| Clone Name | rbaal23k06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | DECR_RAT (Q64591) 2,4-dienoyl-CoA reductase, mitochondrial precu... | 32 | 2.4 | 2 | ADO3_ARATH (Q9C9W9) Adagio protein 3 (Flavin-binding kelch repea... | 31 | 3.1 | 3 | DECR_MOUSE (Q9CQ62) 2,4-dienoyl-CoA reductase, mitochondrial pre... | 30 | 7.0 | 4 | CT032_HUMAN (Q9NQ75) HEF-like protein | 30 | 9.1 |
|---|
>DECR_RAT (Q64591) 2,4-dienoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.34) (2,4-dienoyl-CoA reductase [NADPH]) (4-enoyl-CoA reductase [NADPH]) Length = 335 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = -3 Query: 478 FPDKMVPCA--SGFQSRIAF---GMIGLGDSICLFGGVIGPGPRNQCIKPLSDVDILNVT 314 FP + P + FQ ++AF G GLG ++ F +G QC+ ++D+L T Sbjct: 44 FPPILKPMLPPNAFQGKVAFITGGGTGLGKAMTTFLSSLGA----QCVIASRNIDVLKAT 99 Query: 313 SERPTWRQGSPMTRCRGSV 257 +E T + G+ + R V Sbjct: 100 AEEITSKTGNKVYAIRCDV 118
>ADO3_ARATH (Q9C9W9) Adagio protein 3 (Flavin-binding kelch repeat F-box| protein 1) (F-box only protein 2a) (FBX2a) Length = 619 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -3 Query: 439 SRIAFGMIGLGDSICLFGGVIGPGPRNQCIKPLSDVDILNVTSERPTWRQ 290 SR F +G+ + LFGG ++PL D +LN+ +E P W++ Sbjct: 304 SRCNFSACAVGNRLVLFGG------EGVNMQPLDDTFVLNLDAECPEWQR 347
>DECR_MOUSE (Q9CQ62) 2,4-dienoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.34) (2,4-dienoyl-CoA reductase [NADPH]) (4-enoyl-CoA reductase [NADPH]) Length = 335 Score = 30.0 bits (66), Expect = 7.0 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = -3 Query: 445 FQSRIAF---GMIGLGDSICLFGGVIGPGPRNQCIKPLSDVDILNVTSERPTWRQGSPMT 275 FQ ++AF G GLG ++ F +G QC+ ++D+L T+E + + G+ + Sbjct: 57 FQGKVAFITGGGTGLGKAMTTFLSTLGA----QCVIASRNIDVLKATAEEISSKTGNKVH 112 Query: 274 RCRGSV 257 R V Sbjct: 113 AIRCDV 118
>CT032_HUMAN (Q9NQ75) HEF-like protein| Length = 786 Score = 29.6 bits (65), Expect = 9.1 Identities = 28/93 (30%), Positives = 38/93 (40%) Frame = +3 Query: 258 TLPRQRVIGDPCRQVGLSLVTFKISTSDNGLMH*FLGPGPITPPNKHMLSPKPIMPKAIL 437 + P+Q ++ P R V SL T D H GP + P K L P PK Sbjct: 149 SFPKQAILTLP-RPVRASLPTLPSQVYDVPTQH--RGPVVLKEPEKQQLYDIPASPKKAG 205 Query: 438 LWNPDAQGTILSGKFSPCCFLMQLLLSTYNSPP 536 L PD+Q SG+ P + L Y++ P Sbjct: 206 LHPPDSQA---SGQGVPLISVTTLRRGGYSTLP 235 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 105,464,067 Number of Sequences: 219361 Number of extensions: 2349446 Number of successful extensions: 5698 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 5462 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5696 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)