ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7h14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ606019.1| Triticum aestivum partial mRNA for putative cycl... 121 3e-24
2gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
4dbj|AK107486.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
5ref|XM_475474.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
6gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.033
7gb|AC012499.8| Homo sapiens BAC clone RP11-428I14 from 2, comple... 46 0.13
8gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, comp... 42 2.1
9gb|AC068066.3| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 2.1
10gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, comp... 42 2.1
11emb|AL590012.6| Human DNA sequence from clone RP11-40I8 on chrom... 42 2.1
12emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on ch... 42 2.1
13gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, comp... 42 2.1
14emb|CR628362.8| Zebrafish DNA sequence from clone DKEY-74A12 in ... 42 2.1
15emb|AL646050.7| Mouse DNA sequence from clone RP23-460G5 on chro... 42 2.1
16gb|AC090733.7| Homo sapiens chromosome 8, clone RP11-108D15, com... 42 2.1
17gb|AC068700.5| Homo sapiens chromosome 8, clone RP11-594N15, com... 42 2.1
18emb|AL954676.22| Zebrafish DNA sequence from clone CH211-86M2, c... 42 2.1
19dbj|AB016881.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.1
20emb|CR387935.16| Zebrafish DNA sequence from clone CH211-212O1 i... 42 2.1
21emb|AJ270774.1|HSA270774 Homo sapiens partial TCF-4 gene for T-c... 42 2.1
22gb|AC140406.3| Mus musculus BAC clone RP23-141L18 from 14, compl... 42 2.1
23gb|AC118592.7| Mus musculus chromosome 7, clone RP24-463B5, comp... 40 8.1
24gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.1
25gb|AC007576.3| Arabidopsis thaliana chromosome I BAC F7A19 genom... 40 8.1
26gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete... 40 8.1
27emb|CR388129.11| Zebrafish DNA sequence from clone CH211-281L24 ... 40 8.1
28gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
29gb|AC159151.3| Equus caballus clone CH241-268N6, complete sequence 40 8.1
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
31gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence 40 8.1
32gb|AF165147.1|AF165147 Homo sapiens chromosome 21q22.1, PAC I228... 40 8.1
33emb|BX294392.3| Zebrafish DNA sequence from clone CH211-262O24 i... 40 8.1
34emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on ch... 40 8.1
35emb|AL163247.2|HS21C047 Homo sapiens chromosome 21 segment HS21C047 40 8.1
36emb|BX649416.15| Zebrafish DNA sequence from clone DKEY-1B17 in ... 40 8.1
37emb|CR735101.11| Zebrafish DNA sequence from clone DKEY-211C15 i... 40 8.1
38gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
39gb|AC133515.3| Mus musculus BAC clone RP23-236E15 from 1, comple... 40 8.1
40emb|AL929188.6| Zebrafish DNA sequence from clone CH211-273O6 in... 40 8.1
41gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 8.1
42gb|AC078872.13| Homo sapiens 12q BAC RP11-542G14 (Roswell Park C... 40 8.1 
>emb|AJ606019.1| Triticum aestivum partial mRNA for putative cyclin (ibZm gene)
          Length = 452

 Score =  121 bits (61), Expect = 3e-24
 Identities = 115/133 (86%)
 Strand = Plus / Minus

                                                                       
Query: 337 cccgcgctgctggaggaacaactacgctgttcttgcatggattggcttgggccttcttca 396
           |||||||||||||||||||| |||||| ||||||  |||||| ||| |||||||||| ||
Sbjct: 244 cccgcgctgctggaggaacagctacgccgttcttagatggatcggcctgggccttctgca 185

                                                                       
Query: 397 agagctgagcgcccaacctcctggtgagtggtcgattggtccctgccggtagctggatct 456
           |||||||||| || || |||||||||| ||| |||||  |||| ||||| ||||||||||
Sbjct: 184 agagctgagcaccgaagctcctggtgattgggcgatttatccccgccggcagctggatct 125

                        
Query: 457 tgctgtcgtggac 469
           ||| |||| ||||
Sbjct: 124 tgccgtcgaggac 112



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 51/60 (85%), Gaps = 1/60 (1%)
 Strand = Plus / Minus

