ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal23b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470012.1| Oryza sativa (japonica cultivar-group), mRNA 262 1e-66
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 256 6e-65
3gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genom... 256 6e-65
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 256 6e-65
5ref|XM_470017.1| Oryza sativa (japonica cultivar-group), mRNA 198 1e-47
6ref|XM_470014.1| Oryza sativa (japonica cultivar-group), mRNA 198 1e-47
7ref|XM_470018.1| Oryza sativa (japonica cultivar-group), mRNA 186 5e-44
8ref|XM_470015.1| Oryza sativa (japonica cultivar-group), mRNA 186 5e-44
9gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genom... 184 2e-43
10ref|XM_470013.1| Oryza sativa (japonica cultivar-group), mRNA 159 1e-35
11gb|AY109924.1| Zea mays CL64795_1 mRNA sequence 159 1e-35
12ref|XM_470021.1| Oryza sativa (japonica cultivar-group), mRNA 107 3e-20
13ref|XM_960207.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.11
14ref|XM_330635.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.11
15emb|BX950251.1| Gallus gallus finished cDNA, clone ChEST706m10 44 0.43
16gb|AY023913.1| Oryza sativa microsatellite MRG6238 containing (A... 42 1.7
17gb|AY023910.1| Oryza sativa microsatellite MRG6235 containing (A... 42 1.7
18gb|AC007865.8| Trypanosoma brucei chromosome 2 clone RPCI93-30M2... 42 1.7
19gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 42 1.7
20ref|XM_946581.1| Trypanosoma brucei TREU927 hypothetical protein... 42 1.7
21emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 1.7
22gb|AC132336.3| Mus musculus BAC clone RP24-230N9 from chromosome... 42 1.7
23gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.7
24gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, comp... 42 1.7
25gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, comp... 42 1.7
26gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 42 1.7
27emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chr... 42 1.7
28ref|NM_116749.2| Arabidopsis thaliana DNA binding / transcriptio... 40 6.7
29gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 40 6.7
30gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome 40 6.7
31gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome 40 6.7
32gb|AE006492.1| Streptococcus pyogenes M1 GAS, section 21 of 167 ... 40 6.7
33gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 40 6.7
34gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome 40 6.7
35gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome 40 6.7
36gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome 40 6.7
37gb|AC121286.7| Mus musculus chromosome 12, clone RP23-36H21, com... 40 6.7
38gb|AY519603.1| Arabidopsis thaliana MYB transcription factor (At... 40 6.7
39gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosom... 40 6.7
40gb|AC121782.3| Mus musculus BAC clone RP23-367M7 from chromosome... 40 6.7
41gb|AC122212.2| Mus musculus BAC clone RP23-99K17 from 10, comple... 40 6.7
42gb|AC087903.26| Mus musculus strain C57BL/6J clone rp23-4p7 map ... 40 6.7
43gb|AC087062.25| Mus musculus strain C57BL/6J clone rp23-15p14 ma... 40 6.7
44gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome 40 6.7
45gb|DQ366728.1| Uncultured Prochlorococcus marinus clone HF10-88H... 40 6.7
46emb|AL356784.12| Human DNA sequence from clone RP5-1108C9 on chr... 40 6.7
47emb|X05630.1|RCPETG Rhodopseudomonas capsulata petABC operon 40 6.7
48gb|AC157546.7| Mus musculus chromosome 19, clone RP23-325I11, co... 40 6.7
49emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, ... 40 6.7
50emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, com... 40 6.7
51gb|AE009971.1| Streptococcus pyogenes strain MGAS8232, section 1... 40 6.7
52dbj|AB169155.1| Macaca fascicularis testis cDNA, clone: QtsA-176... 40 6.7
53gb|AF386932.1|AF386932 Arabidopsis thaliana Unknown protein mRNA... 40 6.7
54gb|BC095599.1| Danio rerio plasticin, mRNA (cDNA clone MGC:11192... 40 6.7
55gb|AC152945.1| Mus musculus 10 BAC RP23-257F18 (Roswell Park Can... 40 6.7
56gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Can... 40 6.7
57gb|AF202967.1|AF202967 Schistosoma mansoni clone 3 microsatellit... 40 6.7
58gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosom... 40 6.7
59gb|AC158165.1| Mus musculus BAC clone RP23-462M21 from chromosom... 40 6.7
60gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome 40 6.7
61dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome 40 6.7
62emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.7
63gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana... 40 6.7
64gb|AF062907.1|AF062907 Arabidopsis thaliana putative transcripti... 40 6.7
65gb|AC122763.9| Mus musculus chromosome 19, clone RP24-68F2, comp... 40 6.7
66gb|AC139185.5| Mus musculus BAC clone RP24-91B1 from 6, complete... 40 6.7
67gb|BT001182.1| Arabidopsis thaliana Unknown protein (At4g05100) ... 40 6.7
68emb|AL591711.22| Mouse DNA sequence from clone RP23-19L12 on chr... 40 6.7 
>ref|XM_470012.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1912

