ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7h17 |
|---|---|
| Clone Library Name | barley_pub |
>HPPD_HORVU (O48604) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 434 Score = 176 bits (447), Expect = 3e-44 Identities = 92/101 (91%), Positives = 92/101 (91%) Frame = -3 Query: 531 LAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERG 352 LAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERG Sbjct: 334 LAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERG 393 Query: 351 EEYQXXXXXXXXXGNFSELFKSIEDYEKSLEAKQSAAVQGS 229 EEYQ GNFSELFKSIEDYEKSLEAKQSAAVQGS Sbjct: 394 EEYQKGGCGGFGKGNFSELFKSIEDYEKSLEAKQSAAVQGS 434
>HPPD_ARATH (P93836) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 445 Score = 139 bits (351), Expect = 4e-33 Identities = 67/92 (72%), Positives = 78/92 (84%) Frame = -3 Query: 525 GDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEE 346 GDVLS+ QIKEC+ELG+LVDRDDQG LLQIFTKP+GDRPT+F+E+IQR+GCM KDE G+ Sbjct: 351 GDVLSDDQIKECEELGILVDRDDQGTLLQIFTKPLGDRPTIFIEIIQRVGCMMKDEEGKA 410 Query: 345 YQXXXXXXXXXGNFSELFKSIEDYEKSLEAKQ 250 YQ GNFSELFKSIE+YEK+LEAKQ Sbjct: 411 YQSGGCGGFGKGNFSELFKSIEEYEKTLEAKQ 442
>HPPD_DAUCA (O23920) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 442 Score = 138 bits (348), Expect = 8e-33 Identities = 67/92 (72%), Positives = 78/92 (84%) Frame = -3 Query: 525 GDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEE 346 GDVLS+ QIKEC++LG+LVDRDDQG LLQIFTKPVGDRPTLF+E+IQR+GCM KD+ G+ Sbjct: 344 GDVLSDEQIKECEDLGILVDRDDQGTLLQIFTKPVGDRPTLFIEIIQRVGCMLKDDAGQM 403 Query: 345 YQXXXXXXXXXGNFSELFKSIEDYEKSLEAKQ 250 YQ GNFSELFKSIE+YEK+LEAKQ Sbjct: 404 YQKGGCGGFGKGNFSELFKSIEEYEKTLEAKQ 435
>HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 436 Score = 135 bits (340), Expect = 7e-32 Identities = 65/92 (70%), Positives = 77/92 (83%) Frame = -3 Query: 528 AGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGE 349 AGDVLS+ QI+EC++LG+L+DRDDQG LLQIFTKPVGDRPTLF+E+IQR+GCM KDE G+ Sbjct: 337 AGDVLSDEQIEECEKLGILIDRDDQGTLLQIFTKPVGDRPTLFIEIIQRVGCMMKDEEGK 396 Query: 348 EYQXXXXXXXXXGNFSELFKSIEDYEKSLEAK 253 YQ GNFSELFKSIE+YEK LE+K Sbjct: 397 MYQKGGCGGFGKGNFSELFKSIEEYEKMLESK 428
>HPPD_BRARE (Q6TGZ5) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 397 Score = 61.6 bits (148), Expect = 1e-09 Identities = 30/40 (75%), Positives = 34/40 (85%) Frame = -3 Query: 501 IKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 +K QEL +LVD DD+G LLQIFTKPV DRPTLFLE+IQR Sbjct: 315 LKTLQELKILVDFDDKGYLLQIFTKPVQDRPTLFLEVIQR 354
>HPPD_STRCO (Q9S2F4) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 381 Score = 60.1 bits (144), Expect = 4e-09 Identities = 35/70 (50%), Positives = 42/70 (60%) Frame = -3 Query: 489 QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXXXXXXXG 310 +EL +LVDRD+ G LLQIFTKPV DRPT+F EMI+R G M G Sbjct: 318 RELKILVDRDEDGYLLQIFTKPVQDRPTVFFEMIERHGSM---------------GFGKG 362 Query: 309 NFSELFKSIE 280 NF LF++IE Sbjct: 363 NFKALFEAIE 372
>HPPD_RAT (P32755) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (4-hydroxyphenylpyruvic acid oxidase) (HPPDase) (F protein) (F Alloantigen) Length = 392 Score = 59.7 bits (143), Expect = 5e-09 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Frame = -3 Query: 513 SEAQIKE----CQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEE 346 S+ Q+KE +EL +LVD D++G LLQIFTKP+ DRPTLFLE+IQR + +G Sbjct: 305 SKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQR-----HNHQG-- 357 Query: 345 YQXXXXXXXXXGNFSELFKSIED 277 GNF+ LFK+ E+ Sbjct: 358 --------FGAGNFNSLFKAFEE 372
