ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal23i01 |
|---|---|
| Clone Library Name | barley_pub |
>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 76.3 bits (186), Expect = 2e-14 Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 1/70 (1%) Frame = -2 Query: 366 KPFFGEDNVGYIDVVLGGMVAWMQGTXALCGLELLDATKTPLLLAWMERFGGMEPAKAVL 187 KPFFG D VG++DVVLGG + W L G L+D +TP L AW ERF + AK V+ Sbjct: 154 KPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVV 213 Query: 186 P-DIDRLVEF 160 P D D+L+EF Sbjct: 214 PDDADKLLEF 223
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 55.8 bits (133), Expect = 2e-08 Identities = 27/72 (37%), Positives = 42/72 (58%) Frame = -2 Query: 354 GEDNVGYIDVVLGGMVAWMQGTXALCGLELLDATKTPLLLAWMERFGGMEPAKAVLPDID 175 G+ G +D+ LG + ++ L GL L+DA+ TPLL W +RF AK VLPD + Sbjct: 157 GDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTE 216 Query: 174 RLVEFAKMKRAQ 139 ++V+F + + Q Sbjct: 217 KVVQFTRFLQVQ 228
>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT107) Length = 221 Score = 42.4 bits (98), Expect = 3e-04 Identities = 22/79 (27%), Positives = 37/79 (46%) Frame = -2 Query: 366 KPFFGEDNVGYIDVVLGGMVAWMQGTXALCGLELLDATKTPLLLAWMERFGGMEPAKAVL 187 KP+FG ++ G++D+ L G +W + P +AW +R E L Sbjct: 144 KPYFGGESFGFVDIALIGYYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSL 201 Query: 186 PDIDRLVEFAKMKRAQKAL 130 PD +++EF K+ R + L Sbjct: 202 PDQPKVLEFVKVLRQKFGL 220
>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)| (Auxin-regulated protein parC) Length = 221 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/79 (26%), Positives = 37/79 (46%) Frame = -2 Query: 366 KPFFGEDNVGYIDVVLGGMVAWMQGTXALCGLELLDATKTPLLLAWMERFGGMEPAKAVL 187 +P+FG ++ G++D+ L G +W + P +AW +R E L Sbjct: 144 RPYFGGESFGFVDIALIGFYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSL 201 Query: 186 PDIDRLVEFAKMKRAQKAL 130 PD +++EF K+ R + L Sbjct: 202 PDQPKVLEFVKVLRQKFGL 220
>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat| shock protein 26A) (G2-4) Length = 225 Score = 40.4 bits (93), Expect = 0.001 Identities = 21/73 (28%), Positives = 33/73 (45%) Frame = -2 Query: 366 KPFFGEDNVGYIDVVLGGMVAWMQGTXALCGLELLDATKTPLLLAWMERFGGMEPAKAVL 187 K FFG + G +D+ + W+ + GL+L + K P+L W + F VL Sbjct: 145 KKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVL 204 Query: 186 PDIDRLVEFAKMK 148 P D L + K + Sbjct: 205 PPRDPLFAYFKAR 217
>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)| (Aldoketomutase) (Glyoxalase I) Length = 219 Score = 37.0 bits (84), Expect = 0.012 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = -2 Query: 366 KPFFGEDNVGYIDVVLGGMVAWMQGTXALCGLELLDATKTPLLLAWMERFGGMEPAKAVL 187 KPF+G+D G++D+ L +W ++ + + P L+AW++R E L Sbjct: 142 KPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEE--ECPKLMAWVKRCMERETVSNTL 199 Query: 186 PDIDRL 169 PD ++ Sbjct: 200 PDAKKV 205
>GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18)| Length = 224 Score = 33.1 bits (74), Expect = 0.17 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = -2 Query: 366 KPFFGEDNVGYIDVVLGGMVAW-MQGTXALCGLELLDATKTPLLLAWMERFGGMEPAKAV 190 K +FG VG++D V G ++ + ++ GLE++ K P W+ +E K Sbjct: 144 KDYFGGKTVGFLDFVAGSLIPFCLERGWEGIGLEVITEEKFPEFKRWVRNLEKVEIVKDC 203 Query: 189 LPDIDRLVE 163 +P + VE Sbjct: 204 VPPREEHVE 212
