ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PHLA1_RAT (Q9QZA1) Pleckstrin homology-like domain family A memb... 32 0.59
2PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A me... 30 1.3

>PHLA1_RAT (Q9QZA1) Pleckstrin homology-like domain family A member 1|
           (Proline- and glutamine-rich protein) (PQR protein)
          Length = 263

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +1

Query: 13  PLLLPRNVPTAHGNNYDHPHGSKIPPQPSLR*HRHDIIITSSRLHRLCHRTS 168
           P L P   P AH + + HPH     P P    H H  + +  + HRL   TS
Sbjct: 214 PHLYPHPHPHAHSHPHPHPH-----PHPHQLQHAHQPLHSQPQGHRLLRSTS 260



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>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 25  PRNVPTAHGNNYDHPHGSKIP---PQPSLR*HRHDIIITSS 138
           P + P +H + + HPH  +IP   PQP  + H H ++ ++S
Sbjct: 216 PHSHPHSHPHPHPHPHPHQIPHPHPQPHSQPHGHRLLRSTS 256


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,287,873
Number of Sequences: 219361
Number of extensions: 406209
Number of successful extensions: 868
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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