                                                                       
Query: 463 cgtggacaacgttgccaatgtccc-gatcacgtgcatgtttcctcccgcaccagggcggc 521
           ||||||| |||||||| ||||||| || |||  || |||| ||||||||||| |||||||
Sbjct: 106 cgtggacgacgttgccgatgtccccgagcacccgcctgttccctcccgcaccggggcggc 47
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>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06,
              complete sequence
          Length = 187651

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 399    agctgagcgcccaacctcctggtgagtggtcgattggtccctgccggtagctggatcttg 458
              ||||| ||||| || |||||||||| ||| |||||| ||||  |||| ||||||||||||
Sbjct: 164951 agctgggcgccgaagctcctggtgattgggcgattgatcccctccggcagctggatcttg 164892

                  
Query: 459    ctgt 462
              ||||
Sbjct: 164891 ctgt 164888
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 399      agctgagcgcccaacctcctggtgagtggtcgattggtccctgccggtagctggatcttg 458
                ||||| ||||| || |||||||||| ||| |||||| ||||  |||| ||||||||||||
Sbjct: 24096462 agctgggcgccgaagctcctggtgattgggcgattgatcccctccggcagctggatcttg 24096403

                    
Query: 459      ctgt 462
                ||||
Sbjct: 24096402 ctgt 24096399



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                            
Query: 399      agctgagcgcccaacctcctggtgagtggtcgattggtccctgccggtagctggatcttg 458
                ||||| ||||| || ||||||||||  || |||||| ||||  |||| ||||||||||||
Sbjct: 24530427 agctgggcgccgaagctcctggtgatggggcgattgatcccctccggcagctggatcttg 24530486

                    
Query: 459      ctgt 462
                ||||
Sbjct: 24530487 ctgt 24530490
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>dbj|AK107486.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-C09, full
            insert sequence
          Length = 3074

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                        
Query: 399  agctgagcgcccaacctcctggtgagtggtcgattggtccctgccggtagctggatcttg 458
            ||||| ||||| || |||||||||| ||| |||||| ||||  |||| ||||||||||||
Sbjct: 1823 agctgggcgccgaagctcctggtgattgggcgattgatcccctccggcagctggatcttg 1882

                
Query: 459  ctgt 462
            ||||
Sbjct: 1883 ctgt 1886
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>ref|XM_475474.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1566

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 399 agctgagcgcccaacctcctggtgagtggtcgattggtccctgccggtagctggatcttg 458
           ||||| ||||| || |||||||||| ||| |||||| ||||  |||| ||||||||||||
Sbjct: 416 agctgggcgccgaagctcctggtgattgggcgattgatcccctccggcagctggatcttg 357

                 
Query: 459 ctgtcg 464
           | ||||
Sbjct: 356 ccgtcg 351
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>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017K09, complete sequence
          Length = 155525

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 399   agctgagcgcccaacctcctggtgagtggtcgattggtccctgccggtagctggatcttg 458
             ||||| ||||| || ||||||||||  || |||||| ||||  |||| ||||||||||||
Sbjct: 44609 agctgggcgccgaagctcctggtgatggggcgattgatcccctccggcagctggatcttg 44668

                 
Query: 459   ctgt 462
             ||||
Sbjct: 44669 ctgt 44672
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>gb|AC012499.8| Homo sapiens BAC clone RP11-428I14 from 2, complete sequence
          Length = 183436

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 87    gttgtactttgtcactcttgagt 109
             |||||||||||||||||||||||
Sbjct: 82127 gttgtactttgtcactcttgagt 82105
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>gb|AC113328.5| Mus musculus chromosome 3, clone RP23-456E2, complete sequence
          Length = 168421

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 307   attgcttcttgtttactggcttgag 331
             |||||||||||||||| ||||||||
Sbjct: 27692 attgcttcttgtttacaggcttgag 27668
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>gb|AC068066.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-414I9, complete
              sequence
          Length = 184879

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     gttgaagtggtttctttaaga 77
              |||||||||||||||||||||
Sbjct: 170629 gttgaagtggtttctttaaga 170649
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>gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, complete sequence
          Length = 231059

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     gttgaagtggtttctttaaga 77
              |||||||||||||||||||||
Sbjct: 163216 gttgaagtggtttctttaaga 163196
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>emb|AL590012.6| Human DNA sequence from clone RP11-40I8 on chromosome X, complete
             sequence
          Length = 106773