>DAG1_BOVIN (O18738) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 32.7 bits (73), Expect = 0.22 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +3 Query: 90 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 260 LLL + + SH+ EPSE V W+ Q + L++L VP P AV G +R Sbjct: 20 LLLSVAVTQSHWPSEPSEAVRDWENQLEASMHSALSDLHETVPTVVGIPDGTAVVGRSFR 79 Query: 261 QGAP 272 P Sbjct: 80 VTIP 83
>GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC 2.5.1.18)| (Auxin-regulated protein parA) (STR246C protein) Length = 220 Score = 32.3 bits (72), Expect = 0.29 Identities = 17/69 (24%), Positives = 28/69 (40%) Frame = -2 Query: 366 KPFFGEDNVGYIDVVLGGMVAWMQGTXALCGLELLDATKTPLLLAWMERFGGMEPAKAVL 187 K +FG DN+G++DV L +W + + P L+ W + E L Sbjct: 143 KTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSL 200 Query: 186 PDIDRLVEF 160 P ++ F Sbjct: 201 PHPHKIYGF 209
>DAG1_HUMAN (Q14118) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 32.0 bits (71), Expect = 0.38 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +3 Query: 90 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 260 LLL + + SH+ EPSE V W+ Q + L++L VP P AV G +R Sbjct: 20 LLLSVVMAQSHWPSEPSEAVRDWENQLEASMHSVLSDLHEAVPTVVGIPDGTAVVGRSFR 79 Query: 261 QGAP 272 P Sbjct: 80 VTIP 83
>DAG1_MOUSE (Q62165) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 893 Score = 31.2 bits (69), Expect = 0.64 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%) Frame = +3 Query: 90 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 260 LLL + + +H+ EPSE V W+ Q + L++ VP P AV G +R Sbjct: 18 LLLSVAVAQAHWPSEPSEAVRDWKNQLEASMHSVLSDFQEAVPTVVGIPDGTAVVGRSFR 77 Query: 261 QGAP 272 P Sbjct: 78 VSIP 81
>DAG1_RABIT (Q28685) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%) Frame = +3 Query: 90 LLLEIPILLSHFRLEPSEHVSSWQTQ---PTYQYLAELP*QVPFHQSAPSMPAVTGFWWR 260 LLL + + SH+ EPSE V W+ Q + L++L +P P AV G +R Sbjct: 20 LLLCVAVAQSHWPSEPSEAVRDWENQLEASMHSVLSDLHEALPTVVGIPDGTAVVGRSFR 79 Query: 261 QGAP 272 P Sbjct: 80 VTIP 83
>YL_DROME (P98163) Putative vitellogenin receptor precursor (Protein yolkless)| (YL) Length = 1984 Score = 29.3 bits (64), Expect = 2.4 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%) Frame = +2 Query: 194 ALAGS-IPPKRSIHA-SSNGVLVASRSSRPQSAXVPCIHA 307 AL GS I K SI+ ++ ++VA RS +PQ A PC HA Sbjct: 1702 ALYGSRICHKISINVLNAQDIVVAGRSRQPQKASHPCAHA 1741
>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome| biogenesis disorder protein 1) Length = 1283 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = -2 Query: 363 PFFGEDNVGYIDVVLGGMVAWMQGTXALCGLELLDATKTPLLL 235 P G DN G D V+ ++ + G L G+ +L AT P L+ Sbjct: 947 PRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLI 989
>GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (EC 2.5.1.18)| (Auxin-regulated protein MSR-1) Length = 219 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -2 Query: 366 KPFFGEDNVGYIDVVLGGMVAW 301 K +FG DN+G++DV L +W Sbjct: 143 KTYFGGDNLGFVDVALVPFTSW 164
>GYRA_MYCGO (Q49467) DNA gyrase subunit A (EC 5.99.1.3) [Contains: Mgo gyrA| intein] (Fragment) Length = 550 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +1 Query: 247 GFGGVKELQATERLGSLHPC 306 GFGG K+ + T LGSL PC Sbjct: 362 GFGGAKQSKLTRILGSLPPC 381
>RIOK2_MOUSE (Q9CQS5) Serine/threonine-protein kinase RIO2 (EC 2.7.11.1) (RIO| kinase 2) Length = 547 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = +3 Query: 132 EPSEHVSSWQTQPTYQYLAELP*QVPFHQSAPSMPAVTGFWWRQGAPGHRAP 287 E S HVSS++ Q + E+ QV H+S + G PG R+P Sbjct: 383 EESAHVSSFEVTALSQAVEEMERQVLPHRSVTEFSEESRRTENDGQPGQRSP 434