 Score =  262 bits (132), Expect = 1e-66
 Identities = 237/272 (87%)
 Strand = Plus / Minus

                                                                        
Query: 188  tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
            ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 1670 tcacttgtaagcatggacgtagtcctggaaatagaagttcttctcgatgaagttggcgag 1611

                                                                        
Query: 248  ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
            ||||||||| ||||||||||||||||| |||   | ||||||||||| ||||||||| ||
Sbjct: 1610 ccagcgggaggcggcgaagcacagcacggccgcagccacgacggcggatctctgcacaac 1551

                                                                        
Query: 308  cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
            |||||| || |  |||||||||||||| || ||||| |||||||| || |||||||| ||
Sbjct: 1550 cgacgtgaccaccgtccccttggcgacggcgaggaacccgacgacggcgaccgacgccac 1491

                                                                        
Query: 368  ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
            ||||||||| ||||||||||| |||||  ||||||| ||   |||||||||| |||||||
Sbjct: 1490 ctgcagggcgacctccagcgccttcatcttcttcagtgcaccgctgcagctcgtgcactg 1431

                                            
Query: 428  cgcgacgtgcgaccagtacctctccatgagct 459
            |  |||||||||||| ||||| |||| |||||
Sbjct: 1430 catgacgtgcgaccaatacctgtccaagagct 1399
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  256 bits (129), Expect = 6e-65
 Identities = 228/261 (87%)
 Strand = Plus / Minus

                                                                            
Query: 188      tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
                ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 33336982 tcacttgtaagcatggacgtagtcctggaaatagaagttcttctcgatgaagttggcgag 33336923

                                                                            
Query: 248      ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
                ||||||||| ||||||||||||||||| |||   | ||||||||||| ||||||||| ||
Sbjct: 33336922 ccagcgggaggcggcgaagcacagcacggccgcagccacgacggcggatctctgcacaac 33336863

                                                                            
Query: 308      cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
                |||||| || |  |||||||||||||| || ||||| |||||||| || |||||||| ||
Sbjct: 33336862 cgacgtgaccaccgtccccttggcgacggcgaggaacccgacgacggcgaccgacgccac 33336803

                                                                            
Query: 368      ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
                ||||||||| ||||||||||| |||||  ||||||| ||   |||||||||| |||||||
Sbjct: 33336802 ctgcagggcgacctccagcgccttcatcttcttcagtgcaccgctgcagctcgtgcactg 33336743

                                     
Query: 428      cgcgacgtgcgaccagtacct 448
                |  |||||||||||| |||||
Sbjct: 33336742 catgacgtgcgaccaatacct 33336722



 Score =  184 bits (93), Expect = 2e-43
 Identities = 219/261 (83%)
 Strand = Plus / Minus

                                                                            
Query: 188      tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
                ||||||||| ||||||||||| |||||||| |||||| ||||||| |||||||| |||||
Sbjct: 33349831 tcacttgtaagcatggacgtagtcctggaagtagaagctcttctcaatgaagctcgcgag 33349772

                                                                            
Query: 248      ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
                ||||||||| ||||||||||||||||| ||    | |||| ||||||||| | | || ||
Sbjct: 33349771 ccagcgggaggcggcgaagcacagcacggcggtagacacggcggcggctcgccggacaac 33349712

                                                                            
Query: 308      cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
                |||||   ||||  ||||||||||||| || ||||| |||||||  || |||||||| ||
Sbjct: 33349711 cgacggtgctagactccccttggcgacggcgaggaatccgacgatggcgaccgacgccac 33349652

