ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal22m20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B... 90 4e-15
2gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 90 4e-15
3gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carbo... 88 2e-14
4emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodi... 88 2e-14
5gb|AY553258.1| Hordeum marinum isolate Hor_mar phosphoenolpyruva... 72 9e-10
6gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 68 1e-08
7gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 68 1e-08
8gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 68 1e-08
9emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroi... 66 6e-08
10emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene 66 6e-08
11gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 62 9e-07
12gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14... 60 3e-06
13gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5... 60 3e-06
14gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 60 3e-06
15gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN... 60 3e-06
16gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 60 3e-06
17gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 60 3e-06
18gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 60 3e-06
19gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 60 3e-06
20gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 60 3e-06
21gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 60 3e-06
22gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 60 3e-06
23emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAR... 58 1e-05
24gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence 58 1e-05
25gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 56 5e-05
26gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 p... 56 5e-05
27gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 p... 56 5e-05
28gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 p... 56 5e-05
29gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A g... 54 2e-04
30gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga... 54 2e-04
31gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (r... 54 2e-04
32gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein ... 54 2e-04
33gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td98... 54 2e-04
34gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td44... 54 2e-04
35gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rg... 54 2e-04
36gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (... 54 2e-04
37gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rg... 54 2e-04
38gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga... 54 2e-04
39gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga... 54 2e-04
40gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga... 54 2e-04
41gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (... 54 2e-04
42gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rg... 54 2e-04
43gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga... 54 2e-04
44gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 54 2e-04
45gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, com... 52 8e-04
46gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 52 8e-04
47gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 52 8e-04
48gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 52 8e-04
49gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 52 8e-04
50gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 52 8e-04
51gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 52 8e-04
52gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 52 8e-04
53gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 52 8e-04
54gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 compl... 50 0.003
55gb|AF347066.1| Triticum aestivum truncated sucrose-phosphate syn... 50 0.003
56emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase 50 0.003
57dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP typ... 50 0.003
58gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L... 50 0.003
59gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI... 48 0.013
60gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome... 44 0.20
61gb|BT009488.1| Triticum aestivum clone wr1.pk0058.g3:fis, full i... 44 0.20
62gb|AF458265.1| Triticum aestivum isolate Can3842 rga2 protein (r... 44 0.20
63gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, geno... 44 0.20
64gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosom... 42 0.80
65gb|AY133248.1| Aegilops tauschii starch synthase II gene, comple... 42 0.80
66gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome... 42 0.80
67gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruva... 42 0.80
68gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, com... 42 0.80
69gb|AC128681.6| Homo sapiens 12 BAC RP11-65M12 (Roswell Park Canc... 42 0.80
70emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene 42 0.80
71tpg|BK005008.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 0.80
72dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch syntha... 42 0.80
73dbj|AK148812.1| Mus musculus 2 days neonate sympathetic ganglion... 42 0.80
74gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-bindin... 42 0.80
75dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.80
76gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.80
77gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 40 3.2
78gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.2
79gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.2
80emb|CT030567.1| Xenopus tropicalis finished cDNA, clone TNeu051d06 40 3.2
81emb|AM075827.1| Triticum aestivum mRNA for beclin 1 protein (atg... 40 3.2
82gb|AC140120.2| Homo sapiens 3 BAC RP11-106F4 (Roswell Park Cance... 40 3.2
83emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4,... 40 3.2
84gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 3.2
85gb|AC109353.3| Homo sapiens BAC clone RP11-521B22 from 4, comple... 40 3.2
86gb|AC034245.5| Homo sapiens chromosome 5 clone RP11-155L15, comp... 40 3.2
87gb|AY036610.1| Triticum aestivum beclin1-like protein mRNA, comp... 40 3.2
88dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
89dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
90dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
91dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
92gb|AC105914.4| Homo sapiens BAC clone RP13-577H12 from 4, comple... 40 3.2
93gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromo... 40 3.2
94gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, comple... 40 3.2
95gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ... 40 3.2
96gb|AC158671.3| Mus musculus 6 BAC RP23-62E15 (Roswell Park Cance... 40 3.2
97dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
98dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
99dbj|AP005487.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
100dbj|AK105421.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.2 
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus
              region
          Length = 160897