>HPPD_XENTR (Q5BKL0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 394 Score = 58.9 bits (141), Expect = 8e-09 Identities = 28/36 (77%), Positives = 32/36 (88%) Frame = -3 Query: 489 QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 QEL +LVD DD+G LLQIFTKP+ DRPTLFLE+IQR Sbjct: 319 QELKILVDYDDKGYLLQIFTKPMQDRPTLFLEVIQR 354
>HPPD_HUMAN (P32754) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 392 Score = 58.9 bits (141), Expect = 8e-09 Identities = 36/75 (48%), Positives = 46/75 (61%) Frame = -3 Query: 501 IKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXXXX 322 I +EL +LVD D++G LLQIFTKPV DRPTLFLE+IQR + +G Sbjct: 313 IDALEELKILVDYDEKGYLLQIFTKPVQDRPTLFLEVIQR-----HNHQG---------- 357 Query: 321 XXXGNFSELFKSIED 277 GNF+ LFK+ E+ Sbjct: 358 FGAGNFNSLFKAFEE 372
>HPPD_MOUSE (P49429) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (4-hydroxyphenylpyruvic acid oxidase) (HPPDase) (F protein) (F Alloantigen) Length = 392 Score = 58.5 bits (140), Expect = 1e-08 Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Frame = -3 Query: 513 SEAQIKEC----QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEE 346 ++ Q+KE +EL +LVD D++G LLQIFTKP+ DRPTLFLE+IQR + +G Sbjct: 305 AKIQVKESMDVLEELHILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQR-----HNHQG-- 357 Query: 345 YQXXXXXXXXXGNFSELFKSIED 277 GNF+ LFK+ E+ Sbjct: 358 --------FGAGNFNSLFKAFEE 372
>HPPD_BOVIN (Q5EA20) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 392 Score = 57.8 bits (138), Expect = 2e-08 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%) Frame = -3 Query: 516 LSEAQIKE----CQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGE 349 +++ ++KE +EL +LVD D++G LLQIFTKP+ DRPTLFLE+IQR + +G Sbjct: 304 MAKIRVKENIDILEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQR-----HNHQG- 357 Query: 348 EYQXXXXXXXXXGNFSELFKSIED 277 GNF+ LFK+ E+ Sbjct: 358 ---------FGAGNFNSLFKAFEE 372
>HPPD_STRAW (Q53586) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 381 Score = 57.0 bits (136), Expect = 3e-08 Identities = 33/70 (47%), Positives = 41/70 (58%) Frame = -3 Query: 489 QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXXXXXXXG 310 +EL +L DRD+ G LLQIFTKPV DRPT+F E+I+R G M G Sbjct: 318 RELKILADRDEDGYLLQIFTKPVQDRPTVFFEIIERHGSM---------------GFGKG 362 Query: 309 NFSELFKSIE 280 NF LF++IE Sbjct: 363 NFKALFEAIE 372
>HPPD_PIG (Q02110) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 392 Score = 57.0 bits (136), Expect = 3e-08 Identities = 33/74 (44%), Positives = 47/74 (63%) Frame = -3 Query: 489 QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXXXXXXXG 310 +EL +LVD D++G LLQIFTKP+ DRPT+FLE+IQR + +G G Sbjct: 317 EELKILVDYDEKGYLLQIFTKPMQDRPTVFLEVIQR-----NNHQG----------FGAG 361 Query: 309 NFSELFKSIEDYEK 268 NF+ LFK+ E+ ++ Sbjct: 362 NFNSLFKAFEEEQE 375
>HPPD_CAEBR (Q60Y65) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 393 Score = 55.5 bits (132), Expect = 9e-08 Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%) Frame = -3 Query: 516 LSEAQIKE----CQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGE 349 +S +IKE Q+L +LVD D+ G LLQIF+KP DRPTLFLE+IQR ++ +G Sbjct: 306 VSSMKIKEDMDRLQKLHILVDFDENGYLLQIFSKPCQDRPTLFLEIIQR-----QNHQG- 359 Query: 348 EYQXXXXXXXXXGNFSELFKSIE 280 GNF LF+SIE Sbjct: 360 ---------FGAGNFKALFESIE 373
