>LRTM3_MOUSE (Q8BZ81) Leucine-rich repeat transmembrane neuronal protein 3|
           precursor
          Length = 582

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -1

Query: 138 CTFSNMGDESCNHPLRSVCTHGVDYLHITRYKCNIQHELL 19
           CT+S  G   C  PL    +  + Y   T   C + HELL
Sbjct: 502 CTYSKSGSRECEIPLSMNVSTFLAYDQPTISYCGVHHELL 541

>IL2RB_RAT (P26896) Interleukin-2 receptor beta chain precursor (IL-2|
           receptor) (P70-75) (High affinity IL-2 receptor beta
           subunit) (CD122 antigen)
          Length = 537

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -1

Query: 144 KSCTFSNMGDESCNHP---LRSVCTHGVDYLHITRYKCNIQHEL 22
           K+CTF         HP   LR +  H +  LHI   +CNI  E+
Sbjct: 121 KTCTF---------HPFDNLRLIAPHSLQVLHIETRRCNISWEV 155

>LRTM3_MACFA (Q9BGP6) Leucine-rich repeat transmembrane neuronal protein 3|
           precursor
          Length = 581

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 138 CTFSNMGDESCNHPLRSVCTHGVDYLHITRYKCNIQHELL 19
           CT++  G   C  PL    +  + Y   T   C + HELL
Sbjct: 501 CTYNKSGSRECEIPLSMNVSTFLAYDQPTISYCGVHHELL 540

>LRTM3_HUMAN (Q86VH5) Leucine-rich repeat transmembrane neuronal protein 3|
           precursor
          Length = 581

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 138 CTFSNMGDESCNHPLRSVCTHGVDYLHITRYKCNIQHELL 19
           CT++  G   C  PL    +  + Y   T   C + HELL
Sbjct: 501 CTYNKSGSRECEIPLSMNVSTFLAYDQPTISYCGVHHELL 540


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,029,176
Number of Sequences: 219361
Number of extensions: 680041
Number of successful extensions: 1464
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 80,573,946
effective HSP length: 59
effective length of database: 67,631,647
effective search space used: 1623159528
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)