ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24c14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK121561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 377 e-101
2dbj|AK064873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 377 e-101
3dbj|AK062113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 4e-97
4gb|AY104067.1| Zea mays PCO067553 mRNA sequence 315 8e-83
5gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno... 224 2e-55
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 224 2e-55
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
8gb|DQ364231.1| Ginkgo biloba 1-hydroxy-2-methyl-2-(E)-butenyl 4-... 90 9e-15
9gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 52 0.002
10gb|DQ366744.1| Uncultured Prochlorococcus marinus clone HOT0M-8G... 50 0.008
11gb|AY433790.1| Pyrus communis LYTB-like protein mRNA, complete s... 46 0.12
12gb|AY347830.1| Malus x domestica clone 30-6 LYTB-like protein mR... 46 0.12
13gb|AY518540.1| Homo sapiens CDC5 cell division cycle 5-like (S. ... 44 0.47
14emb|AL353588.25| Human DNA sequence from clone RP11-444E17 on ch... 44 0.47
15emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se... 44 0.47
16gb|AF270978.1|AF270978 Adonis palaestina LYTB-like protein precu... 44 0.47
17gb|AC027702.18| Homo sapiens chromosome 8, clone RP11-108L9, com... 44 0.47
18dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.47
19emb|CR847806.15| Zebrafish DNA sequence from clone CH211-267J10 ... 42 1.9
20gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, comp... 42 1.9
21gb|AC091969.3| Homo sapiens chromosome 5 clone RP11-501F22, comp... 42 1.9
22gb|AC091829.2| Homo sapiens chromosome 5 clone CTD-2021O22, comp... 42 1.9
23gb|AC134788.10| Mus musculus chromosome 1, clone RP24-482A14, co... 42 1.9
24ref|XM_632282.1| Dictyostelium discoideum hypothetical protein (... 40 7.4
25gb|AC007865.8| Trypanosoma brucei chromosome 2 clone RPCI93-30M2... 40 7.4
26gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 7.4
27gb|AC104863.12| Mus musculus chromosome 6, clone RP23-109C11, co... 40 7.4
28gb|DQ269451.2| Stevia rebaudiana IPP/DMAPP synthase (ispH) mRNA,... 40 7.4
29emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4,... 40 7.4
30emb|BX537103.6| Zebrafish DNA sequence from clone CH211-194E1 in... 40 7.4
31gb|AC018680.4|AC018680 Homo sapiens BAC clone RP11-384E2 from 4,... 40 7.4
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
33emb|BX950457.1| Gallus gallus finished cDNA, clone ChEST992n21 40 7.4
34emb|BX890594.1|OSJN00301 Oryza sativa genomic DNA, chromosome 4,... 40 7.4
35gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.4

>dbj|AK121561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034C23, full
            insert sequence
          Length = 1865

 Score =  377 bits (190), Expect = e-101
 Identities = 307/346 (88%)
 Strand = Plus / Minus

                                                                        
Query: 194  cctgcaaaacttcttgacgcttgatctcaaataccttgtgtagcgtatcctcgacaacct 253
            ||||||||||||| || |||||||||||||| ||||| |||| || |||||| |||||||
Sbjct: 1483 cctgcaaaacttcctggcgcttgatctcaaacaccttctgtaacgcatcctcaacaacct 1424

                                                                        
Query: 254  tgtccggagttgaggcaccggaagtaactccaattgtgataggcccttctggtagccagt 313
            |||||||||||||||| || ||||||||||| ||||||||||| |||||||||| |||||
Sbjct: 1423 tgtccggagttgaggcgccagaagtaactccgattgtgatagggccttctggtaaccagt 1364

                                                                        
Query: 314  tttccgcctcaataagctcgccgtgatttagcttgtaggcaatcctgtttcctggtccaa 373
            | ||   ||| | ||||||||| ||||||| |||||||   ||| ||||||| |||||||
Sbjct: 1363 tctctttctcgacaagctcgccatgatttaacttgtagctgatcttgtttccaggtccaa 1304

