ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal24b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4,... 200 4e-48
2emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4,... 200 4e-48
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 200 4e-48
4ref|XM_473103.1| Oryza sativa (japonica cultivar-group), predic... 194 3e-46
5dbj|AK067042.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 3e-46
6gb|AY856370.1| Zea mays DNA mismatch repair protein (MSH1) mRNA,... 101 3e-18
7ref|NM_001013397.1| Gallus gallus myosin, heavy polypeptide 1, s... 44 0.58
8gb|AY866434.1| Lycopersicon esculentum DNA mismatch repair prote... 44 0.58
9gb|AC079782.6| Homo sapiens BAC clone RP11-385J23 from 2, comple... 44 0.58
10gb|U87231.1|GGU87231 Gallus gallus myosin heavy chain mRNA, comp... 44 0.58
11gb|M13512.1|CHKMYHB Chicken fast-white myosin heavy chain (adult... 44 0.58
12gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, co... 42 2.3
13gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome... 42 2.3
14gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 42 2.3
15gb|DQ496100.1| Homo sapiens hephaestin (HEPH) gene, complete cds 40 9.0
16gb|AC147026.2| Mus musculus BAC clone RP23-249A22 from chromosom... 40 9.0
17gb|AC161381.2| Mus musculus BAC clone RP23-166L22 from chromosom... 40 9.0
18ref|XM_849583.1| PREDICTED: Canis familiaris similar to Rho-rela... 40 9.0
19gb|AC003108.1|HUAC003108 Human Chromosome 16 BAC clone CIT987SK-... 40 9.0
20gb|AC126674.3| Mus musculus BAC clone RP23-364B6 from chromosome... 40 9.0
21emb|AL355480.22| Human DNA sequence from clone RP4-697E16 on chr... 40 9.0
22gb|AY135565.1| Betula pendula clone fad7 omega-3 fatty acid desa... 40 9.0
23emb|AL030998.1|HS466I8 Human DNA sequence from clone RP3-466I8 o... 40 9.0
24ref|NM_001030933.1| Gallus gallus similar to PSL1; presenilin-li... 40 9.0
25gb|AC155807.3| Mus musculus BAC clone RP24-303N21 from chromosom... 40 9.0
26emb|AJ851767.1| Gallus gallus mRNA for hypothetical protein, clo... 40 9.0
27emb|AJ720217.1| Gallus gallus mRNA for hypothetical protein, clo... 40 9.0
28gb|AF272033.1| Gallus gallus fast myosin heavy chain isoform 2 m... 40 9.0
29dbj|AK057646.1| Homo sapiens cDNA FLJ33084 fis, clone TRACH2000411 40 9.0
30gb|AC158354.2| Mus musculus BAC clone RP24-160P23 from chromosom... 40 9.0
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
32gb|AC012621.8| Homo sapiens chromosome 16 clone CTD-2055J8, comp... 40 9.0
33emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 9.0
34ref|NM_204228.1| Gallus gallus myosin, heavy polypeptide 1, skel... 40 9.0
35gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.0
36emb|AL954156.3|CNS08CCU Oryza sativa chromosome 12, . BAC OSJNBa... 40 9.0
37gb|AC113282.19| Mus musculus chromosome 1, clone RP23-393I20, co... 40 9.0
38gb|M13515.1|CHKMYHD Chicken fast white myosin heavy chain gene, ... 40 9.0 
>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11,
             complete sequence
          Length = 143582

 Score =  200 bits (101), Expect = 4e-48
 Identities = 164/185 (88%)
 Strand = Plus / Plus

                                                                         
Query: 264   cgatgcttgccatctgccttgttggtgagcttaaaacctttcgagggtagctgatttatg 323
             |||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||
Sbjct: 81336 cgatgcttgccatctgccttgttgatgagcttgaaacctttcaaaggtagctgatttatg 81395

                                                                         
Query: 324   agaagagtctccagttggcacgcaacgctcttgccaggaaccacgatgtatagtattgtg 383
             |||||||| ||||||||||| |||| |||||| ||||| ||||  || |||| ||| |||
Sbjct: 81396 agaagagtttccagttggcatgcaatgctcttcccaggtaccaaaatatataatatcgtg 81455

                                                                         
Query: 384   gcatcttgcataccttccttggatctatgagcaccaagacggcccacgagatcatccgtc 443
             ||||| |||||||||||||| ||||| ||||||| ||| || ||||| ||||||||||||
Sbjct: 81456 gcatcctgcataccttccttcgatctgtgagcactaagtcgacccacaagatcatccgtc 81515

