ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal23b13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
2dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
3ref|NM_185739.1| Oryza sativa (japonica cultivar-group), mRNA 113 6e-22
4gb|AY111161.1| Zea mays CL1533_1 mRNA sequence 84 5e-13
5gb|AF073522.1|AF073522 Zea mays CRP1 (crp1) mRNA, nuclear gene e... 84 5e-13
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
7dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
8dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
9gb|AY632900.1| Ruminococcus albus xylanase (xyn11C) gene, comple... 46 0.11
10gb|AF422696.1| Staphylococcus aureus strain HU25 SCCmec type III... 44 0.44
11dbj|AB037671.1| Staphylococcus aureus DNA, type III staphylococc... 44 0.44
12dbj|AB047089.2| Staphylococcus aureus DNA, right extremity of Ty... 44 0.44
13dbj|AB038513.1| Staphylococcus aureus DNA, SRImec-III and SCCmec... 44 0.44
14gb|BT014564.1| Lycopersicon esculentum clone 134018R, mRNA sequence 42 1.7
15ref|XM_724640.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 1.7
16ref|XM_674239.1| Plasmodium berghei strain ANKA hypothetical pro... 42 1.7
17gb|AC022541.11| Homo sapiens chromosome 10 clone RP11-4O7, compl... 42 1.7
18gb|AC069026.5| Homo sapiens chromosome 10 clone RP11-561F6, comp... 42 1.7
19gb|AC100784.2| Homo sapiens chromosome 8, clone RP11-116B19, com... 42 1.7
20emb|BX571675.5| Zebrafish DNA sequence from clone DKEY-235D17 in... 42 1.7
21emb|Z81039.1|CEC25D7 Caenorhabditis elegans Cosmid C25D7, comple... 42 1.7
22emb|AL132949.2|CEY53F4B Caenorhabditis elegans YAC Y53F4B, compl... 42 1.7
23gb|AC170423.1| Rhesus Macaque BAC CH250-107D17 (Children's Hosp... 40 6.9
24gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's H... 40 6.9
25gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
26gb|AE017263.1| Mesoplasma florum L1 complete genome 40 6.9
27gb|AY448010.1|AY448010S1 Ipomoea trifida haplotype S1 self-incom... 40 6.9
28emb|CT009691.8| Zebrafish DNA sequence from clone CH73-64E1 in l... 40 6.9
29emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA 40 6.9
30emb|Z81068.1|CEF25H5 Caenorhabditis elegans Cosmid F25H5, comple... 40 6.9
31emb|Z72518.1|CEZC374 Caenorhabditis elegans Cosmid ZC374, comple... 40 6.9
32emb|AL021497.1|CEY51A2D Caenorhabditis elegans YAC Y51A2D, compl... 40 6.9
33gb|AC004547.1| Homo sapiens PAC clone RP5-982C16 from 7, complet... 40 6.9
34gb|L07143.2| Caenorhabditis elegans cosmid B0523, complete sequence 40 6.9
35gb|AC141322.24| Medicago truncatula clone mth2-8e1, complete seq... 40 6.9
36gb|AC148292.8| Medicago truncatula clone mth2-15m24, complete se... 40 6.9
37gb|AC133571.47| Medicago truncatula clone mth2-10h12, complete s... 40 6.9
38emb|AL137145.13| Human DNA sequence from clone RP11-563J2 on chr... 40 6.9
39emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ... 40 6.9
40gb|DQ011584.1| Plasmodium cynomolgi Mulligan reticulocyte bindin... 40 6.9
41emb|BX649451.4| Zebrafish DNA sequence from clone DKEY-206M7 in ... 40 6.9
42gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; ... 40 6.9
43gb|AC092952.4| Homo sapiens 3 BAC RP11-332P22 (Roswell Park Canc... 40 6.9
44gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell P... 40 6.9
45gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell... 40 6.9
46gb|AC023738.3| Drosophila melanogaster X BAC RP98-6F4 (Roswell P... 40 6.9
47gb|AC079240.6| Homo sapiens BAC clone RP11-808H17 from 4, comple... 40 6.9
48gb|AF361326.1|AF361326 Folsomia candida labial gene, partial cds 40 6.9
49dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
50gb|AC016907.6| Homo sapiens BAC clone RP11-439P4 from 2, complet... 40 6.9
51gb|AC084414.2|AC084414 Arabidopsis thaliana chromosome 1 BAC F27... 40 6.9
52gb|AC092601.3| Homo sapiens BAC clone RP11-125M15 from 2, comple... 40 6.9
53gb|AY117382.1| Chrysomela lapponica haplotype ClapF mitochondria... 40 6.9
54gb|AC090952.3| Homo sapiens chromosome 3 clone RP11-588H7 map 3p... 40 6.9
55gb|U41625.1| Caenorhabditis elegans cosmid K03A1, complete sequence 40 6.9
56gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 ... 40 6.9
57gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 ... 40 6.9
58gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 ... 40 6.9
59dbj|AP003305.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 6.9
60emb|CR759821.9| Zebrafish DNA sequence from clone DKEY-190C14 in... 40 6.9
61dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s... 40 6.9
62dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ... 40 6.9
63dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl... 40 6.9
64emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chr... 40 6.9
65emb|AL831773.2| Mouse DNA sequence from clone RP23-296B1 on chro... 40 6.9 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                            
Query: 411      tctaaattgcctatgcaaccctcgtgtgtttcatatatcttaaagctgaacgcagcattg 470
                |||||||| |||||||||||||| |||||||||| ||||| |||||||| ||||||||||
Sbjct: 21703043 tctaaatttcctatgcaaccctcatgtgtttcatgtatctcaaagctgatcgcagcattg 21702984

