ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24b14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ARR1_ARATH (Q940D0) Two-component response regulator ARR1 44 4e-04
2ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18 43 5e-04
3ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Recei... 43 7e-04
4ARR14_ARATH (Q8L9Y3) Two-component response regulator ARR14 42 0.002
5ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Rec... 41 0.002
6ARR12_ARATH (P62598) Two-component response regulator ARR12 40 0.006
7ARR10_ARATH (O49397) Two-component response regulator ARR10 (Rec... 38 0.017
8APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2... 37 0.038
9MYBF_ARATH (Q700D9) Putative Myb family transcription factor At1... 37 0.049
10ARR13_ARATH (Q9ZVD3) Putative two-component response regulator A... 36 0.084
11ARR21_ARATH (Q9LYP5) Putative two-component response regulator A... 35 0.14
12ARR20_ARATH (Q9LZJ8) Putative two-component response regulator A... 32 1.2
13CATE_RABIT (P43159) Cathepsin E precursor (EC 3.4.23.34) 31 2.7
14APRR4_ARATH (Q9FJ16) Putative two-component response regulator-l... 31 2.7
15ARR19_ARATH (Q9M9B9) Putative two-component response regulator A... 30 3.5
16SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precurs... 29 7.9
17BMP2K_MOUSE (Q91Z96) BMP-2-inducible protein kinase (EC 2.7.11.1... 29 7.9

>ARR1_ARATH (Q940D0) Two-component response regulator ARR1|
          Length = 690

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYRLHTSR 458
           A PK+I ELM V GLT + V SHLQKYR++  R
Sbjct: 262 AVPKKILELMNVPGLTRENVASHLQKYRIYLRR 294



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>ARR18_ARATH (Q9FGT7) Two-component response regulator ARR18|
          Length = 635

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYRLHTSR 458
           A PK+I +LM ++GLT + V SHLQKYRL+  +
Sbjct: 219 AVPKKILDLMSIEGLTRENVASHLQKYRLYLKK 251



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>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like|
           protein 5)
          Length = 664

 Score = 42.7 bits (99), Expect = 7e-04
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYRLHTSR 458
           A PK+I E+M V GLT + V SHLQKYR++  R
Sbjct: 241 AVPKKILEMMNVPGLTRENVASHLQKYRIYLRR 273



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>ARR14_ARATH (Q8L9Y3) Two-component response regulator ARR14|
          Length = 382

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYRLHTSR 458
           A PK+I ELM V GL+ + V SHLQK+RL+  R
Sbjct: 225 AVPKRILELMNVPGLSRENVASHLQKFRLYLKR 257



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>ARR11_ARATH (Q9FXD6) Two-component response regulator ARR11 (Receiver-like|
           protein 3)
          Length = 521

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/33 (60%), Positives = 24/33 (72%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYRLHTSR 458
           A PK+I +LM V  LT + V SHLQKYRL+ SR
Sbjct: 219 AGPKKILDLMNVPWLTRENVASHLQKYRLYLSR 251



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>ARR12_ARATH (P62598) Two-component response regulator ARR12|
          Length = 596

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 18/33 (54%), Positives = 24/33 (72%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYRLHTSR 458
           A PK+I +LM V+ LT + V SHLQK+RL+  R
Sbjct: 220 AMPKKILDLMNVEKLTRENVASHLQKFRLYLKR 252



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>ARR10_ARATH (O49397) Two-component response regulator ARR10 (Receiver-like|
           protein 4)
          Length = 552

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYRL 470
           A PK+I +LM VD LT + V SHLQK+R+
Sbjct: 208 AVPKKILDLMNVDKLTRENVASHLQKFRV 236



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>APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2|
           (Pseudo-response regulator 2) (TOC2 protein)
          Length = 535

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 18/30 (60%), Positives = 20/30 (66%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYRLH 467
           A P +I ELMKV  LT   V SHLQK+R H
Sbjct: 321 AIPSRILELMKVGTLTRHNVASHLQKFRQH 350



