| |||||    ||| | ||||| || ||||| || ||||| |||
Sbjct: 381 taaatccgaccctcatgtacagttacgttgtgaggaccgatgatagtgccagtccaagag 322

                                                                       
Query: 560 cgcatatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcct 619
           |||||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| |||
Sbjct: 321 cgcatataaatgtcatctccatcatccattccatagctcacagttccatctccaatacct 262

                
Query: 620 ttctc 624
           |||||
Sbjct: 261 ttctc 257

---

>ref|NM_115116.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT3G52560 transcript variant
           AT3G52560.1 mRNA, complete cds
          Length = 864

 Score =  123 bits (62), Expect = 8e-25
 Identities = 152/182 (83%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           ||||| |||||||| || ||||| || || |||||| | ||||| || |||||||| |||
Sbjct: 383 tggaatcggacagttggaggtttctccgggtaatctttgtcacaaaagagcttcaactga 324

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           |||||||  || ||||||||||| ||| | ||||| || || || || ||||| || |||
Sbjct: 323 tagattctaccttcatgaacagtgttgtgaggaccgatgatggtgccagtccaagaacgc 264

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 263 atatagatgtcatctccatcatccattccatagctcacagttccatccccaatacctttc 204

             
Query: 623 tc 624
           ||
Sbjct: 203 tc 202

---

>gb|AY072492.1| Arabidopsis thaliana unknown protein mRNA, complete cds
          Length = 587

 Score =  123 bits (62), Expect = 8e-25
 Identities = 152/182 (83%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           ||||| |||||||| || ||||| || || |||||| | ||||| || |||||||| |||
Sbjct: 257 tggaatcggacagttggaggtttctccgggtaatctttgtcacaaaagagcttcaactga 198

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           |||||||  || ||||||||||| ||| | ||||| || || || || ||||| || |||
Sbjct: 197 tagattctaccttcatgaacagtgttgtgaggaccgatgatggtgccagtccaagaacgc 138

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 137 atatagatgtcatctccatcatccattccatagctcacagttccatccccaatacctttc 78

             
Query: 623 tc 624
           ||
Sbjct: 77  tc 76

---

>gb|AY042846.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 810

 Score =  123 bits (62), Expect = 8e-25
 Identities = 152/182 (83%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           ||||| |||||||| || ||||| || || |||||| | ||||| || |||||||| |||
Sbjct: 332 tggaatcggacagttggaggtttctccgggtaatctttgtcacaaaagagcttcaactga 273

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           |||||||  || ||||||||||| ||| | ||||| || || || || ||||| || |||
Sbjct: 272 tagattctaccttcatgaacagtgttgtgaggaccgatgatggtgccagtccaagaacgc 213

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 212 atatagatgtcatctccatcatccattccatagctcacagttccatccccaatacctttc 153

             
Query: 623 tc 624
           ||
Sbjct: 152 tc 151

---

>emb|BX825709.1|CNS0A69P Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL58ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 838

 Score =  123 bits (62), Expect = 8e-25
 Identities = 152/182 (83%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           ||||| |||||||| || ||||| || || |||||| | ||||| || |||||||| |||
Sbjct: 358 tggaatcggacagttggaggtttctccgggtaatctttgtcacaaaagagcttcaactga 299

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           |||||||  || ||||||||||| ||| | ||||| || || || || ||||| || |||
Sbjct: 298 tagattctaccttcatgaacagtgttgtgaggaccgatgatggtgccagtccaagaacgc 239

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 238 atatagatgtcatctccatcatccattccatagctcacagttccatccccaatacctttc 179

             
Query: 623 tc 624
           ||
Sbjct: 178 tc 177

---

>ref|NM_102175.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G23260 mRNA, complete cds
          Length = 772

 Score =  119 bits (60), Expect = 1e-23
 Identities = 129/152 (84%)
 Strand = Plus / Minus

                                                                       
Query: 522 cagtattgggtggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcat 581
           ||||||| || ||||||| ||| || || ||||| ||  ||||||| || ||||||||||
Sbjct: 286 cagtattaggaggaccaagaatggtgccagtccaagattgcatataaatatcatcagcat 227

                                                                       
Query: 582 catccatcccatagctcacagttccatcaccaatgcctttctcacctctctcaagttctt 641
           ||||||| |||||||| ||||| ||||| ||||| |||||||||||||| ||||| ||||
Sbjct: 226 catccattccatagctaacagtaccatctccaatacctttctcacctctttcaagctctt 167

                                           
Query: 642 ccaaaagtctaaagtttctgggaacgacgacc 673
           |||| | ||||||||| || ||||| ||||||
Sbjct: 166 ccaacaatctaaagttcctcggaacaacgacc 135

---

>gb|AY093340.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260)
           mRNA, complete cds
          Length = 618

 Score =  119 bits (60), Expect = 1e-23
 Identities = 129/152 (84%)
 Strand = Plus / Minus

                                                                       
Query: 522 cagtattgggtggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcat 581
           ||||||| || ||||||| ||| || || ||||| ||  ||||||| || ||||||||||
Sbjct: 172 cagtattaggaggaccaagaatggtgccagtccaagattgcatataaatatcatcagcat 113