                                               
Query: 471      ctctagctttgcggtcaggggcacatcctga 501
                |||||||||| || |||||||||||||||||
Sbjct: 21702983 ctctagcttttcgatcaggggcacatcctga 21702953
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score =  125 bits (63), Expect = 1e-25
 Identities = 84/91 (92%)
 Strand = Plus / Minus

                                                                         
Query: 411   tctaaattgcctatgcaaccctcgtgtgtttcatatatcttaaagctgaacgcagcattg 470
             |||||||| |||||||||||||| |||||||||| ||||| |||||||| ||||||||||
Sbjct: 20226 tctaaatttcctatgcaaccctcatgtgtttcatgtatctcaaagctgatcgcagcattg 20167

                                            
Query: 471   ctctagctttgcggtcaggggcacatcctga 501
             |||||||||| || |||||||||||||||||
Sbjct: 20166 ctctagcttttcgatcaggggcacatcctga 20136
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>ref|NM_185739.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1986

 Score =  113 bits (57), Expect = 6e-22
 Identities = 75/81 (92%)
 Strand = Plus / Minus

                                                                        
Query: 421  ctatgcaaccctcgtgtgtttcatatatcttaaagctgaacgcagcattgctctagcttt 480
            ||||||||||||| |||||||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 1986 ctatgcaaccctcatgtgtttcatgtatctcaaagctgatcgcagcattgctctagcttt 1927

                                 
Query: 481  gcggtcaggggcacatcctga 501
             || |||||||||||||||||
Sbjct: 1926 tcgatcaggggcacatcctga 1906
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>gb|AY111161.1| Zea mays CL1533_1 mRNA sequence
          Length = 2731

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 420  cctatgcaaccctcgtgtgtttcatatatcttaaagctgaacgcagcattgctctagctt 479
            |||||||||||||| ||||||| || ||| | ||| |||| |||||||||||||||||||
Sbjct: 2126 cctatgcaaccctcatgtgttttatgtatttcaaacctgaccgcagcattgctctagctt 2067

                                  
Query: 480  tgcggtcaggggcacatcctga 501
            | |  |||||||||||||||||
Sbjct: 2066 ttctatcaggggcacatcctga 2045
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>gb|AF073522.1|AF073522 Zea mays CRP1 (crp1) mRNA, nuclear gene encoding chloroplast protein,
            crp1-hcf111 allele, complete cds
          Length = 2716

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 420  cctatgcaaccctcgtgtgtttcatatatcttaaagctgaacgcagcattgctctagctt 479
            |||||||||||||| ||||||| || ||| | ||| |||| |||||||||||||||||||
Sbjct: 2126 cctatgcaaccctcatgtgttttatgtatttcaaacctgaccgcagcattgctctagctt 2067