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 237   tattttatactttgtatcttc 257
             |||||||||||||||||||||
Sbjct: 48776 tattttatactttgtatcttc 48796
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>emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on chromosome 10 Contains the
             3' end of the TCF7L2 gene for transcription factor 7-like
             2 (T-cell specific, HMG-box), complete sequence
          Length = 183815

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 379   tggcttgggccttcttcaaga 399
             |||||||||||||||||||||
Sbjct: 24817 tggcttgggccttcttcaaga 24837
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>gb|AC164153.2| Mus musculus chromosome 3, clone RP23-370M4, complete sequence
          Length = 187100

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 307   attgcttcttgtttactggcttgag 331
             |||||||||||||||| ||||||||
Sbjct: 49147 attgcttcttgtttacaggcttgag 49123
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>emb|CR628362.8| Zebrafish DNA sequence from clone DKEY-74A12 in linkage group 18,
             complete sequence
          Length = 200732

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    aagaaaatggcatgttgtact 94
             |||||||||||||||||||||
Sbjct: 51113 aagaaaatggcatgttgtact 51133
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>emb|AL646050.7| Mouse DNA sequence from clone RP23-460G5 on chromosome 11 Contains a
             ribosomal protein L7 (Rpl7) pseudogene and a CpG island,
             complete sequence
          Length = 164018

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 234   agttattttatactttgtatcttct 258
             |||||||||||||||||||| ||||
Sbjct: 78918 agttattttatactttgtattttct 78894
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>gb|AC090733.7| Homo sapiens chromosome 8, clone RP11-108D15, complete sequence
          Length = 165456

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 66   gtttctttaagaaaatggcat 86
            |||||||||||||||||||||
Sbjct: 6108 gtttctttaagaaaatggcat 6128
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>gb|AC068700.5| Homo sapiens chromosome 8, clone RP11-594N15, complete sequence
          Length = 182860

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 66    gtttctttaagaaaatggcat 86
             |||||||||||||||||||||
Sbjct: 16272 gtttctttaagaaaatggcat 16252
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>emb|AL954676.22| Zebrafish DNA sequence from clone CH211-86M2, complete sequence
          Length = 160611

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 229   aatgaagttattttatacttt 249
             |||||||||||||||||||||
Sbjct: 80860 aatgaagttattttatacttt 80840
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>dbj|AB016881.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC17
          Length = 27263

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 238   attttatactttgtatcttct 258
             |||||||||||||||||||||
Sbjct: 19999 attttatactttgtatcttct 19979
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>emb|CR387935.16| Zebrafish DNA sequence from clone CH211-212O1 in linkage group 18,
              complete sequence
          Length = 152685

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 74     aagaaaatggcatgttgtact 94
              |||||||||||||||||||||
Sbjct: 141571 aagaaaatggcatgttgtact 141551
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>emb|AJ270774.1|HSA270774 Homo sapiens partial TCF-4 gene for T-cell transcription factor-4,
             exons 6-11
          Length = 24413

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 379   tggcttgggccttcttcaaga 399
             |||||||||||||||||||||
Sbjct: 18770 tggcttgggccttcttcaaga 18790
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>gb|AC140406.3| Mus musculus BAC clone RP23-141L18 from 14, complete sequence
          Length = 213612

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     gtttctttaagaaaatggcat 86
              |||||||||||||||||||||
Sbjct: 124998 gtttctttaagaaaatggcat 124978
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>gb|AC118592.7| Mus musculus chromosome 7, clone RP24-463B5, complete sequence
          Length = 134114

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   cttgggccttcttcaagagc 401
             ||||||||||||||||||||
Sbjct: 36870 cttgggccttcttcaagagc 36889
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>gb|AC079957.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-144I17, complete
             sequence
          Length = 196474

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 259   attttggatccagagttcat 278
             ||||||||||||||||||||
Sbjct: 42077 attttggatccagagttcat 42058
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>gb|AC007576.3| Arabidopsis thaliana chromosome I BAC F7A19 genomic sequence, complete
             sequence
          Length = 112126

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ctacatacaaaagttgaagt 64
             ||||||||||||||||||||
Sbjct: 92331 ctacatacaaaagttgaagt 92350
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>gb|AC098723.3| Mus musculus BAC clone RP23-3D10 from 7, complete sequence
          Length = 227968