                                                                        
Query: 374  tcctttgttcactgtcaatccagtaggacggaataccactgagttctccaatttcttgca 433
            ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1303 tcctttgttcactgtcaatccagtaagacggaattccactgagttctccaatttcttgca 1244

                                                                        
Query: 434  aatgagaagtattactggaattccaccctccaatgaccagaataaggtcaaccttttcct 493
            ||||||| || |||||||| ||||| |||||||  ||||||||||| ||||| || ||||
Sbjct: 1243 aatgagaggtgttactggagttccatcctccaacaaccagaataagatcaactttctcct 1184

                                                          
Query: 494  tcactaggtgatacattgcatcttgtctttcctgtgtagcatcaca 539
            ||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 1183 tcactagctggtacattgcatcttgtctttcctgtgtggcatcaca 1138



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>dbj|AK064873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J09, full
            insert sequence
          Length = 1738

 Score =  377 bits (190), Expect = e-101
 Identities = 307/346 (88%)
 Strand = Plus / Minus

                                                                        
Query: 194  cctgcaaaacttcttgacgcttgatctcaaataccttgtgtagcgtatcctcgacaacct 253
            ||||||||||||| || |||||||||||||| ||||| |||| || |||||| |||||||
Sbjct: 1467 cctgcaaaacttcctggcgcttgatctcaaacaccttctgtaacgcatcctcaacaacct 1408

                                                                        
Query: 254  tgtccggagttgaggcaccggaagtaactccaattgtgataggcccttctggtagccagt 313
            |||||||||||||||| || ||||||||||| ||||||||||| |||||||||| |||||
Sbjct: 1407 tgtccggagttgaggcgccagaagtaactccgattgtgatagggccttctggtaaccagt 1348

                                                                        
Query: 314  tttccgcctcaataagctcgccgtgatttagcttgtaggcaatcctgtttcctggtccaa 373
            | ||   ||| | ||||||||| ||||||| |||||||   ||| ||||||| |||||||
Sbjct: 1347 tctctttctcgacaagctcgccatgatttaacttgtagctgatcttgtttccaggtccaa 1288

                                                                        
Query: 374  tcctttgttcactgtcaatccagtaggacggaataccactgagttctccaatttcttgca 433
            ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1287 tcctttgttcactgtcaatccagtaagacggaattccactgagttctccaatttcttgca 1228

                                                                        
Query: 434  aatgagaagtattactggaattccaccctccaatgaccagaataaggtcaaccttttcct 493
            ||||||| || |||||||| ||||| |||||||  ||||||||||| ||||| || ||||
Sbjct: 1227 aatgagaggtgttactggagttccatcctccaacaaccagaataagatcaactttctcct 1168

                                                          
Query: 494  tcactaggtgatacattgcatcttgtctttcctgtgtagcatcaca 539
            ||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 1167 tcactagctggtacattgcatcttgtctttcctgtgtggcatcaca 1122



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>dbj|AK062113.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B12, full
            insert sequence
          Length = 1852

 Score =  363 bits (183), Expect = 4e-97
 Identities = 306/346 (88%), Gaps = 2/346 (0%)
 Strand = Plus / Minus

                                                                        
Query: 194  cctgcaaaacttcttgacgcttgatctcaaataccttgtgtagcgtatcctcgacaacct 253
            ||||||||||||| || |||||||||||||| ||||| |||| || |||||| |||||||
Sbjct: 1442 cctgcaaaacttcctggcgcttgatctcaaacaccttctgtaacgcatcctcaacaacct 1383

                                                                        
Query: 254  tgtccggagttgaggcaccggaagtaactccaattgtgataggcccttctggtagccagt 313
            |||||||||||||||| || |||||||||||  |||||||||| |||||||||| |||||
Sbjct: 1382 tgtccggagttgaggcgccagaagtaactcc--ttgtgatagggccttctggtaaccagt 1325