>HPPD_CAEEL (Q22633) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 393 Score = 55.1 bits (131), Expect = 1e-07 Identities = 35/83 (42%), Positives = 47/83 (56%) Frame = -3 Query: 528 AGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGE 349 A ++ + + Q+L +LVD D+ G LLQIF+KP DRPTLFLE+IQR ++ G Sbjct: 306 ASSMVVKEDMDRLQKLHILVDFDENGYLLQIFSKPCQDRPTLFLEIIQR-----QNHEG- 359 Query: 348 EYQXXXXXXXXXGNFSELFKSIE 280 GNF LF+SIE Sbjct: 360 ---------FGAGNFKALFESIE 373
>YBWL_CAEEL (Q18347) Hypothetical protein C31H2.4 in chromosome X| Length = 364 Score = 54.7 bits (130), Expect = 2e-07 Identities = 24/47 (51%), Positives = 37/47 (78%) Frame = -3 Query: 522 DVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 +++ + +K +EL +L+D D+ G LLQIF+KP+ DRPTLF+E+IQR Sbjct: 289 NLIVKEDLKMIRELNILMDFDENGYLLQIFSKPLQDRPTLFIEIIQR 335
>HPPD_YARLI (Q6CDR5) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 394 Score = 53.5 bits (127), Expect = 4e-07 Identities = 23/43 (53%), Positives = 34/43 (79%) Frame = -3 Query: 510 EAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 E + ++ Q L +L+D D+ G LLQ+FTKP+ DRPT+F+E+IQR Sbjct: 324 EEKFEDIQALNILIDFDEGGYLLQLFTKPLMDRPTVFIEIIQR 366
>HPPD_TETTH (Q27203) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) (F-antigen homolog) (TF-AG) Length = 404 Score = 52.4 bits (124), Expect = 8e-07 Identities = 25/36 (69%), Positives = 30/36 (83%) Frame = -3 Query: 489 QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 Q+ +LVD D++G LLQIFTKPV DRPTLF E+IQR Sbjct: 333 QKNHILVDYDEKGYLLQIFTKPVEDRPTLFYEIIQR 368
>HPPD_NEUCR (Q872T7) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 412 Score = 52.0 bits (123), Expect = 1e-06 Identities = 22/36 (61%), Positives = 31/36 (86%) Frame = -3 Query: 489 QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 Q+L +L+D D+ G LLQ+FTKP+ DRPT+F+E+IQR Sbjct: 349 QKLNILIDYDEGGYLLQLFTKPLMDRPTVFIEIIQR 384
>HPPD_MYCGR (O42764) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 419 Score = 51.6 bits (122), Expect = 1e-06 Identities = 22/36 (61%), Positives = 31/36 (86%) Frame = -3 Query: 489 QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 Q+L +L+D D+ G LLQ+FTKP+ DRPT+F+E+IQR Sbjct: 356 QKLNILIDFDEGGYLLQLFTKPLMDRPTVFIEIIQR 391
>HPPD2_ASPFU (Q4WPV8) Probable 4-hydroxyphenylpyruvate dioxygenase 2 (EC| 1.13.11.27) (4HPPD 2) (HPD 2) (HPPDase 2) Length = 406 Score = 49.3 bits (116), Expect = 7e-06 Identities = 24/43 (55%), Positives = 33/43 (76%) Frame = -3 Query: 510 EAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 E I ++L +LVD D++G LLQIF+K V DRPT+F+E+IQR Sbjct: 336 EEDIAVLEKLHILVDFDEKGYLLQIFSKHVLDRPTVFIEVIQR 378
>HPPD_MAGGR (Q96X22) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 419 Score = 47.8 bits (112), Expect = 2e-05 Identities = 29/66 (43%), Positives = 40/66 (60%) Frame = -3 Query: 477 VLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXXXXXXXGNFSE 298 +L+D D+ G LLQ+FT+P+ DRPT+F+E+IQR E D G GNF Sbjct: 360 ILIDYDEGGYLLQLFTRPLMDRPTVFIEIIQR---NEFDGFG------------AGNFKS 404 Query: 297 LFKSIE 280 LF++IE Sbjct: 405 LFEAIE 410
>HPPD_COCIM (Q00415) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (T-cell reactive protein) Length = 399 Score = 47.4 bits (111), Expect = 3e-05 Identities = 24/48 (50%), Positives = 34/48 (70%) Frame = -3 Query: 525 GDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 G VL E + + L +L+D D+ G LLQ+FTK + DRPT+F+E+IQR Sbjct: 324 GLVLDE-DFETLKSLDILIDFDENGYLLQLFTKHLMDRPTVFIEIIQR 370