                                                                       
Query: 582 catccatcccatagctcacagttccatcaccaatgcctttctcacctctctcaagttctt 641
           ||||||| |||||||| ||||| ||||| ||||| |||||||||||||| ||||| ||||
Sbjct: 112 catccattccatagctaacagtaccatctccaatacctttctcacctctttcaagctctt 53

                                           
Query: 642 ccaaaagtctaaagtttctgggaacgacgacc 673
           |||| | ||||||||| || ||||| ||||||
Sbjct: 52  ccaacaatctaaagttcctcggaacaacgacc 21

---

>gb|AY059896.1| Arabidopsis thaliana similar to DNA binding protein (At1g23260;
           F26F24.10) mRNA, complete cds
          Length = 771

 Score =  119 bits (60), Expect = 1e-23
 Identities = 129/152 (84%)
 Strand = Plus / Minus

                                                                       
Query: 522 cagtattgggtggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcat 581
           ||||||| || ||||||| ||| || || ||||| ||  ||||||| || ||||||||||
Sbjct: 286 cagtattaggaggaccaagaatggtgccagtccaagattgcatataaatatcatcagcat 227

                                                                       
Query: 582 catccatcccatagctcacagttccatcaccaatgcctttctcacctctctcaagttctt 641
           ||||||| |||||||| ||||| ||||| ||||| |||||||||||||| ||||| ||||
Sbjct: 226 catccattccatagctaacagtaccatctccaatacctttctcacctctttcaagctctt 167

                                           
Query: 642 ccaaaagtctaaagtttctgggaacgacgacc 673
           |||| | ||||||||| || ||||| ||||||
Sbjct: 166 ccaacaatctaaagttcctcggaacaacgacc 135

---

>gb|AY104181.1| Zea mays PCO060230 mRNA sequence
          Length = 1061

 Score =  119 bits (60), Expect = 1e-23
 Identities = 192/236 (81%)
 Strand = Plus / Minus

                                                                       
Query: 389 cttggatcaaccattccagtttcttgattcacgcatgtcatattgaccctggcctggaac 448
           ||||||||||||||||| || || ||||| ||||||||||| ||||  || |  ||||| 
Sbjct: 582 cttggatcaaccattcctgtctcgtgattaacgcatgtcatgttgattcttgagtggaat 523

                                                                       
Query: 449 cggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattgatagatt 508
           | |||||  ||||| || || ||||| ||  | ||||| |||| |||||  || ||||| 
Sbjct: 522 ctgacagatggtggcttctccggatagtccttgtcacaaaacaacttcagctggtagatg 463

                                                                       
Query: 509 cgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgcatatat 568
           || |||||||| ||||||||| | || ||||| || || || ||||| || ||||| || 
Sbjct: 462 cgaccctcatgtacagtattgtgagggccaatgatggtaccagtccatgaccgcatgtag 403

                                                                   
Query: 569 atgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttctc 624
           |||||||||||||||||||| ||||||||||| || |||||||||||||| |||||
Sbjct: 402 atgtcatcagcatcatccattccatagctcactgtcccatcaccaatgcccttctc 347

---

>gb|AY587772.1| Tamarix androssowii ubiquitin-conjugating enzyme family protein
           mRNA, complete cds
          Length = 607

 Score =  117 bits (59), Expect = 5e-23
 Identities = 146/175 (83%)
 Strand = Plus / Minus

                                                                       
Query: 470 ggataatctgtatcacagaacagcttcaattgatagattcgtccctcatgaacagtattg 529
           ||||||||| | |||||||| ||||||| |||||| || || |||||||| |||||||||
Sbjct: 331 ggataatctttgtcacagaagagcttcagttgataaatgcggccctcatgtacagtattg 272

                                                                       
Query: 530 ggtggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatc 589
            | |||||||| || || |||||||| || ||||||||||| |||||  |||||||||| 
Sbjct: 271 tgaggaccaattattgtgcctgtccaagaacgcatatatatatcatctccatcatccata 212

                                                                  
Query: 590 ccatagctcacagttccatcaccaatgcctttctcacctctctcaagttcttcca 644
           ||||| || ||| ||||||| ||||| ||||| ||||| |  |||||||| ||||
Sbjct: 211 ccataactgacacttccatctccaattcctttttcaccacgttcaagttcctcca 157

---

>gb|DQ097727.1| Arachis hypogaea ubiquitin-conjugating enzyme 2 mRNA, complete cds
          Length = 818

 Score =  111 bits (56), Expect = 3e-21
 Identities = 155/188 (82%)
 Strand = Plus / Minus

                                                                       
Query: 458 ggtggtttgtctggataatctgtatcacagaacagcttcaattgatagattcgtccctca 517
           ||||| ||||||||||||||  || |||| ||||  |||||||| ||||| || || || 
Sbjct: 343 ggtggattgtctggataatccttaccacaaaacaatttcaattggtagatacgcccttcg 284

                                                                       
Query: 518 tgaacagtattgggtggaccaataatagttcctgtccaggagcgcatatatatgtcatca 577
           || ||||||   || ||||| ||||| || || ||||| ||  |||| || || ||||||
Sbjct: 283 tggacagtaccagggggacctataattgtcccagtccatgattgcatgtagatatcatca 224