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 57/61 (93%)
 Strand = Plus / Plus

                                                                          
Query: 1      gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
              ||||||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||
Sbjct: 150216 gagcatttagaacactactttagtaatttaaacactcttatattagtttacagagggagt 150275

               
Query: 61     a 61
              |
Sbjct: 150276 a 150276



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 37     cttatattagtttacagagggagta 61
              ||||||||||||||| |||||||||
Sbjct: 150216 cttatattagtttacggagggagta 150192
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>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 57/61 (93%)
 Strand = Plus / Minus

                                                                         
Query: 1     gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
             |||||||||||| |||| ||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 34570 gagcatttagaatactactttagtaatctaaacactcttatattagtttacagagggagt 34511

              
Query: 61    a 61
             |
Sbjct: 34510 a 34510



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 37    cttatattagtttacagagggagta 61
             ||||||||||||||| |||||||||
Sbjct: 34570 cttatattagtttacggagggagta 34594
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>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene,
            nuclear gene encoding plastid protein, partial cds
          Length = 9285

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
            |||| ||||||||||||||||||| |||||||||  |||||||| |||||||||||||||
Sbjct: 6406 gagcgtttagaacactattttagtgatctaaacactcttatattggtttacagagggagt 6465

                
Query: 61   acat 64
            ||||
Sbjct: 6466 acat 6469



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 37   cttatattagtttacagagggagta 61
            ||||||||||||||| |||||||||
Sbjct: 6406 cttatattagtttacggagggagta 6382
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>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons
            1-3
          Length = 2155

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                        
Query: 2    agcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
            |||||||||||||||| |||||||||||||||   |||||||||||||||||||||||||
Sbjct: 1279 agcatttagaacactactttagtaatctaaacgctcttatattagtttacagagggagta 1338



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 38   ttatattagtttacagagggagtacatatcaa 69
            |||||||||||||||| |||||||| ||||||
Sbjct: 1277 ttatattagtttacagggggagtacttatcaa 1246
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>gb|AY553258.1| Hordeum marinum isolate Hor_mar phosphoenolpyruvate carboxylase
           (pepC) gene, exons 1, 2 and partial cds
          Length = 839

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 57/63 (90%), Gaps = 2/63 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   gagcatttagaacactattttagtaatc--taaacatgcttatattagtttacagaggga 58
           ||||||||||||||||||||||||||||  ||||||   ||||||||||||||| |||||
Sbjct: 551 gagcatttagaacactattttagtaatctataaacacttttatattagtttacaaaggga 492

              
Query: 59  gta 61
           |||
Sbjct: 491 gta 489
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>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||||||| |||||||||||||||    ||||||||||||||||| ||||||
Sbjct: 941 catttagaacactactttagtaatctaaacgcttttatattagtttacagatggagta 884
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>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||||||| |||||||||||||||    ||||||||||||||||| ||||||
Sbjct: 941 catttagaacactactttagtaatctaaacgcttttatattagtttacagatggagta 884
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>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1259

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||||||| |||||||||||||||    ||||||||||||||||| ||||||
Sbjct: 941 catttagaacactactttagtaatctaaacgcttttatattagtttacagatggagta 884
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>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494
          Length = 2570

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
            |||| |||||| ||||||||||||| |||||||   ||||||||||||||| ||||||||
Sbjct: 1413 gagcgtttagatcactattttagtattctaaacgctcttatattagtttacggagggagt 1472

             
Query: 61   a 61
            |
Sbjct: 1473 a 1473



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 37   cttatattagtttacagagggagtac 62
            ||||||||||||||||||||||||||
Sbjct: 1413 cttatattagtttacagagggagtac 1388
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>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene
          Length = 10815

 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 54/61 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
            |||| |||||| ||||| |||||| ||||||||   ||||||||||||||||||||||||
Sbjct: 7559 gagcgtttagatcactactttagtgatctaaacgctcttatattagtttacagagggagt 7618

             
Query: 61   a 61
            |
Sbjct: 7619 a 7619
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>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 61.9 bits (31), Expect = 9e-07
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                         
Query: 4      catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagtac 62
              |||||||| |||||||||| | |||||| ||  |||||||||||||||||| |||||||
Sbjct: 201045 catttagatcactattttacttatctaagcactcttatattagtttacagatggagtac 200987