                                                                            
Query: 368      ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
                ||||||||| ||||||||||| |||||  ||||||| || | |||||||||| |||||||
Sbjct: 33349651 ctgcagggcgacctccagcgccttcatcttcttcagtgcagcgctgcagctcgtgcactg 33349592

                                     
Query: 428      cgcgacgtgcgaccagtacct 448
                |  ||| ||||||| ||||||
Sbjct: 33349591 catgacatgcgacctgtacct 33349571



 Score =  180 bits (91), Expect = 3e-42
 Identities = 202/239 (84%)
 Strand = Plus / Minus

                                                                            
Query: 210      tcctggaaatagaagttcttctcgatgaagctggcgagccagcgggacgcggcgaagcac 269
                |||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 33358008 tcctcgaaatagaaggtcttctcgatgaagccggcgagccagcgggaggcggcgaagcac 33357949

                                                                            
Query: 270      agcaccgccaatgtcacgacggcggctctctgcacgaccgacgtcactagtgtccccttg 329
                |||||||||   | |||||||||||||||||| ||  ||||||| || |  |||||||||
Sbjct: 33357948 agcaccgccgcagccacgacggcggctctctgaacacccgacgtgaccaccgtccccttg 33357889

                                                                            
Query: 330      gcgaccgcaaggaaaccgacgaccgccaccgacgcgacctgcagggcaacctccagcgct 389
                 || | || ||||| |||||||| || ||||| || ||||||||||| |||||||| |||
Sbjct: 33357888 ccggcggcgaggaacccgacgacggcgaccgaagccacctgcagggcgacctccagagct 33357829

                                                                           
Query: 390      ttcatggtcttcagcgccgtgctgcagctcctgcactgcgcgacgtgcgaccagtacct 448
                 ||||   |||||| || | |||||||||| ||||||||  ||| ||||||||||||||
Sbjct: 33357828 ctcatccacttcagtgcagcgctgcagctcgtgcactgcatgacatgcgaccagtacct 33357770



 Score =  129 bits (65), Expect = 9e-27
 Identities = 216/264 (81%), Gaps = 3/264 (1%)
 Strand = Plus / Minus

                                                                            
Query: 188      tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
                ||||||||| |||||||| || |||||||| |||||| | |||||||||||| |||||||
Sbjct: 33343595 tcacttgtaagcatggacatagtcctggaagtagaagcttttctcgatgaagttggcgag 33343536

                                                                            
Query: 248      ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
                ||||||||| || |||||||||||| | |||   | |||||||||||||||||| ||  |
Sbjct: 33343535 ccagcgggaggcagcgaagcacagcgcggccgcagccacgacggcggctctctgaaccgc 33343476

                                                                            
Query: 308      cgacgtcacta--gt-gtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgc 364
                |||||| || |  || ||||||||| || | || ||||| |||||||| || ||||||||
Sbjct: 33343475 cgacgtgaccaccgtcgtccccttgccggcggcgaggaacccgacgacggcgaccgacgc 33343416

                                                                            
Query: 365      gacctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgca 424
                 |||||||| || ||||||| |||  ||||   |||||| || | |||||||||  ||||
Sbjct: 33343415 cacctgcagtgcgacctccatcgccctcatccacttcagtgcagcgctgcagctggtgca 33343356

                                        
Query: 425      ctgcgcgacgtgcgaccagtacct 448
                ||||  ||| || |||||||||||
Sbjct: 33343355 ctgcatgacatgtgaccagtacct 33343332



 Score =  107 bits (54), Expect = 3e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                            
Query: 198      gcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgagccagcgggac 257
                |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| 
Sbjct: 33383523 gcatggacataatcctggaaatagaaggtcttctcgatgaagttggcgagccagcgggag 33383464

                          
Query: 258      gcggcgaagc 267
                ||||||||||
Sbjct: 33383463 gcggcgaagc 33383454



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 444      tacctctccatgagcttgtctttggttggagt 475
                ||||||||||||||||  |||||||| |||||
Sbjct: 33343225 tacctctccatgagctgatctttggtaggagt 33343194
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>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete
             sequence
          Length = 122815

 Score =  256 bits (129), Expect = 6e-65
 Identities = 228/261 (87%)
 Strand = Plus / Minus