                  
Query: 444   tgcag 448
             |||||
Sbjct: 81516 tgcag 81520



 Score =  168 bits (85), Expect = 1e-38
 Identities = 130/145 (89%)
 Strand = Plus / Plus

                                                                         
Query: 518   aaatacctgtccaacatagagcttgttgtcacgtctgataatgatatagatgctggacct 577
             |||||||||||||| |||||||||| |||||||||||||||| | ||| |||||||||||
Sbjct: 81596 aaatacctgtccaatatagagcttgctgtcacgtctgataattacataaatgctggacct 81655

                                                                         
Query: 578   gccaacggttgaaggtggcggttgctccctagcacctacagttacacagaccacctcaac 637
             |||||| ||||||||||| ||||||||||||||||| ||||  |||||||||||||||| 
Sbjct: 81656 gccaacagttgaaggtgggggttgctccctagcacccacagcaacacagaccacctcaat 81715

                                      
Query: 638   ctgctctgagatgcttctcttgttg 662
             | | ||||||||||| || ||||||
Sbjct: 81716 cagttctgagatgctccttttgttg 81740
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>emb|AL662969.3|OSJN00169 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24,
             complete sequence
          Length = 164577

 Score =  200 bits (101), Expect = 4e-48
 Identities = 164/185 (88%)
 Strand = Plus / Plus

                                                                         
Query: 264   cgatgcttgccatctgccttgttggtgagcttaaaacctttcgagggtagctgatttatg 323
             |||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||
Sbjct: 23956 cgatgcttgccatctgccttgttgatgagcttgaaacctttcaaaggtagctgatttatg 24015

                                                                         
Query: 324   agaagagtctccagttggcacgcaacgctcttgccaggaaccacgatgtatagtattgtg 383
             |||||||| ||||||||||| |||| |||||| ||||| ||||  || |||| ||| |||
Sbjct: 24016 agaagagtttccagttggcatgcaatgctcttcccaggtaccaaaatatataatatcgtg 24075

                                                                         
Query: 384   gcatcttgcataccttccttggatctatgagcaccaagacggcccacgagatcatccgtc 443
             ||||| |||||||||||||| ||||| ||||||| ||| || ||||| ||||||||||||
Sbjct: 24076 gcatcctgcataccttccttcgatctgtgagcactaagtcgacccacaagatcatccgtc 24135

                  
Query: 444   tgcag 448
             |||||
Sbjct: 24136 tgcag 24140



 Score =  168 bits (85), Expect = 1e-38
 Identities = 130/145 (89%)
 Strand = Plus / Plus

                                                                         
Query: 518   aaatacctgtccaacatagagcttgttgtcacgtctgataatgatatagatgctggacct 577
             |||||||||||||| |||||||||| |||||||||||||||| | ||| |||||||||||
Sbjct: 24216 aaatacctgtccaatatagagcttgctgtcacgtctgataattacataaatgctggacct 24275

                                                                         
Query: 578   gccaacggttgaaggtggcggttgctccctagcacctacagttacacagaccacctcaac 637
             |||||| ||||||||||| ||||||||||||||||| ||||  |||||||||||||||| 
Sbjct: 24276 gccaacagttgaaggtgggggttgctccctagcacccacagcaacacagaccacctcaat 24335

                                      
Query: 638   ctgctctgagatgcttctcttgttg 662
             | | ||||||||||| || ||||||
Sbjct: 24336 cagttctgagatgctccttttgttg 24360
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  200 bits (101), Expect = 4e-48
 Identities = 164/185 (88%)
 Strand = Plus / Plus

                                                                            
Query: 264      cgatgcttgccatctgccttgttggtgagcttaaaacctttcgagggtagctgatttatg 323
                |||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||
Sbjct: 25297397 cgatgcttgccatctgccttgttgatgagcttgaaacctttcaaaggtagctgatttatg 25297456

                                                                            
Query: 324      agaagagtctccagttggcacgcaacgctcttgccaggaaccacgatgtatagtattgtg 383
                |||||||| ||||||||||| |||| |||||| ||||| ||||  || |||| ||| |||
Sbjct: 25297457 agaagagtttccagttggcatgcaatgctcttcccaggtaccaaaatatataatatcgtg 25297516