>HPPD1_ASPFU (Q4WHU1) Probable 4-hydroxyphenylpyruvate dioxygenase 1 (EC| 1.13.11.27) (4HPPD 1) (HPD 1) (HPPDase 1) Length = 403 Score = 46.2 bits (108), Expect = 6e-05 Identities = 24/49 (48%), Positives = 34/49 (69%) Frame = -3 Query: 528 AGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 382 AG L E + + L +L+D D+ G LLQ+FTK + DRPT+F+E+IQR Sbjct: 327 AGLTLHE-DFETIRSLDILIDFDEGGYLLQLFTKHLMDRPTVFIEIIQR 374
>Y090_SYNY3 (Q55810) Hypothetical protein slr0090| Length = 339 Score = 34.3 bits (77), Expect = 0.22 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Frame = -3 Query: 495 ECQELGVLVDRDDQG--VLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXXXX 322 +C E+ +L D+D+ G +LLQIF++P TLF E+I+R + +G Sbjct: 272 QCLEI-LLDDQDNTGERLLLQIFSQPCYGVGTLFWEIIERRHRAKGFGQG---------- 320 Query: 321 XXXGNFSELFKSIEDYEKSLE 259 NF L++++E EK LE Sbjct: 321 ----NFQALYEAVETLEKQLE 337
>MELA_SHECO (P23996) Protein melA| Length = 346 Score = 33.9 bits (76), Expect = 0.29 Identities = 27/66 (40%), Positives = 35/66 (53%) Frame = -3 Query: 477 VLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXXXXXXXGNFSE 298 +LVD D+ G LLQIFTK + +F+E+IQR K+ G GNF Sbjct: 289 ILVDGDEDGYLLQIFTKNLFG--PIFIEIIQR-----KNNLG----------FGEGNFKA 331 Query: 297 LFKSIE 280 LF+SIE Sbjct: 332 LFESIE 337
>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1431 Score = 30.0 bits (66), Expect = 4.2 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = +3 Query: 450 PLGRPYRRAHPAPGIP*SAPPRGHPRQG 533 PLG P R P P IP PRG P +G Sbjct: 888 PLGPPGPRGPPGPSIPGPPGPRGPPGEG 915
>VLLY_VIBVU (O06695) Hemolysin vllY| Length = 357 Score = 29.3 bits (64), Expect = 7.2 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%) Frame = -3 Query: 501 IKECQELGVLVDRDD--QGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXX 328 + ++L +L+D G+LLQIFT+ V +F E+IQR G + GE Sbjct: 287 VSRLRDLRILIDGAPLKDGILLQIFTQTV--IGPVFFEIIQRKG---NEGFGE------- 334 Query: 327 XXXXXGNFSELFKSIED 277 GNF LF+SIE+ Sbjct: 335 -----GNFKALFESIEE 346
>ADRB3_CANFA (O02662) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3| adrenoreceptor) Length = 405 Score = 29.3 bits (64), Expect = 7.2 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -1 Query: 329 AAGSAKATSPS--CSSPLKITRSPLKPSNLLQFRDHR 225 AA +++ P+ C+SP + L+P+ LL R+HR Sbjct: 253 AASRSRSPGPARRCASPAAVPSDRLRPARLLPLREHR 289
>ALP16_SCHPO (P87244) Spindle pole body component alp16 (Altered polarity| protein 16) Length = 759 Score = 28.9 bits (63), Expect = 9.3 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -3 Query: 297 LFKSIEDYEKSLEAKQSAAVQGS*DRSWSLYHGLME 190 LF++ D+E S+E K + V + SWS Y G E Sbjct: 651 LFQAQSDFESSVELKDRSIVTKTTIMSWSKYQGTKE 686
>TKT1_CANAL (O94039) Transketolase 1 (EC 2.2.1.1) (TK 1)| Length = 677 Score = 28.9 bits (63), Expect = 9.3 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = +2 Query: 356 LSSFSMHPILWIISRNKVGLSPTG 427 LS+ S HP++W+ + + +GL G Sbjct: 452 LSALSHHPVIWVATHDSIGLGEDG 475 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,609,621 Number of Sequences: 219361 Number of extensions: 1466114 Number of successful extensions: 3746 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 3546 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3737 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