                                                                         
Query: 188   tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
             ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 93498 tcacttgtaagcatggacgtagtcctggaaatagaagttcttctcgatgaagttggcgag 93439

                                                                         
Query: 248   ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
             ||||||||| ||||||||||||||||| |||   | ||||||||||| ||||||||| ||
Sbjct: 93438 ccagcgggaggcggcgaagcacagcacggccgcagccacgacggcggatctctgcacaac 93379

                                                                         
Query: 308   cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
             |||||| || |  |||||||||||||| || ||||| |||||||| || |||||||| ||
Sbjct: 93378 cgacgtgaccaccgtccccttggcgacggcgaggaacccgacgacggcgaccgacgccac 93319

                                                                         
Query: 368   ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
             ||||||||| ||||||||||| |||||  ||||||| ||   |||||||||| |||||||
Sbjct: 93318 ctgcagggcgacctccagcgccttcatcttcttcagtgcaccgctgcagctcgtgcactg 93259

                                  
Query: 428   cgcgacgtgcgaccagtacct 448
             |  |||||||||||| |||||
Sbjct: 93258 catgacgtgcgaccaatacct 93238



 Score =  184 bits (93), Expect = 2e-43
 Identities = 219/261 (83%)
 Strand = Plus / Minus

                                                                          
Query: 188    tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
              ||||||||| ||||||||||| |||||||| |||||| ||||||| |||||||| |||||
Sbjct: 106347 tcacttgtaagcatggacgtagtcctggaagtagaagctcttctcaatgaagctcgcgag 106288

                                                                          
Query: 248    ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
              ||||||||| ||||||||||||||||| ||    | |||| ||||||||| | | || ||
Sbjct: 106287 ccagcgggaggcggcgaagcacagcacggcggtagacacggcggcggctcgccggacaac 106228

                                                                          
Query: 308    cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
              |||||   ||||  ||||||||||||| || ||||| |||||||  || |||||||| ||
Sbjct: 106227 cgacggtgctagactccccttggcgacggcgaggaatccgacgatggcgaccgacgccac 106168

                                                                          
Query: 368    ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
              ||||||||| ||||||||||| |||||  ||||||| || | |||||||||| |||||||
Sbjct: 106167 ctgcagggcgacctccagcgccttcatcttcttcagtgcagcgctgcagctcgtgcactg 106108

                                   
Query: 428    cgcgacgtgcgaccagtacct 448
              |  ||| ||||||| ||||||
Sbjct: 106107 catgacatgcgacctgtacct 106087



 Score =  180 bits (91), Expect = 3e-42
 Identities = 202/239 (84%)
 Strand = Plus / Minus

                                                                          
Query: 210    tcctggaaatagaagttcttctcgatgaagctggcgagccagcgggacgcggcgaagcac 269
              |||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 114524 tcctcgaaatagaaggtcttctcgatgaagccggcgagccagcgggaggcggcgaagcac 114465

                                                                          
Query: 270    agcaccgccaatgtcacgacggcggctctctgcacgaccgacgtcactagtgtccccttg 329
              |||||||||   | |||||||||||||||||| ||  ||||||| || |  |||||||||
Sbjct: 114464 agcaccgccgcagccacgacggcggctctctgaacacccgacgtgaccaccgtccccttg 114405

                                                                          
Query: 330    gcgaccgcaaggaaaccgacgaccgccaccgacgcgacctgcagggcaacctccagcgct 389
               || | || ||||| |||||||| || ||||| || ||||||||||| |||||||| |||
Sbjct: 114404 ccggcggcgaggaacccgacgacggcgaccgaagccacctgcagggcgacctccagagct 114345

                                                                         
Query: 390    ttcatggtcttcagcgccgtgctgcagctcctgcactgcgcgacgtgcgaccagtacct 448
               ||||   |||||| || | |||||||||| ||||||||  ||| ||||||||||||||
Sbjct: 114344 ctcatccacttcagtgcagcgctgcagctcgtgcactgcatgacatgcgaccagtacct 114286



 Score =  129 bits (65), Expect = 9e-27
 Identities = 216/264 (81%), Gaps = 3/264 (1%)
 Strand = Plus / Minus