                                                                            
Query: 384      gcatcttgcataccttccttggatctatgagcaccaagacggcccacgagatcatccgtc 443
                ||||| |||||||||||||| ||||| ||||||| ||| || ||||| ||||||||||||
Sbjct: 25297517 gcatcctgcataccttccttcgatctgtgagcactaagtcgacccacaagatcatccgtc 25297576

                     
Query: 444      tgcag 448
                |||||
Sbjct: 25297577 tgcag 25297581



 Score =  168 bits (85), Expect = 1e-38
 Identities = 130/145 (89%)
 Strand = Plus / Plus

                                                                            
Query: 518      aaatacctgtccaacatagagcttgttgtcacgtctgataatgatatagatgctggacct 577
                |||||||||||||| |||||||||| |||||||||||||||| | ||| |||||||||||
Sbjct: 25297657 aaatacctgtccaatatagagcttgctgtcacgtctgataattacataaatgctggacct 25297716

                                                                            
Query: 578      gccaacggttgaaggtggcggttgctccctagcacctacagttacacagaccacctcaac 637
                |||||| ||||||||||| ||||||||||||||||| ||||  |||||||||||||||| 
Sbjct: 25297717 gccaacagttgaaggtgggggttgctccctagcacccacagcaacacagaccacctcaat 25297776

                                         
Query: 638      ctgctctgagatgcttctcttgttg 662
                | | ||||||||||| || ||||||
Sbjct: 25297777 cagttctgagatgctccttttgttg 25297801
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>ref|XM_473103.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2358

 Score =  194 bits (98), Expect = 3e-46
 Identities = 161/182 (88%)
 Strand = Plus / Minus

                                                                        
Query: 264  cgatgcttgccatctgccttgttggtgagcttaaaacctttcgagggtagctgatttatg 323
            |||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||
Sbjct: 2312 cgatgcttgccatctgccttgttgatgagcttgaaacctttcaaaggtagctgatttatg 2253

                                                                        
Query: 324  agaagagtctccagttggcacgcaacgctcttgccaggaaccacgatgtatagtattgtg 383
            |||||||| ||||||||||| |||| |||||| ||||| ||||  || |||| ||| |||
Sbjct: 2252 agaagagtttccagttggcatgcaatgctcttcccaggtaccaaaatatataatatcgtg 2193

                                                                        
Query: 384  gcatcttgcataccttccttggatctatgagcaccaagacggcccacgagatcatccgtc 443
            ||||| |||||||||||||| ||||| ||||||| ||| || ||||| ||||||||||||
Sbjct: 2192 gcatcctgcataccttccttcgatctgtgagcactaagtcgacccacaagatcatccgtc 2133

              
Query: 444  tg 445
            ||
Sbjct: 2132 tg 2131



 Score =  157 bits (79), Expect = 6e-35
 Identities = 124/139 (89%)
 Strand = Plus / Minus

                                                                        
Query: 524  ctgtccaacatagagcttgttgtcacgtctgataatgatatagatgctggacctgccaac 583
            |||||||| |||||||||| |||||||||||||||| | ||| |||||||||||||||||
Sbjct: 2133 ctgtccaatatagagcttgctgtcacgtctgataattacataaatgctggacctgccaac 2074

                                                                        
Query: 584  ggttgaaggtggcggttgctccctagcacctacagttacacagaccacctcaacctgctc 643
             ||||||||||| ||||||||||||||||| ||||  |||||||||||||||| | | ||
Sbjct: 2073 agttgaaggtgggggttgctccctagcacccacagcaacacagaccacctcaatcagttc 2014

                               
Query: 644  tgagatgcttctcttgttg 662
            ||||||||| || ||||||
Sbjct: 2013 tgagatgctccttttgttg 1995
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>dbj|AK067042.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090K16, full
            insert sequence
          Length = 3719

 Score =  194 bits (98), Expect = 3e-46
 Identities = 161/182 (88%)
 Strand = Plus / Minus

                                                                        
Query: 264  cgatgcttgccatctgccttgttggtgagcttaaaacctttcgagggtagctgatttatg 323
            |||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||
Sbjct: 3580 cgatgcttgccatctgccttgttgatgagcttgaaacctttcaaaggtagctgatttatg 3521

                                                                        
Query: 324  agaagagtctccagttggcacgcaacgctcttgccaggaaccacgatgtatagtattgtg 383
            |||||||| ||||||||||| |||| |||||| ||||| ||||  || |||| ||| |||
Sbjct: 3520 agaagagtttccagttggcatgcaatgctcttcccaggtaccaaaatatataatatcgtg 3461