                                                                       
Query: 578 gcatcatccatcccatagctcacagttccatcaccaatgcctttctcacctctctcaagt 637
           ||||||||||| |||||||| ||||||||||| ||||| || ||||||||||||||||| 
Sbjct: 223 gcatcatccattccatagcttacagttccatctccaattcccttctcacctctctcaagc 164

                   
Query: 638 tcttccaa 645
           ||||||||
Sbjct: 163 tcttccaa 156

---

>ref|NM_105734.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G70660 mRNA, complete cds
          Length = 838

 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 572 tcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttctcacctctc 631
           ||||||||||||||||| ||||| ||||| || ||||| ||||| |||||||||||||| 
Sbjct: 282 tcatcagcatcatccattccataactcactgtcccatctccaattcctttctcacctctt 223

                                                     
Query: 632 tcaagttcttccaaaagtctaaagtttctgggaacgacgacc 673
           || || |||||||| | |||||||||||||||||| ||||||
Sbjct: 222 tctagctcttccaataatctaaagtttctgggaacaacgacc 181

---

>gb|BT004943.1| Arabidopsis thaliana clone U20398 putative E2,
           ubiquitin-conjugating enzyme (At1g70660) mRNA, complete
           cds
          Length = 511

 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 572 tcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttctcacctctc 631
           ||||||||||||||||| ||||| ||||| || ||||| ||||| |||||||||||||| 
Sbjct: 122 tcatcagcatcatccattccataactcactgtcccatctccaattcctttctcacctctt 63

                                                     
Query: 632 tcaagttcttccaaaagtctaaagtttctgggaacgacgacc 673
           || || |||||||| | |||||||||||||||||| ||||||
Sbjct: 62  tctagctcttccaataatctaaagtttctgggaacaacgacc 21

---

>gb|BT004011.1| Arabidopsis thaliana clone RAFL14-86-C24 (R20398) putative E2,
           ubiquitin-conjugating enzyme (At1g70660) mRNA, complete
           cds
          Length = 827

 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 572 tcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttctcacctctc 631
           ||||||||||||||||| ||||| ||||| || ||||| ||||| |||||||||||||| 
Sbjct: 267 tcatcagcatcatccattccataactcactgtcccatctccaattcctttctcacctctt 208

                                                     
Query: 632 tcaagttcttccaaaagtctaaagtttctgggaacgacgacc 673
           || || |||||||| | |||||||||||||||||| ||||||
Sbjct: 207 tctagctcttccaataatctaaagtttctgggaacaacgacc 166

---

>gb|AY088344.1| Arabidopsis thaliana clone 5821 mRNA, complete sequence
          Length = 815

 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                       
Query: 572 tcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttctcacctctc 631
           ||||||||||||||||| ||||| ||||| || ||||| ||||| |||||||||||||| 
Sbjct: 259 tcatcagcatcatccattccataactcactgtcccatctccaattcctttctcacctctt 200

                                                     
Query: 632 tcaagttcttccaaaagtctaaagtttctgggaacgacgacc 673
           || || |||||||| | |||||||||||||||||| ||||||
Sbjct: 199 tctagctcttccaataatctaaagtttctgggaacaacgacc 158

---

>gb|AC005292.4|AC005292 Genomic sequence for Arabidopsis thaliana BAC F26F24 from chromosome I,
             complete sequence
          Length = 99053

 Score =  107 bits (54), Expect = 5e-20
 Identities = 93/106 (87%)
 Strand = Plus / Plus

                                                                         
Query: 561   gcatatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctt 620
             ||||||| || ||||||||||||||||| |||||||| ||||| ||||| ||||| ||||
Sbjct: 34576 gcatataaatatcatcagcatcatccattccatagctaacagtaccatctccaatacctt 34635

                                                           
Query: 621   tctcacctctctcaagttcttccaaaagtctaaagtttctgggaac 666
             |||||||||| ||||| |||||||| | ||||||||| || |||||
Sbjct: 34636 tctcacctctttcaagctcttccaacaatctaaagttcctcggaac 34681

---

>dbj|AK068060.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B07, full
           insert sequence
          Length = 924

 Score =  103 bits (52), Expect = 7e-19
 Identities = 154/188 (81%)
 Strand = Plus / Minus

                                                                       
Query: 485 cagaacagcttcaattgatagattcgtccctcatgaacagtattgggtggaccaataata 544
           ||||| ||||||| ||| || || || |||||||| ||||| ||  | ||||||||||| 
Sbjct: 416 cagaaaagcttcagttggtatatccggccctcatggacagtgttatggggaccaataatt 357

                                                                       
Query: 545 gttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatagctcacagtt 604
           || |||||||| |||||||| || || || || ||||||||||| |||||||| || | |
Sbjct: 356 gtgcctgtccaagagcgcatgtagatatcgtctgcatcatccattccatagcttactgat 297