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>MYBF_ARATH (Q700D9) Putative Myb family transcription factor At1g14600|
          Length = 255

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYR 473
           ATPK + ++M V GLT   VKSHLQ YR
Sbjct: 49  ATPKLVLKIMDVKGLTISHVKSHLQMYR 76



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>ARR13_ARATH (Q9ZVD3) Putative two-component response regulator ARR13|
          Length = 572

 Score = 35.8 bits (81), Expect = 0.084
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = -1

Query: 550 PKQIRELMKVDGLTNDEVKSHLQKYRLHTSR 458
           PK+I  +M V  LT + V SHLQKYRL   R
Sbjct: 252 PKKILAIMNVPYLTRENVASHLQKYRLFVKR 282



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>ARR21_ARATH (Q9LYP5) Putative two-component response regulator ARR21|
          Length = 592

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQKYRLHTSR 458
           A PK+I   M V  LT + V SHLQKYR+   R
Sbjct: 247 AVPKKILAFMSVPYLTRENVASHLQKYRIFLRR 279



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>ARR20_ARATH (Q9LZJ8) Putative two-component response regulator ARR20|
          Length = 426

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -1

Query: 547 KQIRELMKVDGLTNDEVKSHLQKYR 473
           K ++E + V GLT + V SHLQKYR
Sbjct: 244 KYMQEELNVQGLTRNNVASHLQKYR 268



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>CATE_RABIT (P43159) Cathepsin E precursor (EC 3.4.23.34)|
          Length = 396

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 192 SPLIGPSDRLLDCSFECGFTP-DGNVAVGAYTLFALPGATFV 314
           S + GPSD+++      G TP DG  AV    L  +P  TFV
Sbjct: 285 SLITGPSDKIIQLQAAIGATPMDGEYAVECENLNIMPDVTFV 326



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>APRR4_ARATH (Q9FJ16) Putative two-component response regulator-like APRR4|
           (Pseudo-response regulator 4)
          Length = 292

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = -1

Query: 556 ATPKQIRELMKVDGLTNDEVKSHLQ 482
           A PK+I ++MKVD ++ + V SHLQ
Sbjct: 248 AVPKKILDVMKVDYISRENVASHLQ 272



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>ARR19_ARATH (Q9M9B9) Putative two-component response regulator ARR19|
          Length = 407

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
 Frame = -1

Query: 556 ATPKQIREL---MKVDGLTNDEVKSHLQKYRLH 467
           A PK + E    M+++G+T   V SHLQK+R++
Sbjct: 241 ANPKVLVECLQEMRIEGITRSNVASHLQKHRIN 273



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>SREC_HUMAN (Q14162) Endothelial cells scavenger receptor precursor (Acetyl LDL|
           receptor) (Scavenger receptor class F member 1)
          Length = 830

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
 Frame = -1

Query: 367 PQQEYXXXXXXXXXATDATNVAPGSANKVYAPTATLPSGVKPH-------SKEQSSRRSE 209
           P+Q           A+ +   +P SA K   P AT P  V+P        +  +SSRR++
Sbjct: 732 PRQALNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTESSRRAQ 791

Query: 208 GPMSG 194
            P+SG
Sbjct: 792 EPVSG 796



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>BMP2K_MOUSE (Q91Z96) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)|
          Length = 1138

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = -3

Query: 551 TEADPGADEGRRPHQRRGQEPFAEVPF-----AHVKAAELHGPEQ 432
           T +D   D    PH R  +EPFA VPF     +  K    H P Q
Sbjct: 644 TPSDKTVDLPPAPHSRPPEEPFASVPFISHSGSPEKKTTEHSPNQ 688


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,022,020
Number of Sequences: 219361
Number of extensions: 981097
Number of successful extensions: 2391
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2390
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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