                                  
Query: 480  tgcggtcaggggcacatcctga 501
            | |  |||||||||||||||||
Sbjct: 2066 ttctatcaggggcacatcctga 2045
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                              
Query: 435      tgtgtttcatatatcttaaagctgaacgcagcattgctctagcttt 480
                ||||||||||  ||| ||||||||| ||||||||||||||||||||
Sbjct: 18035319 tgtgtttcatccatcctaaagctgaccgcagcattgctctagcttt 18035364
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>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0054L14
          Length = 150022

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 435   tgtgtttcatatatcttaaagctgaacgcagcattgctctagcttt 480
             ||||||||||  ||| ||||||||| ||||||||||||||||||||
Sbjct: 62560 tgtgtttcatccatcctaaagctgaccgcagcattgctctagcttt 62605
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>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504D03
          Length = 139201

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 435   tgtgtttcatatatcttaaagctgaacgcagcattgctctagcttt 480
             ||||||||||  ||| ||||||||| ||||||||||||||||||||
Sbjct: 11760 tgtgtttcatccatcctaaagctgaccgcagcattgctctagcttt 11805
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>gb|AY632900.1| Ruminococcus albus xylanase (xyn11C) gene, complete cds
          Length = 1629

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 222  agcagtttatctgtcaggcagatggag 248
            ||||||||||||| |||||||||||||
Sbjct: 1443 agcagtttatctggcaggcagatggag 1469
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>gb|AF422696.1| Staphylococcus aureus strain HU25 SCCmec type III sequence between
            Tn554 and orfX
          Length = 9515

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 35   atatcaattccaaaaaatttaa 56
            ||||||||||||||||||||||
Sbjct: 7138 atatcaattccaaaaaatttaa 7117
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>dbj|AB037671.1| Staphylococcus aureus DNA, type III staphylococcal cassette chromosome
             mec, strain 85/2082
          Length = 68256

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    atatcaattccaaaaaatttaa 56
             ||||||||||||||||||||||
Sbjct: 65818 atatcaattccaaaaaatttaa 65797
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>dbj|AB047089.2| Staphylococcus aureus DNA, right extremity of Type-III SCCmec
             (Staphylococcal cassette chromosome mec) and it's flanking
             chromosomal region, strain:85/3907
          Length = 30059

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    atatcaattccaaaaaatttaa 56
             ||||||||||||||||||||||
Sbjct: 27618 atatcaattccaaaaaatttaa 27597
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>dbj|AB038513.1| Staphylococcus aureus DNA, SRImec-III and SCCmec-III region,
             strain:85/2082
          Length = 23752

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    atatcaattccaaaaaatttaa 56
             ||||||||||||||||||||||
Sbjct: 21314 atatcaattccaaaaaatttaa 21293
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>gb|BT014564.1| Lycopersicon esculentum clone 134018R, mRNA sequence
          Length = 2538

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 440  ttcatatatcttaaagctgaacgcagcattgctctagcttt 480
            ||||| ||||||||||| || || ||||| |||||||||||
Sbjct: 2126 ttcatgtatcttaaagcagatcgtagcatcgctctagcttt 2086
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>ref|XM_724640.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00194)
            partial mRNA
          Length = 3696

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 31   gccaatatcaattccaaaaaattta 55
            |||||||||||||| ||||||||||
Sbjct: 2488 gccaatatcaattctaaaaaattta 2512
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>ref|XM_674239.1| Plasmodium berghei strain ANKA hypothetical protein (PB000633.01.0)
            partial mRNA
          Length = 3822

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 45   caaaaaatttaatttgaattt 65
            |||||||||||||||||||||
Sbjct: 3267 caaaaaatttaatttgaattt 3287
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>gb|AC022541.11| Homo sapiens chromosome 10 clone RP11-4O7, complete sequence
          Length = 163179

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    aaatttaatttgaatttttga 69
             |||||||||||||||||||||
Sbjct: 49503 aaatttaatttgaatttttga 49483
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>gb|AC069026.5| Homo sapiens chromosome 10 clone RP11-561F6, complete sequence
          Length = 171142

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 49     aaatttaatttgaatttttga 69
              |||||||||||||||||||||
Sbjct: 151123 aaatttaatttgaatttttga 151103
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>gb|AC100784.2| Homo sapiens chromosome 8, clone RP11-116B19, complete sequence
          Length = 173811