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 37    cttatattagtttacagagggagtaca 63
             |||||||||||||||||||||||||||
Sbjct: 29764 cttatattagtttacagagggagtaca 29738



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 6     tttagaacactattttagtaatctaaacatgcttatattagtttacagaggga 58
             |||||| ||||| |||||| |||||||    ||||||||||||||||||||||
Sbjct: 29769 tttagatcactactttagtgatctaaaaggtcttatattagtttacagaggga 29821



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 38     ttatattagtttacagagggagta 61
              |||||||||||||| |||||||||
Sbjct: 201049 ttatattagtttacggagggagta 201072
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>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 21   tagtaatctaaacatgcttatattagtttacagagggagtac 62
            |||| |||||||||  ||||||||||||||||||||||||||
Sbjct: 6357 tagtgatctaaacactcttatattagtttacagagggagtac 6316



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                     
Query: 6    tttagaacactattttagtaatctaaacatgcttatattagtttacagagggagtac 62
            |||||| ||||| |||||| ||||||||   ||||||||||||||| ||||||||||
Sbjct: 6346 tttagatcactactttagtgatctaaacgctcttatattagtttacggagggagtac 6402
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>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds
          Length = 12080

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 4     catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
             |||||||||||||| ||||||||| |||||    ||||||||||||||||| ||||||
Sbjct: 10766 catttagaacactactttagtaatttaaacgcttttatattagtttacagatggagta 10709
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>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete
             sequence
          Length = 101158

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 4     catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
             |||||||||||||| ||||||||| |||||    ||||||||||||||||| ||||||
Sbjct: 62487 catttagaacactactttagtaatttaaacgcttttatattagtttacagatggagta 62430
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>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds
          Length = 12360

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 4     catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
             |||||||||||||| ||||||||| |||||    ||||||||||||||||| ||||||
Sbjct: 11536 catttagaacactactttagtaatttaaacgcttttatattagtttacagatggagta 11479
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>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1214

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||||||| ||||||||| |||||    ||||||||||||||||| ||||||
Sbjct: 894 catttagaacactactttagtaatttaaacgcttttatattagtttacagatggagta 837
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>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    ||||||||||||||||| ||||||
Sbjct: 942 catttaaaacactactttagtaatctaaacgcttttatattagtttacagatggagta 885
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>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    ||||||||||||||||| ||||||
Sbjct: 941 catttaaaacactactttagtaatctaaacgcttttatattagtttacagatggagta 884
to top
>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    ||||||||||||||||| ||||||
Sbjct: 942 catttaaaacactactttagtaatctaaacgcttttatattagtttacagatggagta 885
to top
>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    ||||||||||||||||| ||||||
Sbjct: 942 catttaaaacactactttagtaatctaaacgcttttatattagtttacagatggagta 885
to top
>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||||||| ||||||||| |||||    ||||||||||||||||| ||||||
Sbjct: 941 catttagaacactactttagtaatttaaacgcttttatattagtttacagatggagta 884
to top
>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||||||| ||||||||| |||||    ||||||||||||||||| ||||||
Sbjct: 941 catttagaacactactttagtaatttaaacgcttttatattagtttacagatggagta 884
to top
>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6
          Length = 4034

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
            |||| ||||||  ||||||||||| |||||||    ||||||||||||||||||||||||
Sbjct: 2735 gagcgtttagattactattttagtgatctaaatgctcttatattagtttacagagggagt 2794

             
Query: 61   a 61
            |
Sbjct: 2795 a 2795



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                        
Query: 1    gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
            ||||||||||| |||||   |||||||||||||   ||||||||||||||| ||||||||
Sbjct: 2771 gagcatttagatcactaaaatagtaatctaaacgctcttatattagtttacggagggagt 2712

             
Query: 61   a 61
            |
Sbjct: 2711 a 2711
to top
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence
          Length = 1082

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                     
Query: 6    tttagaacactattttagtaatctaaacatgcttatattagtttacagagggagtac 62
            |||||| ||||| |||||| |||||||    ||||||||||||||||||||||||||
Sbjct: 971  tttagatcactactttagtgatctaaaagctcttatattagtttacagagggagtac 1027
to top
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 13  cactattttagtaatctaaacatgcttatattagtttacagagggagt 60
           |||||||||||| ||||||||   ||||||||||||||| ||||||||
Sbjct: 792 cactattttagtgatctaaacgctcttatattagtttactgagggagt 745