                                                                        
Query: 314  tttccgcctcaataagctcgccgtgatttagcttgtaggcaatcctgtttcctggtccaa 373
            | ||   ||| | ||||||||| ||||||| |||||||   ||| ||||||| |||||||
Sbjct: 1324 tctctttctcgacaagctcgccatgatttaacttgtagctgatcttgtttccaggtccaa 1265

                                                                        
Query: 374  tcctttgttcactgtcaatccagtaggacggaataccactgagttctccaatttcttgca 433
            ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 1264 tcctttgttcactgtcaatccagtaagacggaattccactgagttctccaatttcttgca 1205

                                                                        
Query: 434  aatgagaagtattactggaattccaccctccaatgaccagaataaggtcaaccttttcct 493
            ||||||| || |||||||| ||||| |||||||  ||||||||||| ||||| || ||||
Sbjct: 1204 aatgagaggtgttactggagttccatcctccaacaaccagaataagatcaactttctcct 1145

                                                          
Query: 494  tcactaggtgatacattgcatcttgtctttcctgtgtagcatcaca 539
            ||||||| || |||||||||||||||||||||||||| ||||||||
Sbjct: 1144 tcactagctggtacattgcatcttgtctttcctgtgtggcatcaca 1099



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>gb|AY104067.1| Zea mays PCO067553 mRNA sequence
          Length = 839

 Score =  315 bits (159), Expect = 8e-83
 Identities = 312/363 (85%)
 Strand = Plus / Minus

                                                                       
Query: 181 aaaatctatgcaacctgcaaaacttcttgacgcttgatctcaaataccttgtgtagcgta 240
           ||||| |||||||||||||||| ||| ||||||||||||||||||||||| || || | |
Sbjct: 838 aaaatttatgcaacctgcaaaatttcctgacgcttgatctcaaataccttctgaagagca 779

                                                                       
Query: 241 tcctcgacaaccttgtccggagttgaggcaccggaagtaactccaattgtgataggccct 300
           ||||| |||||||| || |||||||||||||| |||||||| ||||| || |||||||| 
Sbjct: 778 tcctcaacaaccttatctggagttgaggcacctgaagtaacaccaatggtaataggcccc 719

                                                                       
Query: 301 tctggtagccagttttccgcctcaataagctcgccgtgatttagcttgtaggcaatcctg 360
           || |||| |||||| |    |||||  || || || ||||||| |||||||   ||||||
Sbjct: 718 tcgggtaaccagttatttttctcaaccagttcaccatgatttaacttgtagctgatcctg 659

                                                                       
Query: 361 tttcctggtccaatcctttgttcactgtcaatccagtaggacggaataccactgagttct 420
           |||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct: 658 tttcctggtccaatcctttgttcactgtcaatccagtatgatggaattccactgagttct 599

                                                                       
Query: 421 ccaatttcttgcaaatgagaagtattactggaattccaccctccaatgaccagaataagg 480
           || |||||||||| |||||| || ||||| |||||||| |||||||  || |||||||||
Sbjct: 598 ccgatttcttgcagatgagaggtgttacttgaattccatcctccaacaacaagaataagg 539

                                                                       
Query: 481 tcaaccttttccttcactaggtgatacattgcatcttgtctttcctgtgtagcatcacaa 540
           ||||| || || ||||| || |||||||| ||||||||||||||||| || |||||||||
Sbjct: 538 tcaactttctctttcaccagctgatacatagcatcttgtctttcctgagtggcatcacaa 479

              
Query: 541 ata 543
           |||
Sbjct: 478 ata 476



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>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete
              sequence
          Length = 163712

 Score =  224 bits (113), Expect = 2e-55
 Identities = 155/169 (91%)
 Strand = Plus / Minus

                                                                          
Query: 359    tgtttcctggtccaatcctttgttcactgtcaatccagtaggacggaataccactgagtt 418
              ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 112165 tgtttccaggtccaatcctttgttcactgtcaatccagtaagacggaattccactgagtt 112106

                                                                          
Query: 419    ctccaatttcttgcaaatgagaagtattactggaattccaccctccaatgaccagaataa 478
              |||||||||||||||||||||| || |||||||| ||||| |||||||  ||||||||||
Sbjct: 112105 ctccaatttcttgcaaatgagaggtgttactggagttccatcctccaacaaccagaataa 112046