                                                                       
Query: 605 ccatcaccaatgcctttctcacctctctcaagttcttccaaaagtctaaagtttctggga 664
           |||||||| ||||| ||||| ||||||||||| ||||| |  ||||| ||||| || || 
Sbjct: 296 ccatcaccgatgcccttctcccctctctcaagctcttctagcagtctgaagttcctaggc 237

                   
Query: 665 acgacgac 672
           ||||||||
Sbjct: 236 acgacgac 229

---

>ref|NM_180353.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT3G52560 transcript variant
           AT3G52560.2 mRNA, complete cds
          Length = 864

 Score =  101 bits (51), Expect = 3e-18
 Identities = 152/185 (82%), Gaps = 3/185 (1%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           ||||| |||||||| || ||||| || || |||||| | ||||| || |||||||| |||
Sbjct: 386 tggaatcggacagttggaggtttctccgggtaatctttgtcacaaaagagcttcaactga 327

                                                                       
Query: 503 tagattcgtccctcatgaacagta---ttgggtggaccaataatagttcctgtccaggag 559
           |||||||  || |||||||||||    ||| | ||||| || || || || ||||| || 
Sbjct: 326 tagattctaccttcatgaacagttacgttgtgaggaccgatgatggtgccagtccaagaa 267

                                                                       
Query: 560 cgcatatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcct 619
           |||||||| ||||||||  |||||||||| |||||||||||||||||||| ||||| |||
Sbjct: 266 cgcatatagatgtcatctccatcatccattccatagctcacagttccatccccaatacct 207

                
Query: 620 ttctc 624
           |||||
Sbjct: 206 ttctc 202

---

>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete
             sequence
          Length = 108582

 Score =  101 bits (51), Expect = 3e-18
 Identities = 84/95 (88%)
 Strand = Plus / Plus

                                                                         
Query: 572   tcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttctcacctctc 631
             ||||||||||||||||| ||||| ||||| || ||||| ||||| |||||||||||||| 
Sbjct: 63537 tcatcagcatcatccattccataactcactgtcccatctccaattcctttctcacctctt 63596

                                                
Query: 632   tcaagttcttccaaaagtctaaagtttctgggaac 666
             || || |||||||| | ||||||||||||||||||
Sbjct: 63597 tctagctcttccaataatctaaagtttctgggaac 63631

---

>dbj|AK104965.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C07, full
           insert sequence
          Length = 833

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 122/146 (83%)
 Strand = Plus / Minus

                                                                       
Query: 482 tcacagaacagcttcaattgatagattcgtccctcatgaacagtattgggtggaccaata 541
           ||||||||||||||||  || ||||| || || ||||| ||| ||||  |||||||||| 
Sbjct: 282 tcacagaacagcttcagctggtagatgcgaccttcatggacactattatgtggaccaatg 223

                                                                       
Query: 542 atagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatagctcaca 601
           || || || ||||| || ||||| || |||||||| ||||||||||| ||||||||||| 
Sbjct: 222 atggtgccagtccaagaccgcatgtagatgtcatctgcatcatccattccatagctcacg 163

                                     
Query: 602 gttccatcaccaatgcctttctcacc 627
           |||||||| |||||||| || |||||
Sbjct: 162 gttccatctccaatgcccttttcacc 137

---

>dbj|AK073729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033054B21, full
           insert sequence
          Length = 853

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 122/146 (83%)
 Strand = Plus / Minus

                                                                       
Query: 482 tcacagaacagcttcaattgatagattcgtccctcatgaacagtattgggtggaccaata 541
           ||||||||||||||||  || ||||| || || ||||| ||| ||||  |||||||||| 
Sbjct: 333 tcacagaacagcttcagctggtagatgcgaccttcatggacactattatgtggaccaatg 274

                                                                       
Query: 542 atagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatagctcaca 601
           || || || ||||| || ||||| || |||||||| ||||||||||| ||||||||||| 
Sbjct: 273 atggtgccagtccaagaccgcatgtagatgtcatctgcatcatccattccatagctcacg 214

                                     
Query: 602 gttccatcaccaatgcctttctcacc 627
           |||||||| |||||||| || |||||
Sbjct: 213 gttccatctccaatgcccttttcacc 188

---

>gb|AC007017.4| Arabidopsis thaliana chromosome 2 clone F11F19 map g6825, complete
             sequence
          Length = 120938

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 81/92 (88%)
 Strand = Plus / Minus

                                                                         
Query: 533   ggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatccca 592
             ||||| || ||||| || ||||| ||||||||||| ||||||||  |||||||||| |||
Sbjct: 13543 ggaccgatgatagtgccagtccaagagcgcatataaatgtcatctccatcatccattcca 13484

                                             
Query: 593   tagctcacagttccatcaccaatgcctttctc 624
             ||||||||||||||||| ||||| ||||||||
Sbjct: 13483 tagctcacagttccatctccaatacctttctc 13452

---

>gb|DQ160040.1| Taraxacum officinale TO38-23 (To38-23) mRNA, partial cds
          Length = 475

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 137/167 (82%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           ||||| |||||||| || || || || || |||||| | ||||| || ||||||||||| 
Sbjct: 235 tggaaacggacagttggaggcttctcagggtaatctttgtcacaaaatagcttcaattgg 176