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 14   actattttagtaatctaaacatgcttatattagtttacagagggagta 61
            ||||||||||| ||||||||   ||||||||  |||||||||||||||
Sbjct: 8876 actattttagtgatctaaacgatcttatatttctttacagagggagta 8829
to top
>gb|AF099671.1|AF099671 Secale cereale thaumatin-like protein 2 precursor (TLP2) mRNA,
           complete cds
          Length = 975

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 6   tttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||||| |||||| |||||||     ||||||||||||||||||||||||
Sbjct: 695 tttagaacactactttagtgatctaaatgcttttatattagtttacagagggagta 640



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   agcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||| |||||   ||||  ||||||||  ||||||||||||||| |||||||||
Sbjct: 665 agcatttagatcactaaagtagtgttctaaacactcttatattagtttacggagggagta 724

              
Query: 62  cat 64
           |||
Sbjct: 725 cat 727
to top
>gb|AF099670.1|AF099670 Secale cereale thaumatin-like protein 3 precursor (TLP3) gene,
           complete cds
          Length = 1003

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 6   tttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||||| |||||| |||||||     ||||||||||||||||||||||||
Sbjct: 787 tttagaacactactttagtgatctaaatgcttttatattagtttacagagggagta 732



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   agcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||| |||||   ||||  ||||||||  ||||||||||||||| |||||||||
Sbjct: 757 agcatttagatcactaaagtagtgttctaaacactcttatattagtttacggagggagta 816

              
Query: 62  cat 64
           |||
Sbjct: 817 cat 819
to top
>gb|AF096927.1|AF096927 Secale cereale thaumatin-like protein 1 precursor (TLP1) mRNA,
           complete cds
          Length = 1151

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 6   tttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||||| |||||| |||||||     ||||||||||||||||||||||||
Sbjct: 685 tttagaacactactttagtgatctaaatgcttttatattagtttacagagggagta 630



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   agcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||||||| |||||   ||||  ||||||||  ||||||||||||||| |||||||||
Sbjct: 655 agcatttagatcactaaagtagtgttctaaacactcttatattagtttacggagggagta 714

              
Query: 62  cat 64
           |||
Sbjct: 715 cat 717
to top
>gb|AY270159.1| Triticum aestivum resistance protein T10rga2-1A gene, complete cds
          Length = 4768

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 37   cttatattagtttacagagggagtaca 63
            |||||||||||||||||||||||||||
Sbjct: 1165 cttatattagtttacagagggagtaca 1191



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 37   cttatattagtttacagaggga 58
            ||||||||||||||||||||||
Sbjct: 1130 cttatattagtttacagaggga 1109
to top
>gb|AF458280.1| Triticum urartu isolate Tu11498 rga2 protein (rga2) gene, partial
           cds
          Length = 1437

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AF458279.1| Triticum monococcum isolate Tm896 rga2 protein (rga2) gene, partial
           cds
          Length = 1438

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 252 cttatattagtttacagagggagtaca 278



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 6   tttagaacactattttagtaatctaaacatgcttatattagtttacagaggga 58
           |||||| ||||| |||||| |||||||    ||||||||||||||||||||||
Sbjct: 247 tttagatcactactttagtgatctaaaaggtcttatattagtttacagaggga 195
to top
>gb|AF458278.1| Triticum monococcum isolate Tm13010 rga2 protein (rga2) gene,
           partial cds
          Length = 1439

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 6   tttagaacactattttagtaatctaaacatgcttatattagtttacagaggga 58
           |||||| ||||| |||||| |||||||    ||||||||||||||||||||||
Sbjct: 247 tttagatcactactttagtgatctaaaaggtcttatattagtttacagaggga 195
to top
>gb|AF458277.1| Triticum turgidum subsp. dicoccoides isolate Td9803 rga2 protein
           (rga2) gene, partial cds
          Length = 1441

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 254 cttatattagtttacagagggagtaca 280