                                                               
Query: 479    ggtcaaccttttccttcactaggtgatacattgcatcttgtctttcctg 527
              | ||||| || ||||||||||| || |||||||||||||||||||||||
Sbjct: 112045 gatcaactttctccttcactagctggtacattgcatcttgtctttcctg 111997



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 107/127 (84%)
 Strand = Plus / Minus

                                                                          
Query: 359    tgtttcctggtccaatcctttgttcactgtcaatccagtaggacggaataccactgagtt 418
              |||| ||||| |||||||| || ||||  || | ||||||||| ||||| ||||||||||
Sbjct: 105996 tgttccctggcccaatcctctgctcaccatcgacccagtaggaaggaatgccactgagtt 105937

                                                                          
Query: 419    ctccaatttcttgcaaatgagaagtattactggaattccaccctccaatgaccagaataa 478
              ||||||||||||||||||| || || |||||||| ||||| ||||| | ||| || || |
Sbjct: 105936 ctccaatttcttgcaaatgggaggtgttactggagttccatcctccgacgacaagtatga 105877

                     
Query: 479    ggtcaac 485
              |||||||
Sbjct: 105876 ggtcaac 105870



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                          
Query: 250    accttgtccggagttgaggcaccggaagtaactccaattgtgataggcccttctggtagc 309
              |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||| |
Sbjct: 112459 accttgtccggagttgaggcgccagaagtaactccgattgtgatagggccttctggtaac 112400

                   
Query: 310    cagtt 314
              |||||
Sbjct: 112399 cagtt 112395



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                          
Query: 194    cctgcaaaacttcttgacgcttgatctcaaataccttgtgtagcgtatcctcgacaacct 253
              ||||||||||||| || |||||||||||||| ||||| |||| || |||||| |||||||
Sbjct: 112636 cctgcaaaacttcctggcgcttgatctcaaacaccttctgtaacgcatcctcaacaacct 112577



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 250    accttgtccggagttgaggcaccggaagtaactccaattgtgat 293
              |||||||| ||||| ||||| || || || ||||||||||||||
Sbjct: 106466 accttgtctggagtagaggctccagaggtgactccaattgtgat 106423



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  224 bits (113), Expect = 2e-55
 Identities = 155/169 (91%)
 Strand = Plus / Plus

                                                                            
Query: 359      tgtttcctggtccaatcctttgttcactgtcaatccagtaggacggaataccactgagtt 418
                ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 29659212 tgtttccaggtccaatcctttgttcactgtcaatccagtaagacggaattccactgagtt 29659271

                                                                            
Query: 419      ctccaatttcttgcaaatgagaagtattactggaattccaccctccaatgaccagaataa 478
                |||||||||||||||||||||| || |||||||| ||||| |||||||  ||||||||||
Sbjct: 29659272 ctccaatttcttgcaaatgagaggtgttactggagttccatcctccaacaaccagaataa 29659331

                                                                 
Query: 479      ggtcaaccttttccttcactaggtgatacattgcatcttgtctttcctg 527
                | ||||| || ||||||||||| || |||||||||||||||||||||||
Sbjct: 29659332 gatcaactttctccttcactagctggtacattgcatcttgtctttcctg 29659380



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 107/127 (84%)
 Strand = Plus / Plus

                                                                            
Query: 359      tgtttcctggtccaatcctttgttcactgtcaatccagtaggacggaataccactgagtt 418
                |||| ||||| |||||||| || ||||  || | ||||||||| ||||| ||||||||||
Sbjct: 29665381 tgttccctggcccaatcctctgctcaccatcgacccagtaggaaggaatgccactgagtt 29665440

                                                                            
Query: 419      ctccaatttcttgcaaatgagaagtattactggaattccaccctccaatgaccagaataa 478
                ||||||||||||||||||| || || |||||||| ||||| ||||| | ||| || || |
Sbjct: 29665441 ctccaatttcttgcaaatgggaggtgttactggagttccatcctccgacgacaagtatga 29665500

