>YD52_SCHPO (Q10307) Hypothetical protein C6C3.02c in chromosome I|
          Length = 172

 Score = 36.6 bits (83), Expect = 0.067
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 23/99 (23%)
 Frame = -2

Query: 461 GTGSAMAHRAVDAVMG----------------PRTIQHETVVSEAAASMTP-------MD 351
           G GSA+ H     + G                P++    +V   A  S  P       + 
Sbjct: 69  GIGSAIGHTVGSVITGGFSGSGSNNAPADTSVPQSSYSNSVPEAAYGSAPPSTFASSAIS 128

Query: 350 NAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECR 234
             A + C   +K F DCIN +  + S+C +YL+ L  C+
Sbjct: 129 EEAKNACKGDAKMFADCINEH--EFSQCSYYLEQLKACQ 165

>YHR6_YEAST (P38824) Hypothetical 17.3 kDa protein in ERP5-ORC6 intergenic|
           region
          Length = 151

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -2

Query: 353 DNAADDKCGNPSKAFQDCINHYGSDISKCQFYLDMLNECRR 231
           D+   D C   SK    C+     D SKCQ Y D   EC++
Sbjct: 97  DSQYYDPCEESSKLSFQCLERNDYDRSKCQEYFDAYRECKK 137

>DCUP_PROMM (Q7V8B4) Uroporphyrinogen decarboxylase (EC 4.1.1.37) (URO-D) (UPD)|
          Length = 352

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -2

Query: 473 GMAFGTGSAMAHRAVDAVMGPRTIQHETVVSEAAASMTPMDNA 345
           G+ FGT  A+  R VDAV   R  +H   +       TP DNA
Sbjct: 292 GLLFGTPEAIRERIVDAVRKARGRRHILNLGHGILPGTPEDNA 334

>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = +3

Query: 381 RHNSLMLNGTGTHHSVNSPVRHSTASTESHALSNSGPNSAHDTATAALGSS 533
           RHN   L+G  T  S  S  R  ++ + SH+ S+S  +S+H  A++ + SS
Sbjct: 433 RHN---LHGRSTTSSSRSHSRSPSSYSSSHSSSSSSHSSSHSHASSPVQSS 480

>YQ5B_CAEEL (Q09254) Hypothetical protein C16C10.11|
          Length = 154

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
 Frame = -2

Query: 455 GSAMAHRAVDAVMGPRTIQHETVVSEAAASM-TPMDNAADDKCGNPSKAFQDCINHYGSD 279
           GSA+ H       G  +   E   + AAA    P  +     C    + F DC  +  SD
Sbjct: 77  GSAVGHAVGGMFTGGGSSHAEQAPAAAAAPAGAPQASGYSQPCEFEWRQFVDCAQNQ-SD 135

Query: 278 ISKCQFYLDMLNECR 234
           +S C  + D+  +C+
Sbjct: 136 VSLCNGFNDIFKQCK 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,049,519
Number of Sequences: 219361
Number of extensions: 1187986
Number of successful extensions: 3378
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3374
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)