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 391    tcagtgattagtgacttgtat 411
              |||||||||||||||||||||
Sbjct: 150257 tcagtgattagtgacttgtat 150237
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>emb|BX571675.5| Zebrafish DNA sequence from clone DKEY-235D17 in linkage group 11,
             complete sequence
          Length = 207497

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 309   atggcaaaatggcaaatgctg 329
             |||||||||||||||||||||
Sbjct: 79003 atggcaaaatggcaaatgctg 78983
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>emb|Z81039.1|CEC25D7 Caenorhabditis elegans Cosmid C25D7, complete sequence
          Length = 42361

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 40    aattccaaaaaatttaatttgaatttttg 68
             |||||||||||||||||||| | ||||||
Sbjct: 28876 aattccaaaaaatttaatttaagtttttg 28904
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>emb|AL132949.2|CEY53F4B Caenorhabditis elegans YAC Y53F4B, complete sequence
          Length = 227606

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    aaaaatttaatttgaattttt 67
             |||||||||||||||||||||
Sbjct: 79650 aaaaatttaatttgaattttt 79630
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>gb|AC170423.1| Rhesus Macaque  BAC CH250-107D17 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 167419

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 306   cacatggcaaaatggcaaatgctg 329
             |||||||||||| |||||||||||
Sbjct: 85415 cacatggcaaaagggcaaatgctg 85438
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>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 237425

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 362  acaagatcagcatagacatt 381
            ||||||||||||||||||||
Sbjct: 5264 acaagatcagcatagacatt 5283
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>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0093E24, complete sequence
          Length = 146492

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aaaatttaatttgaattttt 67
             ||||||||||||||||||||
Sbjct: 73912 aaaatttaatttgaattttt 73931
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>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 275    gacatgtcagcaaaagtaagattt 298
              ||||| ||||||||||||||||||
Sbjct: 746309 gacatttcagcaaaagtaagattt 746286
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>gb|AY448010.1|AY448010S1 Ipomoea trifida haplotype S1 self-incompatibility (S-) locus, contig
             SR1
          Length = 82054

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    atttaatttgaatttttgag 70
             ||||||||||||||||||||
Sbjct: 74577 atttaatttgaatttttgag 74596
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>emb|CT009691.8| Zebrafish DNA sequence from clone CH73-64E1 in linkage group 5,
             complete sequence
          Length = 99497

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   aaatgctggaattcagtacc 341
             ||||||||||||||||||||
Sbjct: 29965 aaatgctggaattcagtacc 29984
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>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    attccaaaaaatttaatttgaatt 64
             |||||||||||||||||| |||||
Sbjct: 84157 attccaaaaaatttaattagaatt 84180
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>emb|Z81068.1|CEF25H5 Caenorhabditis elegans Cosmid F25H5, complete sequence
          Length = 38692

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    aaaaaatttaatttgaatttttga 69
             ||||||||||| ||||||||||||
Sbjct: 32544 aaaaaatttaagttgaatttttga 32567
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>emb|Z72518.1|CEZC374 Caenorhabditis elegans Cosmid ZC374, complete sequence
          Length = 20600

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 39  caattccaaaaaatttaatt 58
           ||||||||||||||||||||
Sbjct: 501 caattccaaaaaatttaatt 482
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>emb|AL021497.1|CEY51A2D Caenorhabditis elegans YAC Y51A2D, complete sequence
          Length = 139259

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     aaaaatttaatttgaatttt 66
              ||||||||||||||||||||
Sbjct: 123580 aaaaatttaatttgaatttt 123561
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>gb|AC004547.1| Homo sapiens PAC clone RP5-982C16 from 7, complete sequence
          Length = 130632

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   tggcaaaatggcaaatgctg 329
             ||||||||||||||||||||
Sbjct: 67923 tggcaaaatggcaaatgctg 67904
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>gb|L07143.2| Caenorhabditis elegans cosmid B0523, complete sequence
          Length = 18334

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 47    aaaaatttaatttgaatttt 66
             ||||||||||||||||||||
Sbjct: 10476 aaaaatttaatttgaatttt 10457
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>gb|AC141322.24| Medicago truncatula clone mth2-8e1, complete sequence
          Length = 87559