                       
Query: 479      ggtcaac 485
                |||||||
Sbjct: 29665501 ggtcaac 29665507



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                            
Query: 250      accttgtccggagttgaggcaccggaagtaactccaattgtgataggcccttctggtagc 309
                |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||| |
Sbjct: 29658918 accttgtccggagttgaggcgccagaagtaactccgattgtgatagggccttctggtaac 29658977

                     
Query: 310      cagtt 314
                |||||
Sbjct: 29658978 cagtt 29658982



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 194      cctgcaaaacttcttgacgcttgatctcaaataccttgtgtagcgtatcctcgacaacct 253
                ||||||||||||| || |||||||||||||| ||||| |||| || |||||| |||||||
Sbjct: 29658741 cctgcaaaacttcctggcgcttgatctcaaacaccttctgtaacgcatcctcaacaacct 29658800



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 250      accttgtccggagttgaggcaccggaagtaactccaattgtgat 293
                |||||||| ||||| ||||| || || || ||||||||||||||
Sbjct: 29664911 accttgtctggagtagaggctccagaggtgactccaattgtgat 29664954



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tatgcaacctgcaaaacttc 206
               ||||||||||||||||||||
Sbjct: 2679604 tatgcaacctgcaaaacttc 2679623



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  224 bits (113), Expect = 2e-55
 Identities = 155/169 (91%)
 Strand = Plus / Plus

                                                                            
Query: 359      tgtttcctggtccaatcctttgttcactgtcaatccagtaggacggaataccactgagtt 418
                ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 29750634 tgtttccaggtccaatcctttgttcactgtcaatccagtaagacggaattccactgagtt 29750693

                                                                            
Query: 419      ctccaatttcttgcaaatgagaagtattactggaattccaccctccaatgaccagaataa 478
                |||||||||||||||||||||| || |||||||| ||||| |||||||  ||||||||||
Sbjct: 29750694 ctccaatttcttgcaaatgagaggtgttactggagttccatcctccaacaaccagaataa 29750753

                                                                 
Query: 479      ggtcaaccttttccttcactaggtgatacattgcatcttgtctttcctg 527
                | ||||| || ||||||||||| || |||||||||||||||||||||||
Sbjct: 29750754 gatcaactttctccttcactagctggtacattgcatcttgtctttcctg 29750802



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 107/127 (84%)
 Strand = Plus / Plus

                                                                            
Query: 359      tgtttcctggtccaatcctttgttcactgtcaatccagtaggacggaataccactgagtt 418
                |||| ||||| |||||||| || ||||  || | ||||||||| ||||| ||||||||||
Sbjct: 29756803 tgttccctggcccaatcctctgctcaccatcgacccagtaggaaggaatgccactgagtt 29756862

                                                                            
Query: 419      ctccaatttcttgcaaatgagaagtattactggaattccaccctccaatgaccagaataa 478
                ||||||||||||||||||| || || |||||||| ||||| ||||| | ||| || || |
Sbjct: 29756863 ctccaatttcttgcaaatgggaggtgttactggagttccatcctccgacgacaagtatga 29756922

                       
Query: 479      ggtcaac 485
                |||||||
Sbjct: 29756923 ggtcaac 29756929



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Plus

                                                                            
Query: 250      accttgtccggagttgaggcaccggaagtaactccaattgtgataggcccttctggtagc 309
                |||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||| |
Sbjct: 29750340 accttgtccggagttgaggcgccagaagtaactccgattgtgatagggccttctggtaac 29750399

                     
Query: 310      cagtt 314
                |||||
Sbjct: 29750400 cagtt 29750404



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 194      cctgcaaaacttcttgacgcttgatctcaaataccttgtgtagcgtatcctcgacaacct 253
                ||||||||||||| || |||||||||||||| ||||| |||| || |||||| |||||||
Sbjct: 29750163 cctgcaaaacttcctggcgcttgatctcaaacaccttctgtaacgcatcctcaacaacct 29750222