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AF458276.1| Triticum turgidum subsp. dicoccoides isolate Td4467 rga2 protein
           (rga2) gene, partial cds
          Length = 1436

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AF458275.1| Triticum turgidum subsp. durum isolate Langdon rga2 protein (rga2)
           gene, partial cds
          Length = 1438

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AF458273.1| Triticum aestivum isolate ThLr101A rga2 protein (rga2) gene,
           partial cds
          Length = 1438

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AF458272.1| Triticum aestivum isolate Weique rga2 protein (rga2) gene, partial
           cds
          Length = 1435

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AF458271.1| Triticum aestivum isolate Tesia rga2 protein (rga2) gene, partial
           cds
          Length = 1438

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AF458270.1| Triticum aestivum isolate Pavon rga2 protein (rga2) gene, partial
           cds
          Length = 1438

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AF458269.1| Triticum aestivum isolate Opata rga2 protein (rga2) gene, partial
           cds
          Length = 1437

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AF458268.1| Triticum aestivum isolate Nocazari rga2 protein (rga2) gene,
           partial cds
          Length = 1437

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 250 cttatattagtttacagagggagtaca 276



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 215 cttatattagtttacagaggga 194
to top
>gb|AF458267.1| Triticum aestivum isolate Galvez rga2 protein (rga2) gene, partial
           cds
          Length = 1436

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 250 cttatattagtttacagagggagtaca 276



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 215 cttatattagtttacagaggga 194
to top
>gb|AF458266.1| Triticum aestivum isolate Esmer rga2 protein (rga2) gene, partial
           cds
          Length = 1437

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 37  cttatattagtttacagagggagtaca 63
           |||||||||||||||||||||||||||
Sbjct: 251 cttatattagtttacagagggagtaca 277



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence
          Length = 187012

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 37    cttatattagtttacagagggagtaca 63
             |||||||||||||||||||||||||||
Sbjct: 47519 cttatattagtttacagagggagtaca 47493



 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 37    cttatattagtttacagaggga 58
             ||||||||||||||||||||||
Sbjct: 47554 cttatattagtttacagaggga 47575
to top
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and
             transposon MITE-like and retrotransposon Lolaog, complete
             sequence
          Length = 17220

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                       
Query: 4     catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
             |||||| ||||||| |||||||||||||||    |||||||| |||||||| ||||||
Sbjct: 16747 catttaaaacactactttagtaatctaaacgcttttatattaatttacagatggagta 16690
to top
>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    |||||||| |||||||| ||||||
Sbjct: 940 catttaaaacactactttagtaatctaaacgcttttatattaatttacagatggagta 883
to top
>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| |||| || |||||||||||||||    ||||||||||||||||| ||||||
Sbjct: 942 catttaaaacattactttagtaatctaaacgcttttatattagtttacagatggagta 885
to top
>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| |||| || |||||||||||||||    ||||||||||||||||| ||||||
Sbjct: 942 catttaaaacattactttagtaatctaaacgcttttatattagtttacagatggagta 885
to top
>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    |||||||| |||||||| ||||||
Sbjct: 941 catttaaaacactactttagtaatctaaacgcttttatattaatttacagatggagta 884
to top
>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    |||||||| |||||||| ||||||
Sbjct: 940 catttaaaacactactttagtaatctaaacgcttttatattaatttacagatggagta 883
to top
>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    |||||||| |||||||| ||||||
Sbjct: 940 catttaaaacactactttagtaatctaaacgcttttatattaatttacagatggagta 883
to top
>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    |||||||| |||||||| ||||||
Sbjct: 940 catttaaaacactactttagtaatctaaacgcttttatattaatttacagatggagta 883
to top
>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                     
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagta 61
           |||||| ||||||| |||||||||||||||    |||||||| |||||||| ||||||
Sbjct: 940 catttaaaacactactttagtaatctaaacgcttttatattaatttacagatggagta 883
to top
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                       
Query: 2      agcatttagaacactattttagtaatctaaacatgcttatattagtttacagaggga 58
              |||||||||| || || ||||||| |||||||   ||||||||||||||| ||||||
Sbjct: 103725 agcatttagatcattactttagtattctaaacgctcttatattagtttacggaggga 103669



