ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal23c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CEND3_MOUSE (Q8R5G7) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GA... 28 9.0
2CEND3_HUMAN (Q8WWN8) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GA... 28 9.0

>CEND3_MOUSE (Q8R5G7) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GAP, ankyrin|
           repeat and pleckstrin homology domain-containing protein
           3) (Dual specificity Rho- and Arf-GTPase-activating
           protein 1)
          Length = 1538

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -1

Query: 160 SSSRRXQHIXFSRYIVDWFLSHLSYKEELRCSTLSSCIHTQ-TLGHWAQPKP 8
           S   + Q I   R  V  F +    + +L CSTL SC+  Q  LGH   P P
Sbjct: 338 SKDNKFQVITGQRVFV--FRTESEAQRDLWCSTLQSCLKEQRLLGHPRPPHP 387



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>CEND3_HUMAN (Q8WWN8) Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GAP, ankyrin|
           repeat and pleckstrin homology domain-containing protein
           3)
          Length = 1544

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -1

Query: 160 SSSRRXQHIXFSRYIVDWFLSHLSYKEELRCSTLSSCIHTQ-TLGHWAQPKP 8
           S   + Q I   R  V  F +    + ++ CSTL SC+  Q  LGH   P+P
Sbjct: 343 SKDNKFQVITGQRVFV--FRTESEAQRDMWCSTLQSCLKEQRLLGHPRPPQP 392


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,301,261
Number of Sequences: 219361
Number of extensions: 311546
Number of successful extensions: 919
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 80,573,946
effective HSP length: 28
effective length of database: 74,431,838
effective search space used: 1786364112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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