                                                                        
Query: 384  gcatcttgcataccttccttggatctatgagcaccaagacggcccacgagatcatccgtc 443
            ||||| |||||||||||||| ||||| ||||||| ||| || ||||| ||||||||||||
Sbjct: 3460 gcatcctgcataccttccttcgatctgtgagcactaagtcgacccacaagatcatccgtc 3401

              
Query: 444  tg 445
            ||
Sbjct: 3400 tg 3399



 Score =  157 bits (79), Expect = 6e-35
 Identities = 124/139 (89%)
 Strand = Plus / Minus

                                                                        
Query: 524  ctgtccaacatagagcttgttgtcacgtctgataatgatatagatgctggacctgccaac 583
            |||||||| |||||||||| |||||||||||||||| | ||| |||||||||||||||||
Sbjct: 3401 ctgtccaatatagagcttgctgtcacgtctgataattacataaatgctggacctgccaac 3342

                                                                        
Query: 584  ggttgaaggtggcggttgctccctagcacctacagttacacagaccacctcaacctgctc 643
             ||||||||||| ||||||||||||||||| ||||  |||||||||||||||| | | ||
Sbjct: 3341 agttgaaggtgggggttgctccctagcacccacagcaacacagaccacctcaatcagttc 3282

                               
Query: 644  tgagatgcttctcttgttg 662
            ||||||||| || ||||||
Sbjct: 3281 tgagatgctccttttgttg 3263
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>gb|AY856370.1| Zea mays DNA mismatch repair protein (MSH1) mRNA, complete cds
          Length = 3642

 Score =  101 bits (51), Expect = 3e-18
 Identities = 117/139 (84%)
 Strand = Plus / Minus

                                                                        
Query: 524  ctgtccaacatagagcttgttgtcacgtctgataatgatatagatgctggacctgccaac 583
            |||||||||||||||| ||||||| | ||||||||| |  |||||||| || ||||||||
Sbjct: 3408 ctgtccaacatagagcctgttgtcgcttctgataatcacgtagatgctagatctgccaac 3349

                                                                        
Query: 584  ggttgaaggtggcggttgctccctagcacctacagttacacagaccacctcaacctgctc 643
             || ||||| || |||||||| |||||||||||||  || ||||||||||| ||| | ||
Sbjct: 3348 agtggaaggcggtggttgctctctagcacctacagcaacgcagaccacctcgaccagttc 3289

                               
Query: 644  tgagatgcttctcttgttg 662
            || |||||| || ||||||
Sbjct: 3288 tgggatgctacttttgttg 3270



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 104/124 (83%)
 Strand = Plus / Minus

                                                                        
Query: 252  ataccaaagttccgatgcttgccatctgccttgttggtgagcttaaaacctttcgagggt 311
            ||||| |||||||  ||||| || |||||||||||| ||||||| || ||  |||| || 
Sbjct: 3599 ataccgaagttcctgtgcttcccgtctgccttgttgatgagcttgaagcccctcgaaggg 3540

                                                                        
Query: 312  agctgatttatgagaagagtctccagttggcacgcaacgctcttgccaggaaccacgatg 371
            ||||| ||||||||||| || ||||| ||||| ||||||||||||||||| |||| || |
Sbjct: 3539 agctggtttatgagaagggtttccagctggcaggcaacgctcttgccagggaccaagacg 3480

                
Query: 372  tata 375
            ||||
Sbjct: 3479 tata 3476
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>ref|NM_001013397.1| Gallus gallus myosin, heavy polypeptide 1, skeletal muscle, adult
           (MYH1), mRNA
          Length = 5874

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 220 gcgcagccatggcttctccaga 241
           ||||||||||||||||||||||
Sbjct: 12  gcgcagccatggcttctccaga 33
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>gb|AY866434.1| Lycopersicon esculentum DNA mismatch repair protein (MSH1) mRNA,
            partial cds
          Length = 3373

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 315  tgatttatgagaagagtctccagttggcacgcaacgctcttgccag 360
            |||||||| |||||||| |||| |||||| || | |||||||||||
Sbjct: 3311 tgatttattagaagagtttccaattggcaggcgatgctcttgccag 3266
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>gb|AC079782.6| Homo sapiens BAC clone RP11-385J23 from 2, complete sequence
          Length = 85411