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                            
Query: 250      accttgtccggagttgaggcaccggaagtaactccaattgtgat 293
                |||||||| ||||| ||||| || || || ||||||||||||||
Sbjct: 29756333 accttgtctggagtagaggctccagaggtgactccaattgtgat 29756376



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 187     tatgcaacctgcaaaacttc 206
               ||||||||||||||||||||
Sbjct: 2679714 tatgcaacctgcaaaacttc 2679733



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>gb|DQ364231.1| Ginkgo biloba 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
            reductase (HDR) mRNA, complete cds
          Length = 1827

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 231/293 (78%)
 Strand = Plus / Minus

                                                                        
Query: 247  acaaccttgtccggagttgaggcaccggaagtaactccaattgtgataggcccttctggt 306
            ||||| ||||| || ||||| ||||| || || || |||||||| |||||||||||||| 
Sbjct: 1392 acaactttgtctggggttgaagcaccagatgtgaccccaattgtaataggcccttctggc 1333

                                                                        
Query: 307  agccagttttccgcctcaataagctcgccgtgatttagcttgtaggcaatcctgtttcct 366
            | |||||| ||   ||| |  ||||| || ||||| | |||||| |||||| | || || 
Sbjct: 1332 aaccagttctctttctccaccagctccccatgattcaacttgtatgcaatcatattccca 1273

                                                                        
Query: 367  ggtccaatcctttgttcactgtcaatccagtaggacggaataccactgagttctccaatt 426
            |||||||| |  |  |||  |||||||||||| || || || ||| | | |||  | || 
Sbjct: 1272 ggtccaatacgctcctcagagtcaatccagtatgaagggattccattcaattcagctatc 1213

                                                                        
Query: 427  tcttgcaaatgagaagtattactggaattccaccctccaatgaccagaataaggtcaacc 486
            |||||||| || || ||||| || || ||||| ||||||||||||| ||| || || | |
Sbjct: 1212 tcttgcaagtgtgatgtattgctagagttccatcctccaatgaccaaaatgagatcgagc 1153

                                                                 
Query: 487  ttttccttcactaggtgatacattgcatcttgtctttcctgtgtagcatcaca 539
            || ||||| ||||| |||| ||||||||||||||||||||| |||||||||||
Sbjct: 1152 ttatcctttactagctgatgcattgcatcttgtctttcctgagtagcatcaca 1100



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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 506    acattgcatcttgtctttcctgtgtagcatcacaaata 543
              ||||||||||||||||||| | ||||||||| ||||||
Sbjct: 288757 acattgcatcttgtctttcttctgtagcatcgcaaata 288720



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>gb|DQ366744.1| Uncultured Prochlorococcus marinus clone HOT0M-8G12 genomic sequence
          Length = 20915

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 506  acattgcatcttgtctttcctgtgtagcatcacaaat 542
            ||||||||||||||||||| | ||| |||||||||||
Sbjct: 3928 acattgcatcttgtctttcttctgttgcatcacaaat 3892



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>gb|AY433790.1| Pyrus communis LYTB-like protein mRNA, complete sequence
          Length = 246

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 98/123 (79%)
 Strand = Plus / Minus

                                                                       
Query: 417 ttctccaatttcttgcaaatgagaagtattactggaattccaccctccaatgaccagaat 476
           |||| |||||||||| |  ||||| || ||||| || |||||||| |||||||| |  | 
Sbjct: 239 ttctgcaatttcttgtaggtgagaggtgttactcgagttccacccaccaatgactaacaa 180

                                                                       
Query: 477 aaggtcaaccttttccttcactaggtgatacattgcatcttgtctttcctgtgtagcatc 536
           ||| |||| ||||||||  || || |  ||||||||||||||||  ||||| || |||||
Sbjct: 179 aagatcaagcttttcctcaacaagcttgtacattgcatcttgtcgctcctgagttgcatc 120

              
Query: 537 aca 539
           |||
Sbjct: 119 aca 117



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>gb|AY347830.1| Malus x domestica clone 30-6 LYTB-like protein mRNA, partial cds
          Length = 393

