| Clone Name | rbaal23n02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CYB_TOXGO (O20672) Cytochrome b | 30 | 2.0 | 2 | CYB_AUSSU (Q9MLL3) Cytochrome b | 28 | 7.5 | 3 | YFM7_YEAST (P43625) Hypothetical 17.5 kDa protein in HXK1 3'region | 28 | 7.5 | 4 | CYB6_GLOVI (Q7NJB3) Cytochrome b6 | 27 | 9.8 |
|---|
>CYB_TOXGO (O20672) Cytochrome b| Length = 368 Score = 29.6 bits (65), Expect = 2.0 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = -1 Query: 201 ALLAGYLFLCILVYLNQGLYSIIY 130 A A ++FLCIL+++ +GLY+ Y Sbjct: 83 ATTASFVFLCILIHMTRGLYNWSY 106
>CYB_AUSSU (Q9MLL3) Cytochrome b| Length = 367 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = -1 Query: 201 ALLAGYLFLCILVYLNQGLYSIIYISIKV 115 A+ A F+CI +++ +GLY +Y++ KV Sbjct: 76 AIGASMFFICIYIHIARGLYYGLYLNKKV 104
>YFM7_YEAST (P43625) Hypothetical 17.5 kDa protein in HXK1 3'region| Length = 151 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 199 FVGWIFISMHLSIFKPGSLFHYLHFHKSRAF 107 F W + S +LSI++ LFH+L S F Sbjct: 65 FFAWQYTSYYLSIYRQSFLFHFLQKDFSNDF 95
>CYB6_GLOVI (Q7NJB3) Cytochrome b6| Length = 215 Score = 27.3 bits (59), Expect = 9.8 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Frame = -3 Query: 208 ELSFVGWIFISMHLSIFKPGSLFHYLH---------FHKSRAFT*CKVVLSACLAVNLSL 56 E+SF GW+ S+H L LH F + R T VL ACL V+ + Sbjct: 75 EVSF-GWLIRSIHRWSASMMVLAMILHTFRVYLTGGFKRPRELTWVTGVLLACLTVSFGV 133 Query: 55 AGYKFSENQL 26 GY +Q+ Sbjct: 134 TGYSLPWDQV 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,610,945 Number of Sequences: 219361 Number of extensions: 569029 Number of successful extensions: 1992 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1980 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1992 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)