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           ||||| || |||||||| |||| |||| | || || || || || |||||||| || |||
Sbjct: 175 tagatgcgaccctcatgcacagaattgtgagggccgatgatggtgcctgtccatgatcgc 116

                                                          
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatc 609
           ||||| || |||||| |||||||||| |||||||||||||| |||||
Sbjct: 115 atatagatatcatcaccatcatccattccatagctcacagtgccatc 69

---

>gb|BT013203.1| Lycopersicon esculentum clone 134376R, mRNA sequence
          Length = 843

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 121/146 (82%)
 Strand = Plus / Minus

                                                                       
Query: 500 tgatagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggag 559
           |||||||| || || || || |||||||| || || ||||| |||||||||||||| || 
Sbjct: 335 tgatagatgcgcccttcgtgtacagtattaggagggccaatgatagttcctgtccatgac 276

                                                                       
Query: 560 cgcatatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcct 619
            |||| || | |||||| |||||||||||||||||||| ||||||||||| || || |||
Sbjct: 275 tgcatgtacacgtcatctgcatcatccatcccatagctgacagttccatcccctattcct 216

                                     
Query: 620 ttctcacctctctcaagttcttccaa 645
           || || ||||| ||||| || |||||
Sbjct: 215 ttttctcctctttcaagctcctccaa 190

---

>gb|AC150979.15| Medicago truncatula clone mth2-115a17, complete sequence
          Length = 152779

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                          
Query: 536    ccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatag 595
              ||||||||||| || ||||| ||  ||||  |||| |||||||| |||||||| ||||||
Sbjct: 105445 ccaataatagtcccagtccatgactgcatgaatatatcatcagcgtcatccattccatag 105504

                                                                
Query: 596    ctcacagttccatcaccaatgcctttctcacctctctcaagttcttccaa 645
              || ||||||||||| ||||| || |||||||||| |||||| ||||||||
Sbjct: 105505 ctaacagttccatctccaattcccttctcacctcgctcaagctcttccaa 105554



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                          
Query: 458    ggtggtttgtctggataatctgtatcacagaacagcttcaattgatagattcgtccctca 517
              ||||| ||||||||||||||  |  |||| |||| |||||| || ||||| || || |||
Sbjct: 104020 ggtggattgtctggataatccttgccacaaaacaacttcaactggtagatacgaccttca 104079

                      
Query: 518    tgaacagt 525
              ||||||||
Sbjct: 104080 tgaacagt 104087

---

>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence
          Length = 120870

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                        
Query: 536  ccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatag 595
            ||||||||||| || ||||| ||  ||||  |||| |||||||| |||||||| ||||||
Sbjct: 2777 ccaataatagtcccagtccatgactgcatgaatatatcatcagcgtcatccattccatag 2836

                                                              
Query: 596  ctcacagttccatcaccaatgcctttctcacctctctcaagttcttccaa 645
            || ||||||||||| ||||| || |||||||||| |||||| ||||||||
Sbjct: 2837 ctaacagttccatctccaattcccttctcacctcgctcaagctcttccaa 2886



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                        
Query: 458  ggtggtttgtctggataatctgtatcacagaacagcttcaattgatagattcgtccctca 517
            ||||| ||||||||||||||  |  |||| |||| |||||| || ||||| || || |||
Sbjct: 1352 ggtggattgtctggataatccttgccacaaaacaacttcaactggtagatacgaccttca 1411

                    
Query: 518  tgaacagt 525
            ||||||||
Sbjct: 1412 tgaacagt 1419

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                            
Query: 533      ggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatccca 592
                ||||||||||| || |||||||| |||||||| || || || || ||||||||||| |||
Sbjct: 25593240 ggaccaataattgtgcctgtccaagagcgcatgtagatatcgtctgcatcatccattcca 25593299

                                                                  
Query: 593      tagctcacagttccatcaccaatgcctttctcacctctctcaagttcttc 642
                ||||| || | ||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 25593300 tagcttactgatccatcaccgatgcccttctcccctctctcaagctcttc 25593349

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Plus

                                                                            
Query: 533      ggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatccca 592
                ||||||||||| || |||||||| |||||||| || || || || ||||||||||| |||
Sbjct: 25521416 ggaccaataattgtgcctgtccaagagcgcatgtagatatcgtctgcatcatccattcca 25521475

                                                                  
Query: 593      tagctcacagttccatcaccaatgcctttctcacctctctcaagttcttc 642
                ||||| || | ||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 25521476 tagcttactgatccatcaccgatgcccttctcccctctctcaagctcttc 25521525

---

>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 127003

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                         
Query: 533   ggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatccca 592
             ||||||||||| || |||||||| |||||||| || || || || ||||||||||| |||
Sbjct: 80478 ggaccaataattgtgcctgtccaagagcgcatgtagatatcgtctgcatcatccattcca 80419

                                                               
Query: 593   tagctcacagttccatcaccaatgcctttctcacctctctcaagttcttc 642
             ||||| || | ||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 80418 tagcttactgatccatcaccgatgcccttctcccctctctcaagctcttc 80369

---

>dbj|AP004536.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15N19, TM0097b,
             complete sequence
          Length = 78574

