>gb|L11740.1|BLYEFIA Barley elongation factor 1 alpha, (EF-1A) mRNA sequence
          Length = 1725

 Score =  287 bits (145), Expect = 5e-75
 Identities = 145/145 (100%)
 Strand = Plus / Minus

                                                                        
Query: 12   tgactatatatggtagcaacattaactgatgaagttccaccaacacaaccgaacgataca 71
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1636 tgactatatatggtagcaacattaactgatgaagttccaccaacacaaccgaacgataca 1577

                                                                        
Query: 72   atgaccagagctttaagcagttcaaacacttctcgacacaaataacccaagcgactaaaa 131
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1576 atgaccagagctttaagcagttcaaacacttctcgacacaaataacccaagcgactaaaa 1517

                                     
Query: 132  caactatcgccaccaccaaacaccg 156
            |||||||||||||||||||||||||
Sbjct: 1516 caactatcgccaccaccaaacaccg 1492

>emb|Z23130.1|HVBLT63A H.vulgare BLT63 mRNA, complete CDS
          Length = 1560

 Score =  258 bits (130), Expect = 4e-66
 Identities = 130/130 (100%)
 Strand = Plus / Minus

                                                                        
Query: 27   gcaacattaactgatgaagttccaccaacacaaccgaacgatacaatgaccagagcttta 86
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1560 gcaacattaactgatgaagttccaccaacacaaccgaacgatacaatgaccagagcttta 1501

                                                                        
Query: 87   agcagttcaaacacttctcgacacaaataacccaagcgactaaaacaactatcgccacca 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1500 agcagttcaaacacttctcgacacaaataacccaagcgactaaaacaactatcgccacca 1441

                      
Query: 147  ccaaacaccg 156
            ||||||||||
Sbjct: 1440 ccaaacaccg 1431

>gb|AC118555.2| Homo sapiens chromosome 1 clone RP11-83A16, complete sequence
          Length = 47196

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    aaacacttctcgacacaaata 115
             |||||||||||||||||||||
Sbjct: 21231 aaacacttctcgacacaaata 21211

>gb|AC148867.3| Monodelphis domestica clone VMRC6-379O2, complete sequence
          Length = 162030

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 71   aatgaccagagctttaagcag 91
            |||||||||||||||||||||
Sbjct: 3050 aatgaccagagctttaagcag 3030

>dbj|AK058026.1| Homo sapiens cDNA FLJ25297 fis, clone STM07657
          Length = 1890

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 95  aaacacttctcgacacaaata 115
           |||||||||||||||||||||
Sbjct: 73  aaacacttctcgacacaaata 53

>gb|AC144690.3| Didelphis virginiana clone LB3-234D12, complete sequence
          Length = 164830

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 71     aatgaccagagctttaagcag 91
              |||||||||||||||||||||
Sbjct: 103624 aatgaccagagctttaagcag 103604

>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 71     aatgaccagagctttaagcag 91
              |||||||||||||||||||||
Sbjct: 516073 aatgaccagagctttaagcag 516053

>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 42.1 bits (21), Expect = 0.48
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 71     aatgaccagagctttaagcag 91
              |||||||||||||||||||||
Sbjct: 459011 aatgaccagagctttaagcag 458991

>emb|AL808135.13| Mouse DNA sequence from clone RP23-186D8 on chromosome X, complete
              sequence
          Length = 155880

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tatggtagcaacattaactg 39
              ||||||||||||||||||||
Sbjct: 125188 tatggtagcaacattaactg 125169

>gb|AC149611.6| Mus musculus BAC clone RP23-157P4 from 7, complete sequence
          Length = 217353

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     acaatgaccagagctttaag 88
              ||||||||||||||||||||
Sbjct: 139532 acaatgaccagagctttaag 139513

>gb|AC153638.4| Mus musculus 6 BAC RP23-416H6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 171957

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    caatgaccagagctttaag 88
             |||||||||||||||||||
Sbjct: 24290 caatgaccagagctttaag 24272

>gb|AC087042.2| Rattus norvegicus strain Brown Norway clone RP31-314L24, complete
             sequence
          Length = 110542

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    caatgaccagagctttaag 88
             |||||||||||||||||||
Sbjct: 81606 caatgaccagagctttaag 81588

>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 231332

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 70     caatgaccagagctttaag 88
              |||||||||||||||||||
Sbjct: 106232 caatgaccagagctttaag 106250

>emb|CR931737.1| Medicago truncatula chromosome 5 clone mth2-65j24, COMPLETE SEQUENCE
          Length = 126498

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 38    tgatgaagttccaccaaca 56
             |||||||||||||||||||
Sbjct: 84347 tgatgaagttccaccaaca 84329

>gb|AC090465.15| Homo sapiens chromosome 18, clone RP11-527C6, complete sequence
          Length = 174535

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 87     agcagttcaaacacttctc 105
              |||||||||||||||||||
Sbjct: 112092 agcagttcaaacacttctc 112074

>gb|AC024950.3|AC024950 Mus musculus strain C57BL6/J chromosome 6 clone RP23-208N9, complete
              sequence
          Length = 182382

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     caatgaccagagctttaag 88
              |||||||||||||||||||
Sbjct: 139518 caatgaccagagctttaag 139500

>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 70     caatgaccagagctttaag 88
              |||||||||||||||||||
Sbjct: 542180 caatgaccagagctttaag 542162

>dbj|AP004311.1| Synechocystis sp. PCC 6803 plasmid pSYSA DNA, complete genome
          Length = 103307

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    tgaccagagctttaagcag 91
             |||||||||||||||||||
Sbjct: 20455 tgaccagagctttaagcag 20437

>ref|XM_558212.1| Anopheles gambiae str. PEST ENSANGP00000028550 (ENSANGG00000025003),
            partial mRNA
          Length = 1728

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   agttccaccaacacaaccg 62
            |||||||||||||||||||
Sbjct: 1021 agttccaccaacacaaccg 1039

>ref|XM_551113.1| Anopheles gambiae str. PEST ENSANGP00000027513 (ENSANGG00000022181),
            partial mRNA
          Length = 1137

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   agttccaccaacacaaccg 62
            |||||||||||||||||||
Sbjct: 1021 agttccaccaacacaaccg 1039

>ref|XM_321312.2| Anopheles gambiae str. PEST ENSANGP00000012791 (ENSANGG00000010302),
            partial mRNA
          Length = 3189

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   agttccaccaacacaaccg 62
            |||||||||||||||||||
Sbjct: 1108 agttccaccaacacaaccg 1126

>ref|XM_315820.2| Anopheles gambiae str. PEST ENSANGP00000010341 (ENSANGG00000001891),
            partial mRNA
          Length = 2031

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   agttccaccaacacaaccg 62
            |||||||||||||||||||
Sbjct: 1024 agttccaccaacacaaccg 1042

>ref|XM_556472.1| Anopheles gambiae str. PEST ENSANGP00000002241 (ENSANGG00000001891),
            partial mRNA
          Length = 4842

 Score = 38.2 bits (19), Expect = 7.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 44   agttccaccaacacaaccg 62
            |||||||||||||||||||
Sbjct: 1111 agttccaccaacacaaccg 1129


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,118,829
Number of Sequences: 3902068
Number of extensions: 1118829
Number of successful extensions: 77065
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77009
Number of HSP's gapped (non-prelim): 56
length of query: 156
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 134
effective length of database: 17,147,199,772
effective search space: 2297724769448
effective search space used: 2297724769448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)