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                       
Query: 247 acaaccttgtccggagttgaggcaccggaagtaactccaattgtgataggcccttctggt 306
           |||||||| || ||||| || || || || || |||||||| |||| ||| |||||||| 
Sbjct: 155 acaaccttatctggagtagatgccccagatgtcactccaatagtgacaggaccttctggc 96

                      
Query: 307 agccagttttc 317
           |||||||||||
Sbjct: 95  agccagttttc 85



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>gb|AY518540.1| Homo sapiens CDC5 cell division cycle 5-like (S. pombe) (CDC5L) gene,
             complete cds
          Length = 63393

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 449   tggaattccaccctccaatgac 470
             ||||||||||||||||||||||
Sbjct: 17026 tggaattccaccctccaatgac 17047



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>emb|AL353588.25| Human DNA sequence from clone RP11-444E17 on chromosome 6 Contains the
              gene for a novel protein (possible ortholog of mouse
              TCTE1), the gene for novel protein (KIAA1270), a novel
              gene, the 5' end of a novel gene (possible ortholog of
              rodent CDC5-like protein), the 3' part of a novel gene and
              three CpG islands, complete sequence
          Length = 145947

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 449    tggaattccaccctccaatgac 470
              ||||||||||||||||||||||
Sbjct: 126006 tggaattccaccctccaatgac 126027



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>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 506    acattgcatcttgtctttcctgtgtagcatcaca 539
              |||| |||||||||||||| | ||||||||||||
Sbjct: 255076 acatcgcatcttgtctttcttctgtagcatcaca 255043



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>gb|AF270978.1|AF270978 Adonis palaestina LYTB-like protein precursor (lytB) mRNA, complete
            cds
          Length = 1599

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 103/130 (79%)
 Strand = Plus / Minus

                                                                        
Query: 283  ccaattgtgataggcccttctggtagccagttttccgcctcaataagctcgccgtgattt 342
            |||||||| | ||| || ||||| ||||||||||| | |||||  ||||| || ||||| 
Sbjct: 1324 ccaattgtaacaggaccctctgggagccagttttcggtctcaactagctcaccatgattc 1265

                                                                        
Query: 343  agcttgtaggcaatcctgtttcctggtccaatcctttgttcactgtcaatccagtaggac 402
            |  |||| |  |||| ||||||||||||| || ||    ||||||||||||||||| || 
Sbjct: 1264 aatttgtggctaatcttgtttcctggtcctattctcgtctcactgtcaatccagtaagaa 1205

                      
Query: 403  ggaataccac 412
            ||||| ||||
Sbjct: 1204 ggaatgccac 1195



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>gb|AC027702.18| Homo sapiens chromosome 8, clone RP11-108L9, complete sequence
          Length = 125719

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 25    ttacaacatatatatgtatccc 46
             ||||||||||||||||||||||
Sbjct: 76544 ttacaacatatatatgtatccc 76523



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>dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGL6
          Length = 79459

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 12    agtgattacaacattacaacat 33
             ||||||||||||||||||||||
Sbjct: 53772 agtgattacaacattacaacat 53751



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>emb|CR847806.15| Zebrafish DNA sequence from clone CH211-267J10 in linkage group 8,
             complete sequence
          Length = 151455

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 18    tacaacattacaacatatatatgta 42
             |||||||| ||||||||||||||||
Sbjct: 28951 tacaacatcacaacatatatatgta 28927



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>gb|AC158342.4| Mus musculus chromosome 1, clone RP23-12H12, complete sequence
          Length = 224295

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     atatatatgtatcccagcaca 52
              |||||||||||||||||||||
Sbjct: 172711 atatatatgtatcccagcaca 172691



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>gb|AC091969.3| Homo sapiens chromosome 5 clone RP11-501F22, complete sequence
          Length = 177647

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    tgtatcccagcacagacatcc 59
             |||||||||||||||||||||
Sbjct: 50663 tgtatcccagcacagacatcc 50643