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 91/107 (85%)
 Strand = Plus / Plus

                                                                         
Query: 539   ataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatagctc 598
             ||||| ||||| ||||| ||  |||| ||||| |||||||| || ||||| |||||||| 
Sbjct: 75052 ataattgttccagtccatgactgcatgtatatatcatcagcgtcgtccattccatagctt 75111

                                                            
Query: 599   acagttccatcaccaatgcctttctcacctctctcaagttcttccaa 645
             ||||||||||| ||||| || |||||||||| |||||| ||||||||
Sbjct: 75112 acagttccatctccaattcccttctcacctcgctcaagctcttccaa 75158

---

>gb|DQ235194.1| Solanum tuberosum clone 168B03 ubiquitin-conjugating enzyme family
           protein-like mRNA, complete cds
          Length = 682

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           ||||| |||||| | ||||| || || ||||||||  | || ||||| |||||||| |||
Sbjct: 359 tggaaacggacacttggtggcttctccggataatccttgtcgcagaatagcttcaactga 300

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           || || || || ||||| |||| |||| | ||||||||||| || || ||||| || |||
Sbjct: 299 taaatgcggccttcatgcacagaattgtgaggaccaataatggtgccagtccaagaacgc 240

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| || |||||  |||||||||| ||||||||||| || ||||| ||||| || |||
Sbjct: 239 atataaatatcatctccatcatccataccatagctcactgtcccatctccaatacccttc 180

             
Query: 623 tc 624
           ||
Sbjct: 179 tc 178

---

>gb|DQ191643.1| Solanum tuberosum ubiquitin-conjugating enzyme family protein-like
           protein mRNA, complete cds
          Length = 764

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 147/182 (80%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           ||||| |||||| | ||||| || || ||||||||  | || ||||| |||||||| |||
Sbjct: 351 tggaaacggacacttggtggcttctccggataatccttgtcgcagaatagcttcaactga 292

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           || || || || ||||| |||| |||| | ||||||||||| || || ||||| || |||
Sbjct: 291 taaatgcggccttcatgcacagaattgtgaggaccaataatggtgccagtccaagaacgc 232

                                                                       
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatcaccaatgcctttc 622
           ||||| || |||||  |||||||||| ||||||||||| || ||||| ||||| || |||
Sbjct: 231 atataaatatcatctccatcatccataccatagctcactgtcccatctccaatacccttc 172

             
Query: 623 tc 624
           ||
Sbjct: 171 tc 170

---

>emb|AL353912.1|ATF3C22 Arabidopsis thaliana DNA chromosome 3, BAC clone F3C22
          Length = 100028

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                         
Query: 551   gtccaggagcgcatatatatgtcatcagcatcatccatcccatagctcacagttccatca 610
             ||||| || |||||||| ||||||||  |||||||||| |||||||||||||||||||| 
Sbjct: 15774 gtccaagaacgcatatagatgtcatctccatcatccattccatagctcacagttccatcc 15833

                           
Query: 611   ccaatgcctttctc 624
             ||||| ||||||||
Sbjct: 15834 ccaatacctttctc 15847



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                         
Query: 443   tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
             ||||| |||||||| || ||||| || || |||||| | ||||| || |||||||| |||
Sbjct: 15426 tggaatcggacagttggaggtttctccgggtaatctttgtcacaaaagagcttcaactga 15485

                                    
Query: 503   tagattcgtccctcatgaacagt 525
             |||||||  || |||||||||||
Sbjct: 15486 tagattctaccttcatgaacagt 15508

---

>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6
          Length = 93443

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                         
Query: 551   gtccaggagcgcatatatatgtcatcagcatcatccatcccatagctcacagttccatca 610
             ||||| || |||||||| ||||||||  |||||||||| |||||||||||||||||||| 
Sbjct: 77491 gtccaagaacgcatatagatgtcatctccatcatccattccatagctcacagttccatcc 77550

                           
Query: 611   ccaatgcctttctc 624
             ||||| ||||||||
Sbjct: 77551 ccaatacctttctc 77564



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                         
Query: 443   tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
             ||||| |||||||| || ||||| || || |||||| | ||||| || |||||||| |||
Sbjct: 77143 tggaatcggacagttggaggtttctccgggtaatctttgtcacaaaagagcttcaactga 77202

                                    
Query: 503   tagattcgtccctcatgaacagt 525
             |||||||  || |||||||||||
Sbjct: 77203 tagattctaccttcatgaacagt 77225

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                           
Query: 531     gtggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcc 590
               |||||||||| || || || ||||| || ||||| || |||||||| ||||||||||| |
Sbjct: 7152073 gtggaccaatgatggtgccagtccaagaccgcatgtagatgtcatctgcatcatccattc 7152132

                                                    
Query: 591     catagctcacagttccatcaccaatgcctttctcacc 627
               |||||||||| |||||||| |||||||| || |||||
Sbjct: 7152133 catagctcacggttccatctccaatgcccttttcacc 7152169

---

>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1381_H04
          Length = 130961