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   cttgggccttcttcaagagc 401
             ||||||||||||||||||||
Sbjct: 56189 cttgggccttcttcaagagc 56170
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>emb|CR388129.11| Zebrafish DNA sequence from clone CH211-281L24 in linkage group 15,
             complete sequence
          Length = 96262

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    tttaagaaaatggcatgttgtact 94
             ||||||||||||||||||| ||||
Sbjct: 66379 tttaagaaaatggcatgttttact 66402
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>gb|AC135643.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0023F01, complete sequence
          Length = 145009

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     acaaaagttgaagtggtttc 70
              ||||||||||||||||||||
Sbjct: 114519 acaaaagttgaagtggtttc 114538
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>gb|AC159151.3| Equus caballus clone CH241-268N6, complete sequence
          Length = 123244

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   actggcttcaagtaccactt 191
             ||||||||||||||||||||
Sbjct: 15011 actggcttcaagtaccactt 15030
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       acaaaagttgaagtggtttc 70
                ||||||||||||||||||||
Sbjct: 26475201 acaaaagttgaagtggtttc 26475182
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>gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence
          Length = 171209

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    actggcttcaagtaccactt 191
              ||||||||||||||||||||
Sbjct: 166178 actggcttcaagtaccactt 166197
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>gb|AF165147.1|AF165147 Homo sapiens chromosome 21q22.1, PAC I2280, complete sequence
          Length = 146735

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   cacaattagcatccttcatg 164
             ||||||||||||||||||||
Sbjct: 46018 cacaattagcatccttcatg 45999
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>emb|BX294392.3| Zebrafish DNA sequence from clone CH211-262O24 in linkage group 23,
             complete sequence
          Length = 141252

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    tttaagaaaatggcatgttgtact 94
             ||||||||||||||||||| ||||
Sbjct: 83086 tttaagaaaatggcatgttttact 83063
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>emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on chromosome 2, complete
              sequence
          Length = 219412

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     tgtactttgtcactcttgag 108
              ||||||||||||||||||||
Sbjct: 164960 tgtactttgtcactcttgag 164941
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>emb|AL163247.2|HS21C047 Homo sapiens chromosome 21 segment HS21C047
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    cacaattagcatccttcatg 164
              ||||||||||||||||||||
Sbjct: 164496 cacaattagcatccttcatg 164477
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>emb|BX649416.15| Zebrafish DNA sequence from clone DKEY-1B17 in linkage group 22, complete
              sequence
          Length = 161525

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 36     cacaacatactacatacaaaagtt 59
              |||||||||||||| |||||||||
Sbjct: 140062 cacaacatactacagacaaaagtt 140039
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>emb|CR735101.11| Zebrafish DNA sequence from clone DKEY-211C15 in linkage group 19,
             complete sequence
          Length = 32655

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 74    aagaaaatggcatgttgtactttg 97
             |||||||||||||||| |||||||
Sbjct: 19155 aagaaaatggcatgttttactttg 19132
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       acaaaagttgaagtggtttc 70
                ||||||||||||||||||||
Sbjct: 26800465 acaaaagttgaagtggtttc 26800446
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>gb|AC133515.3| Mus musculus BAC clone RP23-236E15 from 1, complete sequence
          Length = 175639

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 95     ttgtcactcttgagtggcaa 114
              ||||||||||||||||||||
Sbjct: 144180 ttgtcactcttgagtggcaa 144199
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>emb|AL929188.6| Zebrafish DNA sequence from clone CH211-273O6 in linkage group 23,
              complete sequence
          Length = 150865

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     tttaagaaaatggcatgttgtact 94
              ||||||||||||||||||| ||||
Sbjct: 113801 tttaagaaaatggcatgttttact 113778
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 172     actggcttcaagtaccactt 191
               ||||||||||||||||||||
Sbjct: 1798822 actggcttcaagtaccactt 1798841
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>gb|AC078872.13| Homo sapiens 12q BAC RP11-542G14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 166585

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 240   tttatactttgtatcttctatttt 263
             ||||| ||||||||||||||||||
Sbjct: 97453 tttattctttgtatcttctatttt 97430


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,330,734
Number of Sequences: 3902068
Number of extensions: 5330734
Number of successful extensions: 113634
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113432
Number of HSP's gapped (non-prelim): 202
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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