>FTSK_ECOLI (P46889) DNA translocase ftsK| Length = 1329 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = +3 Query: 165 QPTYQYLAELP*QVPFHQSAPSMPAVTGFWWRQGAPGHRAP 287 QP Y AE P Q P++ AP P W + AP Sbjct: 405 QPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAP 445
>FTSK_ECOL6 (Q8FJC7) DNA translocase ftsK| Length = 1347 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = +3 Query: 165 QPTYQYLAELP*QVPFHQSAPSMPAVTGFWWRQGAPGHRAP 287 QP Y AE P Q P++ AP P W + AP Sbjct: 418 QPYYAPAAEQPVQQPYYAPAPEQPVAGNAWQAEEQQSTFAP 458
>GYRA_MYCMA (O33149) DNA gyrase subunit A (EC 5.99.1.3) [Contains: Mma gyrA| intein] (Fragment) Length = 473 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +1 Query: 247 GFGGVKELQATERLGSLHPC 306 GFGG K+ + T+ LGS+ PC Sbjct: 345 GFGGAKQEKLTKILGSMPPC 364
>ULK2_HUMAN (Q8IYT8) Serine/threonine-protein kinase ULK2 (EC 2.7.11.1)| (Unc-51-like kinase 2) Length = 1036 Score = 28.1 bits (61), Expect = 5.5 Identities = 21/60 (35%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = +2 Query: 173 LSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSAXVP-CIHATIPPNTTSM*PTLS 349 + I+ A G + P ASS VL S P SA P C H + TTS+ P+ S Sbjct: 698 MDIAPAGACGGVLAPPAGTAASSKAVLFTV-GSPPHSAAAPTCTHMFLRTRTTSVGPSNS 756
>FTSK_SHIFL (Q83S00) DNA translocase ftsK| Length = 1342 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = +3 Query: 165 QPTYQYLAELP*QVPFHQSAPSMPAVTGFWWRQGAPGHRAP 287 QP Y AE P Q P++ AP P W + AP Sbjct: 405 QPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAP 445
>FTSK_ECO57 (Q8X5H9) DNA translocase ftsK| Length = 1342 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/41 (34%), Positives = 17/41 (41%) Frame = +3 Query: 165 QPTYQYLAELP*QVPFHQSAPSMPAVTGFWWRQGAPGHRAP 287 QP Y AE P Q P++ AP P W + AP Sbjct: 405 QPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAP 445
>V70K_OYMV (P20130) 66 kDa protein| Length = 597 Score = 28.1 bits (61), Expect = 5.5 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 14/68 (20%) Frame = +3 Query: 75 KIRSTLLLEIPILLSHFR-LEPSEHVSSWQ-TQPTYQYLAELP--------*QVPFHQSA 224 ++RS L + PIL+ HF+ L S ++ S++ +PT + L LP VP HQ + Sbjct: 314 RVRSNSLQQTPILMGHFKSLGQSPNLRSFERPRPTRRSLRLLPLSPQKVPTVHVPTHQQS 373 Query: 225 ----PSMP 236 PS+P Sbjct: 374 GHKGPSLP 381
>RGF3_SCHPO (Q9Y7U5) Rho1 guanine nucleotide exchange factor 3| Length = 1275 Score = 27.7 bits (60), Expect = 7.1 Identities = 22/70 (31%), Positives = 31/70 (44%) Frame = +2 Query: 149 FILANSTNLSISGRTALAGSIPPKRSIHASSNGVLVASRSSRPQSAXVPCIHATIPPNTT 328 + L N +LS S L S P + S L +S + RPQS P + PPN Sbjct: 196 YSLYNDISLSCSPEPYLPLS-PTRSPARTPSPIRLYSSDALRPQSPLSPSVEYLTPPNPY 254 Query: 329 SM*PTLSSPK 358 S+ +SS + Sbjct: 255 SLKSDISSTR 264
>GSTX1_SOLTU (P32111) Probable glutathione S-transferase (EC 2.5.1.18)| (Pathogenesis-related protein 1) Length = 217 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/50 (26%), Positives = 22/50 (44%) Frame = -2 Query: 366 KPFFGEDNVGYIDVVLGGMVAWMQGTXALCGLELLDATKTPLLLAWMERF 217 K F D G+ D+V G ++ + G+ L + K P AW + + Sbjct: 139 KKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEY 188 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,647,745 Number of Sequences: 219361 Number of extensions: 1281176 Number of successful extensions: 3425 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 3305 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3421 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