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 475   cttagacaaaggaacagaagaa 496
             ||||||||||||||||||||||
Sbjct: 51020 cttagacaaaggaacagaagaa 50999
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>gb|U87231.1|GGU87231 Gallus gallus myosin heavy chain mRNA, complete cds
          Length = 5874

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 220 gcgcagccatggcttctccaga 241
           ||||||||||||||||||||||
Sbjct: 12  gcgcagccatggcttctccaga 33
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>gb|M13512.1|CHKMYHB Chicken fast-white myosin heavy chain (adult isoform) gene, exons 2,
            3, and 4, clone N116
          Length = 1856

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 220  gcgcagccatggcttctccaga 241
            ||||||||||||||||||||||
Sbjct: 1052 gcgcagccatggcttctccaga 1073
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>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence
          Length = 210819

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 125    aaaagacaaaaaacagataaggaaa 149
              |||| ||||||||||||||||||||
Sbjct: 182205 aaaaaacaaaaaacagataaggaaa 182181
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>gb|AC132351.3| Mus musculus BAC clone RP24-95F24 from chromosome 18, complete sequence
          Length = 186726

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 125   aaaagacaaaaaacagataaggaaa 149
             |||| ||||||||||||||||||||
Sbjct: 77245 aaaaaacaaaaaacagataaggaaa 77221
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 130    acaaaaaacagataaggaaatcaaa 154
              |||||||||||||||| ||||||||
Sbjct: 575249 acaaaaaacagataagcaaatcaaa 575225
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>gb|DQ496100.1| Homo sapiens hephaestin (HEPH) gene, complete cds
          Length = 108572

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 551   tctgataatgatatagatgctgga 574
             ||||||||||||||||||| ||||
Sbjct: 79204 tctgataatgatatagatgttgga 79227
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>gb|AC147026.2| Mus musculus BAC clone RP23-249A22 from chromosome 19, complete sequence
          Length = 190038

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 528    ccaacatagagcttgttgtcacgtctgataat 559
              |||| ||||||||||| |||| ||||||||||
Sbjct: 156732 ccaatatagagcttgtggtcaagtctgataat 156763
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>gb|AC161381.2| Mus musculus BAC clone RP23-166L22 from chromosome 8, complete sequence
          Length = 233354

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     ttccttacacatggtagaaa 38
              ||||||||||||||||||||
Sbjct: 200484 ttccttacacatggtagaaa 200503
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>ref|XM_849583.1| PREDICTED: Canis familiaris similar to Rho-related GTP-binding
           protein RhoD (Rho-related protein HP1) (RhoHP1)
           (LOC611862), mRNA
          Length = 760

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 155 ggtgaagctccactcccctttggc 178
           |||| |||||||||||||||||||
Sbjct: 81  ggtgtagctccactcccctttggc 58
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>gb|AC003108.1|HUAC003108 Human Chromosome 16 BAC clone CIT987SK-327O24, complete sequence
          Length = 164564

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    acaaaaaacagataaggaaa 149
              ||||||||||||||||||||
Sbjct: 122244 acaaaaaacagataaggaaa 122263
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>gb|AC126674.3| Mus musculus BAC clone RP23-364B6 from chromosome 19, complete
            sequence
          Length = 203282

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 528  ccaacatagagcttgttgtcacgtctgataat 559
            |||| ||||||||||| |||| ||||||||||
Sbjct: 2909 ccaatatagagcttgtggtcaagtctgataat 2940
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>emb|AL355480.22| Human DNA sequence from clone RP4-697E16 on chromosome 1 Contains the
             5' end of the PRDX1 gene for peroxiredoxin 1, a
             high-mobility group box 1 (HMGB1) pseudogene, the AKR1A1
             gene for aldo-keto reductase family 1 member A1 (aldehyde
             reductase), the NASP gene for nuclear autoantigenic sperm
             protein (histone-binding) and a novel gene (FLJ33084),
             complete sequence
          Length = 106171

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   aacagataaggaaatcaaag 155
             ||||||||||||||||||||
Sbjct: 99844 aacagataaggaaatcaaag 99825
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>gb|AY135565.1| Betula pendula clone fad7 omega-3 fatty acid desaturase mRNA,
            complete cds; nuclear gene for plastid product
          Length = 1703

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   atattaccaatcagacaaaa 88
            ||||||||||||||||||||
Sbjct: 1368 atattaccaatcagacaaaa 1387
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>emb|AL030998.1|HS466I8 Human DNA sequence from clone RP3-466I8 on chromosome Xq11.1-13.2
             Contains the 5' end of the HEPH gene for hephaestin,
             complete sequence
          Length = 118226

