>VMSA_HPBGS (P03144) Major surface antigen precursor|
          Length = 428

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 227 YSKILHN*KTLXWGLPSLNL*DGLPHCTAENLR 325
           ++KIL   ++L W   SL+   G+P CT +NL+
Sbjct: 226 WTKILTIAQSLDWWWTSLSFPGGIPECTGQNLQ 258

>TIM13_YEAST (P53299) Mitochondrial import inner membrane translocase subunit|
           TIM13
          Length = 105

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 8/38 (21%)
 Frame = -2

Query: 179 FESCLTS------DACVLGCLDSYLLCWTL--NTYLNR 90
           FE CLTS      DAC+  CL  Y+  W +    Y++R
Sbjct: 58  FEKCLTSPYATRNDACIDQCLAKYMRSWNVISKAYISR 95

>DMC1_LILLO (P37384) Meiotic recombination protein DMC1 homolog|
          Length = 349

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 18/63 (28%), Positives = 29/63 (46%)
 Frame = +2

Query: 5   TTG*QLQVYSEFTGTGLSSIQRTTTYGQFY*GKCLVSNTANRNPDILRHMHRSSNMTQII 184
           TTG   Q   E  G G+ ++Q T  +G+F  GK  +++T   +  +   MH  +     I
Sbjct: 114 TTG--SQALDELLGGGIETLQITEAFGEFRSGKTQIAHTLCVSTQLPVSMHGGNGKVAYI 171

Query: 185 HIE 193
             E
Sbjct: 172 DTE 174

>IL20_MOUSE (Q9JKV9) Interleukin-20 precursor (IL-20) (Four alpha helix|
           cytokine ZCYTO10)
          Length = 176

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
 Frame = +3

Query: 6   LQADNCKFTASLQA---QVSRAYKGRQLMDSSIEVSV*CPTQQIGIQTS*DTCIARQT*L 176
           L   +C  TA+LQA   + S      Q  D++I++ +   T+ +    S D C   +  +
Sbjct: 28  LHLGSCVITANLQAIQKEFSEIRDSVQAEDTNIDIRILRTTESLKDIKSLDRCCFLRHLV 87

Query: 177 KLYTSRSSEGYRNAXGHTVK 236
           + Y  R  + Y+    HT++
Sbjct: 88  RFYLDRVFKVYQTPDHHTLR 107

>HIF1A_XENLA (Q9I8A9) Hypoxia-inducible factor 1 alpha (HIF-1 alpha) (HIF1|
           alpha)
          Length = 805

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 238 FAQLKNIXVGSALPQPLGWTTTLHRRKLTDSS 333
           F QL ++   S++PQ LG  TTL  + L+ S+
Sbjct: 573 FDQLSSLECDSSIPQTLGSMTTLFHQSLSPST 604

>VMSA_WHV2 (P06432) Major surface antigen precursor|
          Length = 431

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 227 YSKILHN*KTLXWGLPSLNL*DGLPHCTAEN 319
           ++KIL   + L W   SL+   G+P CT +N
Sbjct: 229 WTKILTIAQNLDWWCTSLSFPGGIPECTGQN 259

>DSVA_DESVH (P45574) Sulfite reductase, dissimilatory-type alpha subunit (EC|
           1.8.99.3) (Desulfoviridin alpha subunit)
           (Hydrogensulfite reductase alpha subunit)
          Length = 436

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/33 (33%), Positives = 14/33 (42%)
 Frame = -2

Query: 176 ESCLTSDACVLGCLDSYLLCWTLNTYLNRTVHK 78
           ESCL    C   C DS   C+ L       +H+
Sbjct: 174 ESCLGKSRCEFACYDSQAACYELTMEYQDELHR 206

>POLN_MANCV (Q69014) Non-structural polyprotein [Contains: p16; p23; Helicase|
            (2C-like protein) (P2C); 3A-like protein; Viral
            genome-linked protein (VPg); Thiol protease P3C (EC
            3.4.22.-) (3C-like protease) (3C-pro); RNA-directed RNA
            polymerase (EC 2.7.7.
          Length = 2208

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +1

Query: 148  THASLVKHDSNYTHRDLLKGIGTXXDIQ*NFAQLKNIXVGSALPQPLGWTTTLH 309
            TH +    + N +   + + +G    +Q  F+QL ++ +GS    P+ +TT LH
Sbjct: 1011 THVASTSDEVNGSAFKITRTVGETTWVQGPFSQLPHMQIGSG--SPVYFTTRLH 1062


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,243,718
Number of Sequences: 219361
Number of extensions: 912301
Number of successful extensions: 1577
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1576
length of database: 80,573,946
effective HSP length: 92
effective length of database: 60,392,734
effective search space used: 1449425616
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)