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                        
Query: 531  gtggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcc 590
            |||||||||| || || || ||||| || ||||| || |||||||| ||||||||||| |
Sbjct: 4178 gtggaccaatgatggtgccagtccaagaccgcatgtagatgtcatctgcatcatccattc 4237

                                                 
Query: 591  catagctcacagttccatcaccaatgcctttctcacc 627
            |||||||||| |||||||| |||||||| || |||||
Sbjct: 4238 catagctcacggttccatctccaatgcccttttcacc 4274

---

>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0592C05
          Length = 150478

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                          
Query: 531    gtggaccaataatagttcctgtccaggagcgcatatatatgtcatcagcatcatccatcc 590
              |||||||||| || || || ||||| || ||||| || |||||||| ||||||||||| |
Sbjct: 104152 gtggaccaatgatggtgccagtccaagaccgcatgtagatgtcatctgcatcatccattc 104211

                                                   
Query: 591    catagctcacagttccatcaccaatgcctttctcacc 627
              |||||||||| |||||||| |||||||| || |||||
Sbjct: 104212 catagctcacggttccatctccaatgcccttttcacc 104248

---

>gb|BT016303.1| Zea mays clone Contig136 mRNA sequence
          Length = 790

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 115/140 (82%)
 Strand = Plus / Minus

                                                                       
Query: 485 cagaacagcttcaattgatagattcgtccctcatgaacagtattgggtggaccaataata 544
           ||||||| |||||  || ||||| || |||||||| || |||||  | || |||||||||
Sbjct: 294 cagaacaacttcagctggtagatgcgaccctcatggacggtattatgagggccaataata 235

                                                                       
Query: 545 gttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatagctcacagtt 604
           || || ||||| || ||||| || |||||||| || |||||||| ||||||||||| || 
Sbjct: 234 gtgccagtccatgatcgcatgtagatgtcatctgcgtcatccattccatagctcactgtc 175

                               
Query: 605 ccatcaccaatgcctttctc 624
           ||||| |||||||| |||||
Sbjct: 174 ccatctccaatgcccttctc 155

---

>gb|AY103581.1| Zea mays PCO136340 mRNA sequence
          Length = 1242

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 115/140 (82%)
 Strand = Plus / Minus

                                                                       
Query: 485 cagaacagcttcaattgatagattcgtccctcatgaacagtattgggtggaccaataata 544
           ||||||| |||||  || ||||| || |||||||| || |||||  | || |||||||||
Sbjct: 380 cagaacaacttcagctggtagatgcgaccctcatggacggtattatgagggccaataata 321

                                                                       
Query: 545 gttcctgtccaggagcgcatatatatgtcatcagcatcatccatcccatagctcacagtt 604
           || || ||||| || ||||| || |||||||| || |||||||| ||||||||||| || 
Sbjct: 320 gtgccagtccatgatcgcatgtagatgtcatctgcgtcatccattccatagctcactgtc 261

                               
Query: 605 ccatcaccaatgcctttctc 624
           ||||| |||||||| |||||
Sbjct: 260 ccatctccaatgcccttctc 241

---

>gb|DQ160024.1| Taraxacum officinale TO25-123 (To25-123) mRNA, partial cds
          Length = 203

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 133/167 (79%)
 Strand = Plus / Minus

                                                                       
Query: 443 tggaaccggacagtcggtggtttgtctggataatctgtatcacagaacagcttcaattga 502
           ||||| |||||||| || || || |||||||||||| | ||||| |||||||||| ||||
Sbjct: 192 tggaaacggacagttggaggcttttctggataatctttgtcacaaaacagcttcagttga 133

                                                                       
Query: 503 tagattcgtccctcatgaacagtattgggtggaccaataatagttcctgtccaggagcgc 562
           || || || || || || ||||  ||| | |||||||| || || || ||||| || |||
Sbjct: 132 taaatgcgaccttcgtgtacagagttgtgaggaccaatgatggtgccagtccatgaacgc 73

                                                          
Query: 563 atatatatgtcatcagcatcatccatcccatagctcacagttccatc 609
           || || ||||| ||  |||||||||| ||||| ||||| || |||||
Sbjct: 72  atgtaaatgtcgtcgccatcatccattccataactcactgtgccatc 26

---

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 269     ttgccttcatggggctggtggag 291
               |||||||||||||||||||||||
Sbjct: 1697655 ttgccttcatggggctggtggag 1697677

---

>gb|AC122214.4| Mus musculus BAC clone RP23-104J10 from chromosome 7, complete sequence
          Length = 176054

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 342    cctccattgtatgttcccttt 362
              |||||||||||||||||||||
Sbjct: 129286 cctccattgtatgttcccttt 129266

---

>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence
          Length = 207406

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 240   gccctttctgctccactctc 259
             ||||||||||||||||||||
Sbjct: 52366 gccctttctgctccactctc 52385

---

>gb|AC150858.4| Bos taurus  BAC CH240-431L22 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 166138

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     tgatattgctaaatgagggg 28
             ||||||||||||||||||||
Sbjct: 35507 tgatattgctaaatgagggg 35526

---

>gb|AY810971.1| Schistosoma japonicum SJCHGC06791 protein mRNA, partial cds
          Length = 970