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 551   tctgataatgatatagatgctgga 574
             ||||||||||||||||||| ||||
Sbjct: 11834 tctgataatgatatagatgttgga 11811
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>ref|NM_001030933.1| Gallus gallus similar to PSL1; presenilin-like protein 1 (LOC420056),
            mRNA
          Length = 5487

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 326  aagagtctccagttggcacg 345
            ||||||||||||||||||||
Sbjct: 3422 aagagtctccagttggcacg 3441
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>gb|AC155807.3| Mus musculus BAC clone RP24-303N21 from chromosome 8, complete sequence
          Length = 167996

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     ttccttacacatggtagaaa 38
              ||||||||||||||||||||
Sbjct: 151429 ttccttacacatggtagaaa 151410
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>emb|AJ851767.1| Gallus gallus mRNA for hypothetical protein, clone 29c5
          Length = 5487

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 326  aagagtctccagttggcacg 345
            ||||||||||||||||||||
Sbjct: 3422 aagagtctccagttggcacg 3441
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>emb|AJ720217.1| Gallus gallus mRNA for hypothetical protein, clone 12n17
          Length = 4774

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 482  aaaggaacagaagaatacat 501
            ||||||||||||||||||||
Sbjct: 2363 aaaggaacagaagaatacat 2344
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>gb|AF272033.1| Gallus gallus fast myosin heavy chain isoform 2 mRNA, complete cds
          Length = 6067

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 gcagccatggcttctccaga 241
           ||||||||||||||||||||
Sbjct: 100 gcagccatggcttctccaga 119
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>dbj|AK057646.1| Homo sapiens cDNA FLJ33084 fis, clone TRACH2000411
          Length = 2322

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  aacagataaggaaatcaaag 155
            ||||||||||||||||||||
Sbjct: 1914 aacagataaggaaatcaaag 1933
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>gb|AC158354.2| Mus musculus BAC clone RP24-160P23 from chromosome 12, complete
             sequence
          Length = 178034

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   aaaagacaaaaaacagataa 144
             ||||||||||||||||||||
Sbjct: 98669 aaaagacaaaaaacagataa 98688
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 545     gtcacgtctgataatgatat 564
               ||||||||||||||||||||
Sbjct: 6517220 gtcacgtctgataatgatat 6517201
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>gb|AC012621.8| Homo sapiens chromosome 16 clone CTD-2055J8, complete sequence
          Length = 145023

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   acaaaaaacagataaggaaa 149
             ||||||||||||||||||||
Sbjct: 97928 acaaaaaacagataaggaaa 97947
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>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib
          Length = 2013089

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 477     tagacaaaggaacagaagaa 496
               ||||||||||||||||||||
Sbjct: 1629171 tagacaaaggaacagaagaa 1629152
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>ref|NM_204228.1| Gallus gallus myosin, heavy polypeptide 1, skeletal muscle, adult
           (MYH1), mRNA
          Length = 6067

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 gcagccatggcttctccaga 241
           ||||||||||||||||||||
Sbjct: 100 gcagccatggcttctccaga 119
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 545     gtcacgtctgataatgatat 564
               ||||||||||||||||||||
Sbjct: 6517095 gtcacgtctgataatgatat 6517076
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>emb|AL954156.3|CNS08CCU Oryza sativa chromosome 12, . BAC OSJNBa0096K13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138508

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 545   gtcacgtctgataatgatat 564
             ||||||||||||||||||||
Sbjct: 70360 gtcacgtctgataatgatat 70341
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>gb|AC113282.19| Mus musculus chromosome 1, clone RP23-393I20, complete sequence
          Length = 183505

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   aaaagacaaaaaacagataa 144
             ||||||||||||||||||||
Sbjct: 13963 aaaagacaaaaaacagataa 13982
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>gb|M13515.1|CHKMYHD Chicken fast white myosin heavy chain gene, exons 1, 2 and 3, clone
           N124
          Length = 1459

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 222 gcagccatggcttctccaga 241
           ||||||||||||||||||||
Sbjct: 706 gcagccatggcttctccaga 725


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,664,000
Number of Sequences: 3902068
Number of extensions: 5664000
Number of successful extensions: 104885
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104719
Number of HSP's gapped (non-prelim): 166
length of query: 662
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 639
effective length of database: 17,143,297,704
effective search space: 10954567232856
effective search space used: 10954567232856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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