                                                                          
Query: 188    tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
              ||||||||| |||||||| || |||||||| |||||| | |||||||||||| |||||||
Sbjct: 100111 tcacttgtaagcatggacatagtcctggaagtagaagcttttctcgatgaagttggcgag 100052

                                                                          
Query: 248    ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
              ||||||||| || |||||||||||| | |||   | |||||||||||||||||| ||  |
Sbjct: 100051 ccagcgggaggcagcgaagcacagcgcggccgcagccacgacggcggctctctgaaccgc 99992

                                                                          
Query: 308    cgacgtcacta--gt-gtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgc 364
              |||||| || |  || ||||||||| || | || ||||| |||||||| || ||||||||
Sbjct: 99991  cgacgtgaccaccgtcgtccccttgccggcggcgaggaacccgacgacggcgaccgacgc 99932

                                                                          
Query: 365    gacctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgca 424
               |||||||| || ||||||| |||  ||||   |||||| || | |||||||||  ||||
Sbjct: 99931  cacctgcagtgcgacctccatcgccctcatccacttcagtgcagcgctgcagctggtgca 99872

                                      
Query: 425    ctgcgcgacgtgcgaccagtacct 448
              ||||  ||| || |||||||||||
Sbjct: 99871  ctgcatgacatgtgaccagtacct 99848



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 444   tacctctccatgagcttgtctttggttggagt 475
             ||||||||||||||||  |||||||| |||||
Sbjct: 99741 tacctctccatgagctgatctttggtaggagt 99710
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  256 bits (129), Expect = 6e-65
 Identities = 228/261 (87%)
 Strand = Plus / Minus

                                                                            
Query: 188      tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
                ||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 33427492 tcacttgtaagcatggacgtagtcctggaaatagaagttcttctcgatgaagttggcgag 33427433

                                                                            
Query: 248      ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
                ||||||||| ||||||||||||||||| |||   | ||||||||||| ||||||||| ||
Sbjct: 33427432 ccagcgggaggcggcgaagcacagcacggccgcagccacgacggcggatctctgcacaac 33427373

                                                                            
Query: 308      cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
                |||||| || |  |||||||||||||| || ||||| |||||||| || |||||||| ||
Sbjct: 33427372 cgacgtgaccaccgtccccttggcgacggcgaggaacccgacgacggcgaccgacgccac 33427313

                                                                            
Query: 368      ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
                ||||||||| ||||||||||| |||||  ||||||| ||   |||||||||| |||||||
Sbjct: 33427312 ctgcagggcgacctccagcgccttcatcttcttcagtgcaccgctgcagctcgtgcactg 33427253

                                     
Query: 428      cgcgacgtgcgaccagtacct 448
                |  |||||||||||| |||||
Sbjct: 33427252 catgacgtgcgaccaatacct 33427232



 Score =  184 bits (93), Expect = 2e-43
 Identities = 219/261 (83%)
 Strand = Plus / Minus

                                                                            
Query: 188      tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
                ||||||||| ||||||||||| |||||||| |||||| ||||||| |||||||| |||||
Sbjct: 33440341 tcacttgtaagcatggacgtagtcctggaagtagaagctcttctcaatgaagctcgcgag 33440282

                                                                            
Query: 248      ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
                ||||||||| ||||||||||||||||| ||    | |||| ||||||||| | | || ||
Sbjct: 33440281 ccagcgggaggcggcgaagcacagcacggcggtagacacggcggcggctcgccggacaac 33440222

                                                                            
Query: 308      cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
                |||||   ||||  ||||||||||||| || ||||| |||||||  || |||||||| ||
Sbjct: 33440221 cgacggtgctagactccccttggcgacggcgaggaatccgacgatggcgaccgacgccac 33440162

                                                                            
Query: 368      ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
                ||||||||| ||||||||||| |||||  ||||||| || | |||||||||| |||||||
Sbjct: 33440161 ctgcagggcgacctccagcgccttcatcttcttcagtgcagcgctgcagctcgtgcactg 33440102

                                     
Query: 428      cgcgacgtgcgaccagtacct 448
                |  ||| ||||||| ||||||
Sbjct: 33440101 catgacatgcgacctgtacct 33440081



 Score =  180 bits (91), Expect = 3e-42
 Identities = 202/239 (84%)
 Strand = Plus / Minus