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 8   ttgatattgctaaatgaggggtaaaaggttac 39
           ||||||||||||||||| ||||  ||||||||
Sbjct: 559 ttgatattgctaaatgatgggttcaaggttac 528

---

>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete
              sequence
          Length = 3214944

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 459    gtggtttgtctggataatct 478
              ||||||||||||||||||||
Sbjct: 164598 gtggtttgtctggataatct 164579

---

>ref|XM_778081.1| PREDICTED: Strongylocentrotus purpuratus similar to M-phase
            phosphoprotein, mpp8 (LOC577876), mRNA
          Length = 2502

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 607  atcaccaatgcctttctcac 626
            ||||||||||||||||||||
Sbjct: 1251 atcaccaatgcctttctcac 1232

---

>gb|AF401037.1| Lactobacillus sakei phosphoribosylpyrophosphate amidotransferase
            (purF) gene, partial cds; phosphoribosyl-aminoimidazole
            synthetase (purM) gene, complete cds; and
            phosphoribosylglycinamide formyltransferase (purN) gene,
            partial cds
          Length = 2299

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  gactagcaactgtcaaatta 133
            ||||||||||||||||||||
Sbjct: 1471 gactagcaactgtcaaatta 1452

---

>gb|AC098864.3| Homo sapiens BAC clone RP11-359L10 from 4, complete sequence
          Length = 216280

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      atggctcttgatattgctaaatga 24
              ||||||||||||||||| ||||||
Sbjct: 132896 atggctcttgatattgccaaatga 132873

---

>emb|BX323874.4| Zebrafish DNA sequence from clone DKEY-104N21 in linkage group 16,
             complete sequence
          Length = 256605

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   atgatttcctcctgggtttc 154
             ||||||||||||||||||||
Sbjct: 88994 atgatttcctcctgggtttc 88975

---

>emb|BX571853.4| Zebrafish DNA sequence from clone DKEY-29H14 in linkage group 16,
             complete sequence
          Length = 191052

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   atgatttcctcctgggtttc 154
             ||||||||||||||||||||
Sbjct: 94256 atgatttcctcctgggtttc 94237

---

>dbj|AK080940.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
            enriched library, clone:B430214H24 product:nuclear factor
            I/X, full insert sequence
          Length = 2751

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 240  gccctttctgctccactctc 259
            ||||||||||||||||||||
Sbjct: 1182 gccctttctgctccactctc 1163

---

>gb|AC079811.6| Homo sapiens BAC clone CTD-2502L6 from 2, complete sequence
          Length = 130618

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   tgctagccctttctgctcca 254
             ||||||||||||||||||||
Sbjct: 27830 tgctagccctttctgctcca 27811

---

>emb|BX001066.14| Mouse DNA sequence from clone RP23-463P1 on chromosome 4, complete
              sequence
          Length = 195216

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     acaccactgtgcaaactgaa 57
              ||||||||||||||||||||
Sbjct: 129690 acaccactgtgcaaactgaa 129671

---

>gb|AC006963.4|AC006963 Homo sapiens PAC clone RP1-278D1 from X, complete sequence
          Length = 88215

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   tccattgtatgttccctttg 363
             ||||||||||||||||||||
Sbjct: 14515 tccattgtatgttccctttg 14496

---

>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    gactagcaactgtcaaatta 133
              ||||||||||||||||||||
Sbjct: 665403 gactagcaactgtcaaatta 665384

---

>dbj|AK114407.1| Ciona intestinalis cDNA, clone:cieg001f08, full insert sequence
          Length = 1767

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 597 tcacagttccatcaccaatg 616
           ||||||||||||||||||||
Sbjct: 288 tcacagttccatcaccaatg 269

---

>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 386    cttcttggatcaaccattcc 405
              ||||||||||||||||||||
Sbjct: 770242 cttcttggatcaaccattcc 770223

---

>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 634    aagttcttccaaaagtctaa 653
              ||||||||||||||||||||
Sbjct: 627116 aagttcttccaaaagtctaa 627097

---

>emb|AL772344.4| Mouse DNA sequence from clone RP23-235J15 on chromosome 4, complete
             sequence
          Length = 223771

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    acaccactgtgcaaactgaa 57
             ||||||||||||||||||||
Sbjct: 65717 acaccactgtgcaaactgaa 65698

---

>emb|AL671977.8| Mouse DNA sequence from clone RP23-171A16 on chromosome X, complete
              sequence
          Length = 193108

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 47     tgcaaactgaataacgaagtcatt 70
              |||||||||||||| |||||||||
Sbjct: 186888 tgcaaactgaataaagaagtcatt 186911

---

>gb|AC145556.4| Mus musculus BAC clone RP23-308E7 from chromosome 8, complete sequence
          Length = 178400

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 240    gccctttctgctccactctc 259
              ||||||||||||||||||||
Sbjct: 178072 gccctttctgctccactctc 178091


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,457,721
Number of Sequences: 3902068
Number of extensions: 6457721
Number of successful extensions: 130331
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 129900
Number of HSP's gapped (non-prelim): 424
length of query: 679
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 656
effective length of database: 17,143,297,704
effective search space: 11246003293824
effective search space used: 11246003293824
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---