>WRN_CAEEL (Q19546) Probable Werner syndrome ATP-dependent helicase homolog 1|
            (EC 3.6.1.-)
          Length = 1056

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
 Frame = +2

Query: 32   CIITRTYHTGYRLTNPSTIDITPPELITSMQ---------VYTRMESTRTHIREEKMRTN 184
            C++  +  TG   TN +  D+ PPELI+ MQ         VYT    +R+  +E      
Sbjct: 875  CVVQFSKETGIA-TNVNANDMIPPELISKMQKVLSDAVRRVYTEHLISRSTAKEVATARG 933

Query: 185  RSSRTRWSFIEACSSCSGEEGTPL 256
             S  T +S++    + + E+G PL
Sbjct: 934  ISEGTVYSYL----AMAVEKGLPL 953

>STOX1_HUMAN (Q6ZVD7) Storkhead-box protein 1 (Winged helix domain-containing|
           protein)
          Length = 989

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
 Frame = +2

Query: 44  RTYHTG--YRLTNPSTIDITPPELITSMQVYTRMESTRTHIREEKMRTNRSSRTRWSFIE 217
           + YHTG  Y +  P T  IT           T  +  +  +  ++ R   +S T    +E
Sbjct: 176 KIYHTGEGYFIVTPQTYFITN----------TTTQENKRMLPSDESRLMPASMTYLVSME 225

Query: 218 ACSSCSGEEGTPLGHC 265
           +C+  + E   P+ HC
Sbjct: 226 SCAESAQENAAPISHC 241

>FANCJ_CHICK (Q3YK19) Fanconi anemia group J protein homolog (EC 3.6.1.-)|
           (ATP-dependent RNA helicase BRIP1) (Protein FACJ)
          Length = 1252

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 104 ELITSMQVYTRMESTRTHIREEKMRTNRSSRTRWSFIEACSSCSGEE 244
           +L+ +++VY + ++    +  EK   N S +T +S    CS  SG+E
Sbjct: 187 QLVDALEVYNQRKNGELIVHSEKSVKNTSPQTLFSSCTECSCSSGKE 233

>HISX_ACIAD (Q6FEC8) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)|
          Length = 430

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
 Frame = +2

Query: 80  STIDITPPELITSMQVYTRMESTRTHIREEKMRTNRSSRTR--WSFIEACSSCSGEEGTP 253
           S +++T  +L T+ +  T        +  E++R+   ++ +  WS+++A  +  G++ TP
Sbjct: 65  SDLELTQEQLKTAFEALTAEIREALELAAERIRSFHQAQKQEGWSYVDALGNTLGQKVTP 124

Query: 254 L 256
           L
Sbjct: 125 L 125

>KGP24_DROME (Q03043) cGMP-dependent protein kinase, isozyme 2 forms|
           cD4/T1/T3A/T3B (EC 2.7.11.12) (CGK) (Foraging protein)
          Length = 1088

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = +1

Query: 73  QPEHN*HYSTGTHNQYASIHKNGIHKNTHPRGKN---ENKSFLQNKMV 207
           Q E N +Y   T     SI  N  + NTHP G N    N S + N +V
Sbjct: 171 QQEPNANYQFPTDLGLVSIVNNNNNTNTHPSGSNSGSNNNSNINNNLV 218


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,590,129
Number of Sequences: 219361
Number of extensions: 963842
Number of successful extensions: 2752
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2748
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)