                                                                            
Query: 210      tcctggaaatagaagttcttctcgatgaagctggcgagccagcgggacgcggcgaagcac 269
                |||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 33448518 tcctcgaaatagaaggtcttctcgatgaagccggcgagccagcgggaggcggcgaagcac 33448459

                                                                            
Query: 270      agcaccgccaatgtcacgacggcggctctctgcacgaccgacgtcactagtgtccccttg 329
                |||||||||   | |||||||||||||||||| ||  ||||||| || |  |||||||||
Sbjct: 33448458 agcaccgccgcagccacgacggcggctctctgaacacccgacgtgaccaccgtccccttg 33448399

                                                                            
Query: 330      gcgaccgcaaggaaaccgacgaccgccaccgacgcgacctgcagggcaacctccagcgct 389
                 || | || ||||| |||||||| || ||||| || ||||||||||| |||||||| |||
Sbjct: 33448398 ccggcggcgaggaacccgacgacggcgaccgaagccacctgcagggcgacctccagagct 33448339

                                                                           
Query: 390      ttcatggtcttcagcgccgtgctgcagctcctgcactgcgcgacgtgcgaccagtacct 448
                 ||||   |||||| || | |||||||||| ||||||||  ||| ||||||||||||||
Sbjct: 33448338 ctcatccacttcagtgcagcgctgcagctcgtgcactgcatgacatgcgaccagtacct 33448280



 Score =  129 bits (65), Expect = 9e-27
 Identities = 216/264 (81%), Gaps = 3/264 (1%)
 Strand = Plus / Minus

                                                                            
Query: 188      tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
                ||||||||| |||||||| || |||||||| |||||| | |||||||||||| |||||||
Sbjct: 33434105 tcacttgtaagcatggacatagtcctggaagtagaagcttttctcgatgaagttggcgag 33434046

                                                                            
Query: 248      ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
                ||||||||| || |||||||||||| | |||   | |||||||||||||||||| ||  |
Sbjct: 33434045 ccagcgggaggcagcgaagcacagcgcggccgcagccacgacggcggctctctgaaccgc 33433986

                                                                            
Query: 308      cgacgtcacta--gt-gtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgc 364
                |||||| || |  || ||||||||| || | || ||||| |||||||| || ||||||||
Sbjct: 33433985 cgacgtgaccaccgtcgtccccttgccggcggcgaggaacccgacgacggcgaccgacgc 33433926

                                                                            
Query: 365      gacctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgca 424
                 |||||||| || ||||||| |||  ||||   |||||| || | |||||||||  ||||
Sbjct: 33433925 cacctgcagtgcgacctccatcgccctcatccacttcagtgcagcgctgcagctggtgca 33433866

                                        
Query: 425      ctgcgcgacgtgcgaccagtacct 448
                ||||  ||| || |||||||||||
Sbjct: 33433865 ctgcatgacatgtgaccagtacct 33433842



 Score =  107 bits (54), Expect = 3e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                            
Query: 198      gcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgagccagcgggac 257
                |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| 
Sbjct: 33474033 gcatggacataatcctggaaatagaaggtcttctcgatgaagttggcgagccagcgggag 33473974

                          
Query: 258      gcggcgaagc 267
                ||||||||||
Sbjct: 33473973 gcggcgaagc 33473964



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 444      tacctctccatgagcttgtctttggttggagt 475
                ||||||||||||||||  |||||||| |||||
Sbjct: 33433735 tacctctccatgagctgatctttggtaggagt 33433704
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>ref|XM_470017.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1668

 Score =  198 bits (100), Expect = 1e-47
 Identities = 241/288 (83%)
 Strand = Plus / Minus

                                                                        
Query: 188  tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
            ||||||||| ||||||||||| |||||||| |||||| ||||||| |||||||| |||||
Sbjct: 1668 tcacttgtaagcatggacgtagtcctggaagtagaagctcttctcaatgaagctcgcgag 1609

                                                                        
Query: 248  ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
            ||||||||| ||||||||||||||||| ||    | |||| ||||||||| | | || ||
Sbjct: 1608 ccagcgggaggcggcgaagcacagcacggcggtagacacggcggcggctcgccggacaac 1549

