ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal23l01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLSB_PHAVU (Q43822) Glycerol-3-phosphate acyltransferase, chloro... 76 9e-14
2PLSB_SPIOL (Q43869) Glycerol-3-phosphate acyltransferase, chloro... 75 2e-13
3PLSB_PEA (P30706) Glycerol-3-phosphate acyltransferase, chloropl... 75 2e-13
4PLSB_ARATH (Q43307) Glycerol-3-phosphate acyltransferase, chloro... 74 3e-13
5PLSB_CARTI (Q42713) Glycerol-3-phosphate acyltransferase, chloro... 70 6e-12
6PLSB_CUCMO (P10349) Glycerol-3-phosphate acyltransferase, chloro... 67 7e-11
7PLSB_CUCSA (Q39639) Glycerol-3-phosphate acyltransferase, chloro... 65 2e-10
8DPO1_MYCLE (P46835) DNA polymerase I (EC 2.7.7.7) (POL I) 30 5.6

>PLSB_PHAVU (Q43822) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 461

 Score = 76.3 bits (186), Expect = 9e-14
 Identities = 35/69 (50%), Positives = 50/69 (72%)
 Frame = -2

Query: 710 HGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLKSAIFRDRGAVSSNP 531
           HG G+SVA  I + + TA  +N ++A+  FS+ALY+SV +QYNVLKSAI   +G  +S P
Sbjct: 393 HGAGISVAPAISFSETTATCENPEKAKEVFSKALYNSVTEQYNVLKSAIQGKKGFEASTP 452

Query: 530 AISLSQPWR 504
            ++LSQPW+
Sbjct: 453 VVTLSQPWK 461



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>PLSB_SPIOL (Q43869) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 472

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 36/68 (52%), Positives = 49/68 (72%)
 Frame = -2

Query: 710 HGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLKSAIFRDRGAVSSNP 531
           HGVG+SV  EI Y DV+   +N +EA+  + +ALY+SV +QYNVLK+AI   +G+ +S P
Sbjct: 403 HGVGVSVEPEINYNDVSLGCKNDEEAKSVYGQALYNSVNEQYNVLKAAIHGKQGSGASTP 462

Query: 530 AISLSQPW 507
             SLSQPW
Sbjct: 463 TTSLSQPW 470



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>PLSB_PEA (P30706) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 457

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 33/69 (47%), Positives = 49/69 (71%)
 Frame = -2

Query: 710 HGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLKSAIFRDRGAVSSNP 531
           HG G+S A EI + + TA  +N ++A+  +++ALY SV +QY+VLKSAI   +G  +S P
Sbjct: 389 HGTGISTAPEISFSNTTAACENPEKAKDAYTKALYDSVTEQYDVLKSAIHGKKGLQASTP 448

Query: 530 AISLSQPWR 504
            +SLSQPW+
Sbjct: 449 VVSLSQPWK 457



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>PLSB_ARATH (Q43307) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 459

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 35/68 (51%), Positives = 47/68 (69%)
 Frame = -2

Query: 710 HGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLKSAIFRDRGAVSSNP 531
           HG GLS+A EI + DVTA  ++ +EA+  +S+ALY SV +QY +L SAI   RG  +S  
Sbjct: 391 HGTGLSIAPEINFSDVTADCESPNEAKEAYSQALYKSVNEQYEILNSAIKHRRGVEASTS 450

Query: 530 AISLSQPW 507
            +SLSQPW
Sbjct: 451 RVSLSQPW 458



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>PLSB_CARTI (Q42713) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 463

 Score = 70.1 bits (170), Expect = 6e-12
 Identities = 33/67 (49%), Positives = 47/67 (70%)
 Frame = -2

Query: 710 HGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLKSAIFRDRGAVSSNP 531
           HG G+SVA EI + +VTA   + +EA+  +S+ALY SV +QY VL SA+   +G  +S P
Sbjct: 392 HGTGISVAPEINFQEVTASCGSPEEAKAAYSQALYDSVCEQYKVLHSAVHGGKGLEASTP 451

Query: 530 AISLSQP 510
           ++SLSQP
Sbjct: 452 SVSLSQP 458



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>PLSB_CUCMO (P10349) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 396

 Score = 66.6 bits (161), Expect = 7e-11
 Identities = 33/68 (48%), Positives = 46/68 (67%)
 Frame = -2

Query: 710 HGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLKSAIFRDRGAVSSNP 531
           +G GLSVA EI + ++ A  +N +E R  +S+AL+ SV  QYNVLK+AI   +G  +S  
Sbjct: 329 NGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGASTA 388

Query: 530 AISLSQPW 507
            +SLSQPW
Sbjct: 389 DVSLSQPW 396



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>PLSB_CUCSA (Q39639) Glycerol-3-phosphate acyltransferase, chloroplast|
           precursor (EC 2.3.1.15) (GPAT)
          Length = 470

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 33/68 (48%), Positives = 43/68 (63%)
 Frame = -2

Query: 710 HGVGLSVAEEIKYGDVTAQSQNADEARGNFSEALYSSVVDQYNVLKSAIFRDRGAVSSNP 531
           +G GLSV  EI + ++ A   N DE R  +S+ALY SV  QYNVLK+AI   +   +S  
Sbjct: 402 NGTGLSVGPEISFDEIAASRDNPDEVREAYSKALYDSVAKQYNVLKAAIDGKQELEASVA 461

Query: 530 AISLSQPW 507
            +SLSQPW
Sbjct: 462 DVSLSQPW 469



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>DPO1_MYCLE (P46835) DNA polymerase I (EC 2.7.7.7) (POL I)|
          Length = 911

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
 Frame = -2

Query: 707 GVGLSVAEE--IKYGDVTAQSQNADEARGNFSEALYSSVVDQY-NVLKSAIFRDRGAVSS 537
           GVG   A +  + YG +     N +  RG   EAL + +     N   + + +D   V +
Sbjct: 210 GVGEKTAAKWIVDYGSLQGLVDNVESVRGKVGEALRTHLASVVRNRELTELVKDVPLVQT 269

Query: 536 NPAISLSQPW---R*N*AFSGLDFSFLFDRADELL 441
           +  + L QPW   R +  F  L+F  L DR  E L
Sbjct: 270 SDTLRL-QPWDRDRIHRLFDNLEFRVLRDRLFEAL 303


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,594,748
Number of Sequences: 219361
Number of extensions: 1985628
Number of successful extensions: 4577
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4574
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7196276819
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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