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    caattccaaaaaatttaatttgaa 62
             ||||||||||| ||||||||||||
Sbjct: 47186 caattccaaaatatttaatttgaa 47163



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    caattccaaaaaatttaatttgaa 62
             ||||||||||| ||||||||||||
Sbjct: 42820 caattccaaaatatttaatttgaa 42797
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>gb|AC148292.8| Medicago truncatula clone mth2-15m24, complete sequence
          Length = 120077

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   ttcttctcctaaatgattac 192
             ||||||||||||||||||||
Sbjct: 22674 ttcttctcctaaatgattac 22655
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>gb|AC133571.47| Medicago truncatula clone mth2-10h12, complete sequence
          Length = 85905

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aatttaatttgaatttttga 69
             ||||||||||||||||||||
Sbjct: 84654 aatttaatttgaatttttga 84673
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>emb|AL137145.13| Human DNA sequence from clone RP11-563J2 on chromosome 10 Contains the
             3' end of the PRKCQ gene for protein kinase C, theta and a
             CpG island, complete sequence
          Length = 189767

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aaatttaatttgaatttttg 68
             ||||||||||||||||||||
Sbjct: 64248 aaatttaatttgaatttttg 64267
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>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    attccaaaaaatttaatttgaatt 64
             |||||||||||||||||| |||||
Sbjct: 84405 attccaaaaaatttaattagaatt 84428
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>gb|DQ011584.1| Plasmodium cynomolgi Mulligan reticulocyte binding protein 2 gene,
            complete cds
          Length = 9775

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 436  gtgtttcatatatcttaaag 455
            ||||||||||||||||||||
Sbjct: 9700 gtgtttcatatatcttaaag 9719
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>emb|BX649451.4| Zebrafish DNA sequence from clone DKEY-206M7 in linkage group 10,
             complete sequence
          Length = 97299

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ttatgggccaatatcaattc 44
             ||||||||||||||||||||
Sbjct: 58853 ttatgggccaatatcaattc 58834
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>gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; lozenge (lz) and c12.1
             genes, complete cds; and c12.2 gene, partial cds
          Length = 45142

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 46    aaaaaatttaatttgaatttttga 69
             |||||||||||||| |||||||||
Sbjct: 36491 aaaaaatttaatttaaatttttga 36468
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>gb|AC092952.4| Homo sapiens 3 BAC RP11-332P22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168234

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   ctctccttggtgcatagcct 143
             ||||||||||||||||||||
Sbjct: 38062 ctctccttggtgcatagcct 38081
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>gb|AC023705.4| Drosophila melanogaster X BAC RP98-7L6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184796

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    aaaaaatttaatttgaatttttga 69
             |||||||||||||| |||||||||
Sbjct: 67006 aaaaaatttaattttaatttttga 67029



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    aaaaaatttaatttgaatttttga 69
             |||||||||||||| |||||||||
Sbjct: 49380 aaaaaatttaatttcaatttttga 49403
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>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184334

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    aaaaaatttaatttgaatttttga 69
             |||||||||||||| |||||||||
Sbjct: 59003 aaaaaatttaatttaaatttttga 59026
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>gb|AC023738.3| Drosophila melanogaster X BAC RP98-6F4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 103196

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 46    aaaaaatttaatttgaatttttga 69
             |||||||||||||| |||||||||
Sbjct: 90105 aaaaaatttaatttaaatttttga 90082
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>gb|AC079240.6| Homo sapiens BAC clone RP11-808H17 from 4, complete sequence
          Length = 202847

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   tgatcagtgattagtgactt 407
             ||||||||||||||||||||
Sbjct: 58618 tgatcagtgattagtgactt 58599
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>gb|AF361326.1|AF361326 Folsomia candida labial gene, partial cds
          Length = 879

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 50  aatttaatttgaatttttga 69
           ||||||||||||||||||||
Sbjct: 497 aatttaatttgaatttttga 478
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 48      aaaatttaatttgaattttt 67
               ||||||||||||||||||||
Sbjct: 8151679 aaaatttaatttgaattttt 8151698
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>gb|AC016907.6| Homo sapiens BAC clone RP11-439P4 from 2, complete sequence
          Length = 202827