                                                                        
Query: 308  cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
            |||||   ||||  ||||||||||||| || ||||| |||||||  || |||||||| ||
Sbjct: 1548 cgacggtgctagactccccttggcgacggcgaggaatccgacgatggcgaccgacgccac 1489

                                                                        
Query: 368  ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
            ||||||||| ||||||||||| |||||  ||||||| || | |||||||||| |||||||
Sbjct: 1488 ctgcagggcgacctccagcgccttcatcttcttcagtgcagcgctgcagctcgtgcactg 1429

                                                            
Query: 428  cgcgacgtgcgaccagtacctctccatgagcttgtctttggttggagt 475
            |  ||| ||||||| ||||||||||| || ||  |||||||| |||||
Sbjct: 1428 catgacatgcgacctgtacctctccaagacctgatctttggtaggagt 1381
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>ref|XM_470014.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1659

 Score =  198 bits (100), Expect = 1e-47
 Identities = 241/288 (83%)
 Strand = Plus / Minus

                                                                        
Query: 188  tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
            ||||||||| ||||||||||| |||||||| |||||| ||||||| |||||||| |||||
Sbjct: 1659 tcacttgtaagcatggacgtagtcctggaagtagaagctcttctcaatgaagctcgcgag 1600

                                                                        
Query: 248  ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
            ||||||||| ||||||||||||||||| ||    | |||| ||||||||| | | || ||
Sbjct: 1599 ccagcgggaggcggcgaagcacagcacggcggtagacacggcggcggctcgccggacaac 1540

                                                                        
Query: 308  cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
            |||||   ||||  ||||||||||||| || ||||| |||||||  || |||||||| ||
Sbjct: 1539 cgacggtgctagactccccttggcgacggcgaggaatccgacgatggcgaccgacgccac 1480

                                                                        
Query: 368  ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
            ||||||||| ||||||||||| |||||  ||||||| || | |||||||||| |||||||
Sbjct: 1479 ctgcagggcgacctccagcgccttcatcttcttcagtgcagcgctgcagctcgtgcactg 1420

                                                            
Query: 428  cgcgacgtgcgaccagtacctctccatgagcttgtctttggttggagt 475
            |  ||| ||||||| ||||||||||| || ||  |||||||| |||||
Sbjct: 1419 catgacatgcgacctgtacctctccaagacctgatctttggtaggagt 1372
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>ref|XM_470018.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1578

 Score =  186 bits (94), Expect = 5e-44
 Identities = 205/242 (84%)
 Strand = Plus / Minus

                                                                        
Query: 210  tcctggaaatagaagttcttctcgatgaagctggcgagccagcgggacgcggcgaagcac 269
            |||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 1556 tcctcgaaatagaaggtcttctcgatgaagccggcgagccagcgggaggcggcgaagcac 1497

                                                                        
Query: 270  agcaccgccaatgtcacgacggcggctctctgcacgaccgacgtcactagtgtccccttg 329
            |||||||||   | |||||||||||||||||| ||  ||||||| || |  |||||||||
Sbjct: 1496 agcaccgccgcagccacgacggcggctctctgaacacccgacgtgaccaccgtccccttg 1437

                                                                        
Query: 330  gcgaccgcaaggaaaccgacgaccgccaccgacgcgacctgcagggcaacctccagcgct 389
             || | || ||||| |||||||| || ||||| || ||||||||||| |||||||| |||
Sbjct: 1436 ccggcggcgaggaacccgacgacggcgaccgaagccacctgcagggcgacctccagagct 1377

                                                                        
Query: 390  ttcatggtcttcagcgccgtgctgcagctcctgcactgcgcgacgtgcgaccagtacctc 449
             ||||   |||||| || | |||||||||| ||||||||  ||| |||||||||||||||
Sbjct: 1376 ctcatccacttcagtgcagcgctgcagctcgtgcactgcatgacatgcgaccagtacctc 1317

              
Query: 450  tc 451
            ||
Sbjct: 1316 tc 1315
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>ref|XM_470015.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1566

 Score =  186 bits (94), Expect = 5e-44
 Identities = 205/242 (84%)
 Strand = Plus / Minus

                                                                        
Query: 210  tcctggaaatagaagttcttctcgatgaagctggcgagccagcgggacgcggcgaagcac 269
            |||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 1544 tcctcgaaatagaaggtcttctcgatgaagccggcgagccagcgggaggcggcgaagcac 1485

