>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1062590

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 187     ttgttcttgattgttttttcaa 208
               ||||||||||||||||||||||
Sbjct: 1010169 ttgttcttgattgttttttcaa 1010190

>gb|AC168980.1| Mus musculus BAC clone RP24-484L12 from chromosome 17, complete sequence
          Length = 192097

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 186    attgttcttgattgttttttc 206
              |||||||||||||||||||||
Sbjct: 186240 attgttcttgattgttttttc 186260

>emb|AL445225.9| Human DNA sequence from clone RP11-4D11 on chromosome 13, complete
             sequence
          Length = 171764

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 190   ttcttgattgttttttcaact 210
             |||||||||||||||||||||
Sbjct: 45692 ttcttgattgttttttcaact 45712

>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 179     ggtaggtattgttcttgattgtttt 203
               |||||||||||||||||||| ||||
Sbjct: 1656017 ggtaggtattgttcttgattatttt 1656041

>emb|AL117204.1|CEY116A8C Caenorhabditis elegans YAC Y116A8C, complete sequence
          Length = 260341

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 419    ctgatttttggtttgatctgg 439
              |||||||||||||||||||||
Sbjct: 149851 ctgatttttggtttgatctgg 149831

>gb|AC133510.3| Mus musculus BAC clone RP23-409B11 from 8, complete sequence
          Length = 195449

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 38     tctcaatgcttaatctgtaag 58
              |||||||||||||||||||||
Sbjct: 169889 tctcaatgcttaatctgtaag 169909

>gb|AC153581.18| Mus musculus 6 BAC RP23-111F17 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 208262

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 329  ttgtttggatccctttcccttttg 352
            |||| |||||||||||||||||||
Sbjct: 9700 ttgtctggatccctttcccttttg 9723

>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10,
             complete sequence
          Length = 134183

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 411   tccttgtgctgatttttggt 430
             ||||||||||||||||||||
Sbjct: 39203 tccttgtgctgatttttggt 39184

>gb|AC125275.8| Mus musculus chromosome 7, clone RP24-165E9, complete sequence
          Length = 218429

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 177    ttggtaggtattgttcttgattgt 200
              ||||||||||||| ||||||||||
Sbjct: 213303 ttggtaggtattgatcttgattgt 213326

>gb|AC116515.11| Mus musculus chromosome 7, clone RP24-331B9, complete sequence
          Length = 133179

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 177   ttggtaggtattgttcttgattgt 200
             ||||||||||||| ||||||||||
Sbjct: 54018 ttggtaggtattgatcttgattgt 54041

>gb|AC125464.4| Mus musculus BAC clone RP23-113C9 from 14, complete sequence
          Length = 203804

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 185   tattgttcttgattgttttttcaa 208
             |||| |||||||||||||||||||
Sbjct: 64737 tattcttcttgattgttttttcaa 64760

>gb|AC073418.6| Homo sapiens BAC clone RP11-334C6 from 7, complete sequence
          Length = 83743

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 578   agcagcacctttgccactgtctgc 601
             |||||||||||||||||| |||||
Sbjct: 38369 agcagcacctttgccactttctgc 38392

>gb|AC116120.6| Mus musculus chromosome 6, clone RP23-78P7, complete sequence
          Length = 174411

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 329  ttgtttggatccctttcccttttg 352
            |||| |||||||||||||||||||
Sbjct: 9295 ttgtctggatccctttcccttttg 9272

>gb|AC107789.7| Mus musculus chromosome 1, clone RP23-409K18, complete sequence
          Length = 242347

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 185    tattgttcttgattgttttttcaa 208
              |||||||||||||||| |||||||
Sbjct: 201051 tattgttcttgattgtattttcaa 201028

>emb|BX664735.7| Human DNA sequence from clone RP11-665E4 on chromosome 9 Contains the 5'
              end of the gene for a novel protein similar to contactin
              associated protein-like 3 (CNTNAP3) and a CpG island,
              complete sequence
          Length = 187005

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    tttttcaactaggctgcttt 220
              ||||||||||||||||||||
Sbjct: 183359 tttttcaactaggctgcttt 183340

>emb|BX649569.5| Human DNA sequence from clone RP11-204I2 on chromosome 9 Contains part
             of the gene for a novel protein similar to contactin
             associated protein-like 3 (CNTNAP3), complete sequence
          Length = 162657

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 201   tttttcaactaggctgcttt 220
             ||||||||||||||||||||
Sbjct: 74650 tttttcaactaggctgcttt 74669

>emb|AL591850.4| Human DNA sequence from clone RP11-113N4 on chromosome 10 Contains part
             of a novel gene (FLJ13031) (FLJ40349), complete sequence
          Length = 30511

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   gtttggatccctttcccttt 350
             ||||||||||||||||||||
Sbjct: 16744 gtttggatccctttcccttt 16725

>emb|AL450105.17| Human DNA sequence from clone RP11-519C17 on chromosome 9 Contains the 5'
              UTR of the gene for a novel protein similar to basonuclin
              (BNC) (FLJ34928) and a CpG island, complete sequence
          Length = 161506

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     tgtaagctattaagttagct 72
              ||||||||||||||||||||
Sbjct: 140654 tgtaagctattaagttagct 140673

>emb|AL162233.14| Human DNA sequence from clone RP11-292B8 on chromosome 9 Contains a
             pseudogene similar to part of contactin associated
             protein-like 3 (CNTNAP3), an RNA binding motif protein 17
             (RBM17) pseudogene and a CpG island, complete sequence
          Length = 179833

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   tttttcaactaggctgcttt 220
             ||||||||||||||||||||
Sbjct: 67754 tttttcaactaggctgcttt 67735

>gb|AC137080.13| Medicago truncatula clone mth2-9a7, complete sequence
          Length = 129121

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   tgttcttgattgttttttca 207
             ||||||||||||||||||||
Sbjct: 25629 tgttcttgattgttttttca 25610

>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 373     caaggacgacagcaacatca 392
               ||||||||||||||||||||
Sbjct: 5966920 caaggacgacagcaacatca 5966901

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 10      tcttaaagtagaagagatct 29
               ||||||||||||||||||||
Sbjct: 5163389 tcttaaagtagaagagatct 5163408

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 411      tccttgtgctgatttttggt 430
                ||||||||||||||||||||
Sbjct: 16540464 tccttgtgctgatttttggt 16540445

>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1715_A07
          Length = 130907

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tcttaaagtagaagagatct 29
             ||||||||||||||||||||
Sbjct: 30103 tcttaaagtagaagagatct 30122

>dbj|AP003743.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1118_E12
          Length = 119691

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     tcttaaagtagaagagatct 29
              ||||||||||||||||||||
Sbjct: 119556 tcttaaagtagaagagatct 119575

>emb|BX005035.9| Human DNA sequence from clone RP11-133G22 on chromosome 9, complete
             sequence
          Length = 146143

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   tttttcaactaggctgcttt 220
             ||||||||||||||||||||
Sbjct: 71565 tttttcaactaggctgcttt 71546


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,285,410
Number of Sequences: 3902068
Number of extensions: 5285410
Number of successful extensions: 92496
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92382
Number of HSP's gapped (non-prelim): 114
length of query: 601
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 578
effective length of database: 17,143,297,704
effective search space: 9908826072912
effective search space used: 9908826072912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)