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 38     ttatattagtttacagagggagtac 62
              ||||||||||||||| |||||||||
Sbjct: 103727 ttatattagtttacaaagggagtac 103751
to top
>gb|AF347066.1| Triticum aestivum truncated sucrose-phosphate synthase 4 mRNA,
            partial cds
          Length = 2642

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 37   cttatattagtttacagagggagta 61
            |||||||||||||||||||||||||
Sbjct: 1423 cttatattagtttacagagggagta 1447
to top
>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase
          Length = 5574

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                        
Query: 4    catttagaacactattttagtaatctaaacatgcttatattagtttacagagggagtaca 63
            ||||||||  |||| |||||| |||||||||| ||||||||  | ||| |||||||||||
Sbjct: 2286 catttagataactactttagtgatctaaacattcttatatttctgtacggagggagtaca 2345

             
Query: 64   t 64
            |
Sbjct: 2346 t 2346
to top
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription
           factor, complete cds
          Length = 941

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 21  tagtaatctaaacatgcttatattagtttacagagggagta 61
           |||| |||||||||  ||||||||||||||| |||||||||
Sbjct: 782 tagtgatctaaacactcttatattagtttacggagggagta 822



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 37  cttatattagtttacagagggagta 61
           ||||||||||||||| |||||||||
Sbjct: 762 cttatattagtttaccgagggagta 738
to top
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 1     gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
             |||| |||||| ||||| |||||| ||||||||   ||||||||  ||||||||||||||
Sbjct: 21713 gagcgtttagatcactactttagtgatctaaacgctcttatatttatttacagagggagt 21654

              
Query: 61    a 61
             |
Sbjct: 21653 a 21653
to top
>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box
           transcription factor (Vrn1) gene, partial cds
          Length = 1259

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 4   catttagaacactattttagtaatctaaacatgcttatattagtttacagag 55
           |||||| ||||||| |||||||||||||||    |||||||| |||||||||
Sbjct: 939 catttaaaacactactttagtaatctaaacgcttttatattaatttacagag 888
to top
>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete sequence
          Length = 208153

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 29     taaacatgcttatattagttta 50
              ||||||||||||||||||||||
Sbjct: 143313 taaacatgcttatattagttta 143334
to top
>gb|BT009488.1| Triticum aestivum clone wr1.pk0058.g3:fis, full insert mRNA
           sequence
          Length = 1768

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 37  cttatattagtttacagagggagtac 62
           ||||||||||| ||||||||||||||
Sbjct: 413 cttatattagtctacagagggagtac 438
to top
>gb|AF458265.1| Triticum aestivum isolate Can3842 rga2 protein (rga2) gene, partial
           cds
          Length = 1392

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 37  cttatattagtttacagaggga 58
           ||||||||||||||||||||||
Sbjct: 216 cttatattagtttacagaggga 195
to top
>gb|AY951944.1| Triticum monococcum TmBAC 21C6 FR-Am2 locus, genomic sequence
          Length = 190469

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 38    ttatattagtttacagagggagtaca 63
             ||||||||||||||||| ||||||||
Sbjct: 89570 ttatattagtttacagaaggagtaca 89545
to top
>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete
             sequence
          Length = 201050

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 97    aatgcacaaacttattctcag 117
             |||||||||||||||||||||
Sbjct: 72374 aatgcacaaacttattctcag 72394
to top
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds
          Length = 9024

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
            |||| ||||||  |||| |||||| ||||||||   |||||| ||||||||||| |||||
Sbjct: 2835 gagcgtttagattactactttagtgatctaaacgctcttatagtagtttacagacggagt 2894

             
Query: 61   a 61
            |
Sbjct: 2895 a 2895



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 21   tagtaatctaaacatgcttatattagtttacagagggagta 61
            |||||||||||||   ||||||||| ||||| |||||||||
Sbjct: 2851 tagtaatctaaacgctcttatattaatttacggagggagta 2811
to top
>gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome 12, complete sequence
          Length = 193068

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    aatgcacaaacttattctcag 117
             |||||||||||||||||||||
Sbjct: 35845 aatgcacaaacttattctcag 35825
to top
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase
           (pepC) gene, exons 1, 2 and partial cds
          Length = 1117

