>PO24_POPJA (Q03275) Retrovirus-related Pol polyprotein from type-1|
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] (Fragment)
          Length = 482

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -3

Query: 131 LRISYASSLHPD--SKYGSALLICKFXLVWD*PNFIPSVHHMSCA 3
           LR++  S   PD     G  +++C   +VW+ PN +   +H   A
Sbjct: 353 LRLADGSLRKPDLVMAQGDTIVVCDVTIVWEGPNPLTMAYHQKVA 397

>CATA2_MAIZE (P12365) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 491

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 64  LQMSNAEPYLESGWRLDAYEILSIRRQWPDHTSPLQ 171
           L +   +P +E   RLD  + L + + WP+ T PLQ
Sbjct: 267 LYIQTMDPEMED--RLDDLDPLDVTKTWPEDTFPLQ 300


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,683,628
Number of Sequences: 219361
Number of extensions: 384541
Number of successful extensions: 691
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 80,573,946
effective HSP length: 36
effective length of database: 72,676,950
effective search space used: 1744246800
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)