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 232   ctgtcaggcagatggagctt 251
             ||||||||||||||||||||
Sbjct: 23054 ctgtcaggcagatggagctt 23073
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>gb|AC084414.2|AC084414 Arabidopsis thaliana chromosome 1 BAC F27K7 genomic sequence, complete
             sequence
          Length = 54313

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    aaaaaatttaatttgaattt 65
             ||||||||||||||||||||
Sbjct: 30786 aaaaaatttaatttgaattt 30767
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>gb|AC092601.3| Homo sapiens BAC clone RP11-125M15 from 2, complete sequence
          Length = 198364

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    caaaaaatttaatttgaatt 64
             ||||||||||||||||||||
Sbjct: 62660 caaaaaatttaatttgaatt 62641
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>gb|AY117382.1| Chrysomela lapponica haplotype ClapF mitochondrial control region,
            complete sequence
          Length = 4640

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   aaaatttaatttgaattttt 67
            ||||||||||||||||||||
Sbjct: 1205 aaaatttaatttgaattttt 1224
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>gb|AC090952.3| Homo sapiens chromosome 3 clone RP11-588H7 map 3p, complete sequence
          Length = 189723

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    caaaatggcaaatgctggaa 332
              ||||||||||||||||||||
Sbjct: 127196 caaaatggcaaatgctggaa 127177
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>gb|U41625.1| Caenorhabditis elegans cosmid K03A1, complete sequence
          Length = 35227

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    aaaaatttaatttgaatttt 66
             ||||||||||||||||||||
Sbjct: 34259 aaaaatttaatttgaatttt 34278
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>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete
              sequence
          Length = 307201

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 46     aaaaaatttaatttgaatttttga 69
              |||||||||||||| |||||||||
Sbjct: 173656 aaaaaatttaatttcaatttttga 173633



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 46     aaaaaatttaatttgaatttttga 69
              |||||||||||||| |||||||||
Sbjct: 156030 aaaaaatttaattttaatttttga 156007
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>gb|AE003447.5| Drosophila melanogaster chromosome X, section 31 of 74 of the complete
             sequence
          Length = 288721

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    aaaaaatttaatttgaatttttga 69
             |||||||||||||| |||||||||
Sbjct: 34627 aaaaaatttaatttaaatttttga 34650
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>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
              sequence
          Length = 290970

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 46     aaaaaatttaatttgaatttttga 69
              |||||||||||||| |||||||||
Sbjct: 264718 aaaaaatttaatttaaatttttga 264695
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>dbj|AP003305.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-667E8, complete
             sequence
          Length = 134764

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   catggcaaaatggcaaatgc 327
             ||||||||||||||||||||
Sbjct: 79388 catggcaaaatggcaaatgc 79407
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>emb|CR759821.9| Zebrafish DNA sequence from clone DKEY-190C14 in linkage group 5,
             complete sequence
          Length = 169089

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   aaatgctggaattcagtacc 341
             ||||||||||||||||||||
Sbjct: 22005 aaatgctggaattcagtacc 22024
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>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    attccaaaaaatttaatttgaatt 64
             |||||||||||||||||| |||||
Sbjct: 84155 attccaaaaaatttaattagaatt 84178
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>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 46    aaaaaatttaatttgaatttttga 69
             |||||||||||||| |||||||||
Sbjct: 59824 aaaaaatttaatttaaatttttga 59801
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>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 41    attccaaaaaatttaatttgaatt 64
             |||| |||||||||||||||||||
Sbjct: 83925 attcaaaaaaatttaatttgaatt 83948
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>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete
              sequence
          Length = 192322

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     aaaatttaatttgaattttt 67
              ||||||||||||||||||||
Sbjct: 104303 aaaatttaatttgaattttt 104284
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>emb|AL831773.2| Mouse DNA sequence from clone RP23-296B1 on chromosome 4, complete
             sequence
          Length = 154298

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    aaaaaatttaatttgaattt 65
             ||||||||||||||||||||
Sbjct: 63795 aaaaaatttaatttgaattt 63776


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,472,225
Number of Sequences: 3902068
Number of extensions: 5472225
Number of successful extensions: 114733
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114411
Number of HSP's gapped (non-prelim): 322
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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