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 37  cttatattagtttacagagggagta 61
           ||||||||||||||| |||||||||
Sbjct: 590 cttatattagtttacggagggagta 614
to top
>gb|AC105161.10| Mus musculus chromosome 1, clone RP24-73O16, complete sequence
          Length = 255501

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     atattagtttacagagggagt 60
              |||||||||||||||||||||
Sbjct: 148409 atattagtttacagagggagt 148429
to top
>gb|AC128681.6| Homo sapiens 12 BAC RP11-65M12 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 60492

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 91   tgctcaaatgcacaaacttat 111
            |||||||||||||||||||||
Sbjct: 9523 tgctcaaatgcacaaacttat 9543
to top
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene
          Length = 1862

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 38   ttatattagtttacagagggagtac 62
            ||||||||||||||||| |||||||
Sbjct: 1724 ttatattagtttacagaaggagtac 1700
to top
>tpg|BK005008.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY
            transcription factor 5 (WRKY5) gene, complete cds
          Length = 5379

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 24   taatctaaacatgcttatatt 44
            |||||||||||||||||||||
Sbjct: 4479 taatctaaacatgcttatatt 4499
to top
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds
          Length = 7010

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    gagcatttagaacactattttagtaatctaaacatgcttatattagtttacagagggagt 60
            |||| ||||||  |||| |||||| ||||||||   |||||| ||||||||||| |||||
Sbjct: 1591 gagcgtttagattactactttagtgatctaaacgctcttatagtagtttacagacggagt 1650

             
Query: 61   a 61
            |
Sbjct: 1651 a 1651



 Score = 42.1 bits (21), Expect = 0.80
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 21   tagtaatctaaacatgcttatattagtttacagagggagta 61
            |||||||||||||   ||||||||| ||||| |||||||||
Sbjct: 1607 tagtaatctaaacgctcttatattaatttacggagggagta 1567
to top
>dbj|AK148812.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
           full-length enriched library, clone:7120449I22
           product:unclassifiable, full insert sequence
          Length = 900

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 40  atattagtttacagagggagt 60
           |||||||||||||||||||||
Sbjct: 266 atattagtttacagagggagt 286
to top
>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA,
           complete cds
          Length = 800

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 37  cttatattagtttacagagggagta 61
           ||||||||||||||| |||||||||
Sbjct: 719 cttatattagtttaccgagggagta 695
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 24      taatctaaacatgcttatatt 44
               |||||||||||||||||||||
Sbjct: 2120022 taatctaaacatgcttatatt 2120002



 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 37       cttatattagtttacagagggagtacat 64
                ||||||||||  ||||||||||||||||
Sbjct: 19895535 cttatattaggctacagagggagtacat 19895562
to top
>gb|AC093490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1127_B08,
             complete sequence
          Length = 112268

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    taatctaaacatgcttatatt 44
             |||||||||||||||||||||
Sbjct: 86863 taatctaaacatgcttatatt 86843
to top
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 37     cttatattagtttacagagggagt 60
              ||||||||||||||| ||||||||
Sbjct: 177684 cttatattagtttacggagggagt 177661
to top
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02,
             complete sequence
          Length = 178061

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 37    cttatattagtttacagagggagtacat 64
             ||||||||||  ||||||||||||||||
Sbjct: 36699 cttatattaggctacagagggagtacat 36726
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 97       aatgcacaaacttattctca 116
                ||||||||||||||||||||
Sbjct: 11563281 aatgcacaaacttattctca 11563262
to top
>emb|CT030567.1| Xenopus tropicalis finished cDNA, clone TNeu051d06
          Length = 1802

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 118  tgtgcattttgccaacctcc 137
            ||||||||||||||||||||
Sbjct: 1487 tgtgcattttgccaacctcc 1506
to top
>emb|AM075827.1| Triticum aestivum mRNA for beclin 1 protein (atg6 gene)
          Length = 2007

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   tttacagagggagtacatat 66
            ||||||||||||||||||||
Sbjct: 1906 tttacagagggagtacatat 1887
to top
>gb|AC140120.2| Homo sapiens 3 BAC RP11-106F4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 74350

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   ttttgccaacctcctgactctcaa 147
             |||||||| |||||||||||||||
Sbjct: 15285 ttttgccatcctcctgactctcaa 15308
to top
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23,
             complete sequence
          Length = 149892