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>gb|AC091829.2| Homo sapiens chromosome 5 clone CTD-2021O22, complete sequence
          Length = 92702

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 39   tgtatcccagcacagacatcc 59
            |||||||||||||||||||||
Sbjct: 5857 tgtatcccagcacagacatcc 5877



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>gb|AC134788.10| Mus musculus chromosome 1, clone RP24-482A14, complete sequence
          Length = 157535

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    atatatatgtatcccagcaca 52
             |||||||||||||||||||||
Sbjct: 51321 atatatatgtatcccagcaca 51341



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>ref|XM_632282.1| Dictyostelium discoideum hypothetical protein (DDB0187318), partial
           mRNA
          Length = 4314

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 507 cattgcatcttgtctttcct 526
           ||||||||||||||||||||
Sbjct: 876 cattgcatcttgtctttcct 895



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>gb|AC007865.8| Trypanosoma brucei chromosome 2 clone RPCI93-30M24, complete sequence
          Length = 148533

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    caacattacaacatatatat 39
             ||||||||||||||||||||
Sbjct: 67353 caacattacaacatatatat 67334



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    caacattacaacatatatat 39
             ||||||||||||||||||||
Sbjct: 44230 caacattacaacatatatat 44211



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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     caacattacaacatatatat 39
              ||||||||||||||||||||
Sbjct: 867012 caacattacaacatatatat 867031



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     caacattacaacatatatat 39
              ||||||||||||||||||||
Sbjct: 843889 caacattacaacatatatat 843908



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>gb|AC104863.12| Mus musculus chromosome 6, clone RP23-109C11, complete sequence
          Length = 198321

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    attacaacatatatatgtat 43
             ||||||||||||||||||||
Sbjct: 81919 attacaacatatatatgtat 81938



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>gb|DQ269451.2| Stevia rebaudiana IPP/DMAPP synthase (ispH) mRNA, complete cds
          Length = 1637

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 504  atacattgcatcttgtctttcctgtgtagcatcaca 539
            |||||| |||||||||| ||| || |||||||||||
Sbjct: 1125 atacatagcatcttgtcgttcttgagtagcatcaca 1090



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>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12,
              complete sequence
          Length = 128574

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     caacattacaacatatatat 39
              ||||||||||||||||||||
Sbjct: 101460 caacattacaacatatatat 101441



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>emb|BX537103.6| Zebrafish DNA sequence from clone CH211-194E1 in linkage group 8,
              complete sequence
          Length = 187569

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     attacaacattacaacatat 35
              ||||||||||||||||||||
Sbjct: 138189 attacaacattacaacatat 138170



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>gb|AC018680.4|AC018680 Homo sapiens BAC clone RP11-384E2 from 4, complete sequence
          Length = 181850

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   aaatgagaagtattactgga 452
             ||||||||||||||||||||
Sbjct: 97056 aaatgagaagtattactgga 97075



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 20      caacattacaacatatatat 39
               ||||||||||||||||||||
Sbjct: 9769254 caacattacaacatatatat 9769235



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>emb|BX950457.1| Gallus gallus finished cDNA, clone ChEST992n21
          Length = 1065

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 179  tgaaaatctatgcaacctgc 198
            ||||||||||||||||||||
Sbjct: 1005 tgaaaatctatgcaacctgc 1024



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>emb|BX890594.1|OSJN00301 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062N22,
             complete sequence
          Length = 181586

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    caacattacaacatatatat 39
             ||||||||||||||||||||
Sbjct: 10770 caacattacaacatatatat 10751



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>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0050N02, complete sequence
          Length = 133373

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   tatgcaacctgcaaaacttc 206
             ||||||||||||||||||||
Sbjct: 24523 tatgcaacctgcaaaacttc 24542


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,802,660
Number of Sequences: 3902068
Number of extensions: 4802660
Number of successful extensions: 106889
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 106618
Number of HSP's gapped (non-prelim): 268
length of query: 543
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 520
effective length of database: 17,143,297,704
effective search space: 8914514806080
effective search space used: 8914514806080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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