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    aatctaaacatgcttatatt 44
             ||||||||||||||||||||
Sbjct: 97235 aatctaaacatgcttatatt 97254
to top
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 97     aatgcacaaacttattctca 116
              ||||||||||||||||||||
Sbjct: 113853 aatgcacaaacttattctca 113834
to top
>gb|AC109353.3| Homo sapiens BAC clone RP11-521B22 from 4, complete sequence
          Length = 54527

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    catatcaactttctactctt 81
             ||||||||||||||||||||
Sbjct: 49410 catatcaactttctactctt 49429
to top
>gb|AC034245.5| Homo sapiens chromosome 5 clone RP11-155L15, complete sequence
          Length = 158094

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 124   ttttgccaacctcctgactctcaa 147
             ||||||||||||||||| ||||||
Sbjct: 43560 ttttgccaacctcctgaatctcaa 43583
to top
>gb|AY036610.1| Triticum aestivum beclin1-like protein mRNA, complete cds
          Length = 1957

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   tttacagagggagtacatat 66
            ||||||||||||||||||||
Sbjct: 1856 tttacagagggagtacatat 1837
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 25       aatctaaacatgcttatatt 44
                ||||||||||||||||||||
Sbjct: 29294189 aatctaaacatgcttatatt 29294208
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 34       atgcttatattagtttacagagggagtacata 65
                ||||||||||| ||  ||||||||||||||||
Sbjct: 11883907 atgcttatatttgtggacagagggagtacata 11883938
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 47       tttacagagggagtacatat 66
                ||||||||||||||||||||
Sbjct: 23215335 tttacagagggagtacatat 23215316
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 97       aatgcacaaacttattctca 116
                ||||||||||||||||||||
Sbjct: 11560044 aatgcacaaacttattctca 11560025
to top
>gb|AC105914.4| Homo sapiens BAC clone RP13-577H12 from 4, complete sequence
          Length = 91995

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 21   tagtaatctaaacatgcttatatt 44
            |||||||||||| |||||||||||
Sbjct: 3101 tagtaatctaaatatgcttatatt 3078
to top
>gb|AC157484.2| Pan troglodytes BAC clone CH251-301F2 from chromosome unknown,
            complete sequence
          Length = 182330

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 124  ttttgccaacctcctgactctcaa 147
            ||||||||||||||||| ||||||
Sbjct: 3573 ttttgccaacctcctgaatctcaa 3550
to top
>gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, complete sequence
          Length = 214838

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 6      tttagaacactattttagta 25
              ||||||||||||||||||||
Sbjct: 197738 tttagaacactattttagta 197719
to top
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 37    cttatattagtttacagagggagtacat 64
             ||||||||||||||| |||| |||||||
Sbjct: 73074 cttatattagtttacggaggaagtacat 73047
to top
>gb|AC158671.3| Mus musculus 6 BAC RP23-62E15 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 218969

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    tttgcttacataatcccaaataca 194
              |||||| |||||||||||||||||
Sbjct: 188351 tttgctaacataatcccaaataca 188328
to top
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0642B07
          Length = 139297

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    tttacagagggagtacatat 66
             ||||||||||||||||||||
Sbjct: 50097 tttacagagggagtacatat 50078
to top
>dbj|AP003918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1705_A03
          Length = 168689

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 34     atgcttatattagtttacagagggagtacata 65
              ||||||||||| ||  ||||||||||||||||
Sbjct: 162192 atgcttatatttgtggacagagggagtacata 162223
to top
>dbj|AP005487.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1212_C09
          Length = 120818

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 34    atgcttatattagtttacagagggagtacata 65
             ||||||||||| ||  ||||||||||||||||
Sbjct: 33052 atgcttatatttgtggacagagggagtacata 33083
to top
>dbj|AK105421.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B11, full
            insert sequence
          Length = 2653

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   aatgcacaaacttattctca 116
            ||||||||||||||||||||
Sbjct: 2601 aatgcacaaacttattctca 2582


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,725,632
Number of Sequences: 3902068
Number of extensions: 1725632
Number of successful extensions: 31793
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31500
Number of HSP's gapped (non-prelim): 273
length of query: 245
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 223
effective length of database: 17,147,199,772
effective search space: 3823825549156
effective search space used: 3823825549156
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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