                                                                        
Query: 270  agcaccgccaatgtcacgacggcggctctctgcacgaccgacgtcactagtgtccccttg 329
            |||||||||   | |||||||||||||||||| ||  ||||||| || |  |||||||||
Sbjct: 1484 agcaccgccgcagccacgacggcggctctctgaacacccgacgtgaccaccgtccccttg 1425

                                                                        
Query: 330  gcgaccgcaaggaaaccgacgaccgccaccgacgcgacctgcagggcaacctccagcgct 389
             || | || ||||| |||||||| || ||||| || ||||||||||| |||||||| |||
Sbjct: 1424 ccggcggcgaggaacccgacgacggcgaccgaagccacctgcagggcgacctccagagct 1365

                                                                        
Query: 390  ttcatggtcttcagcgccgtgctgcagctcctgcactgcgcgacgtgcgaccagtacctc 449
             ||||   |||||| || | |||||||||| ||||||||  ||| |||||||||||||||
Sbjct: 1364 ctcatccacttcagtgcagcgctgcagctcgtgcactgcatgacatgcgaccagtacctc 1305

              
Query: 450  tc 451
            ||
Sbjct: 1304 tc 1303
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>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete
              sequence
          Length = 154555

 Score =  184 bits (93), Expect = 2e-43
 Identities = 219/261 (83%)
 Strand = Plus / Plus

                                                                          
Query: 188    tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
              ||||||||| ||||||||||| |||||||| |||||| ||||||| |||||||| |||||
Sbjct: 148280 tcacttgtaagcatggacgtagtcctggaagtagaagctcttctcaatgaagctcgcgag 148339

                                                                          
Query: 248    ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
              ||||||||| ||||||||||||||||| ||    | |||| ||||||||| | | || ||
Sbjct: 148340 ccagcgggaggcggcgaagcacagcacggcggtagacacggcggcggctcgccggacaac 148399

                                                                          
Query: 308    cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
              |||||   ||||  ||||||||||||| || ||||| |||||||  || |||||||| ||
Sbjct: 148400 cgacggtgctagactccccttggcgacggcgaggaatccgacgatggcgaccgacgccac 148459

                                                                          
Query: 368    ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
              ||||||||| ||||||||||| |||||  ||||||| || | |||||||||| |||||||
Sbjct: 148460 ctgcagggcgacctccagcgccttcatcttcttcagtgcagcgctgcagctcgtgcactg 148519

                                   
Query: 428    cgcgacgtgcgaccagtacct 448
              |  ||| ||||||| ||||||
Sbjct: 148520 catgacatgcgacctgtacct 148540



 Score =  180 bits (91), Expect = 3e-42
 Identities = 202/239 (84%)
 Strand = Plus / Plus

                                                                          
Query: 210    tcctggaaatagaagttcttctcgatgaagctggcgagccagcgggacgcggcgaagcac 269
              |||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 140103 tcctcgaaatagaaggtcttctcgatgaagccggcgagccagcgggaggcggcgaagcac 140162

                                                                          
Query: 270    agcaccgccaatgtcacgacggcggctctctgcacgaccgacgtcactagtgtccccttg 329
              |||||||||   | |||||||||||||||||| ||  ||||||| || |  |||||||||
Sbjct: 140163 agcaccgccgcagccacgacggcggctctctgaacacccgacgtgaccaccgtccccttg 140222

                                                                          
Query: 330    gcgaccgcaaggaaaccgacgaccgccaccgacgcgacctgcagggcaacctccagcgct 389
               || | || ||||| |||||||| || ||||| || ||||||||||| |||||||| |||
Sbjct: 140223 ccggcggcgaggaacccgacgacggcgaccgaagccacctgcagggcgacctccagagct 140282

                                                                         
Query: 390    ttcatggtcttcagcgccgtgctgcagctcctgcactgcgcgacgtgcgaccagtacct 448
               ||||   |||||| || | |||||||||| ||||||||  ||| ||||||||||||||
Sbjct: 140283 ctcatccacttcagtgcagcgctgcagctcgtgcactgcatgacatgcgaccagtacct 140341



 Score =  107 bits (54), Expect = 3e-20
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                          
Query: 198    gcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgagccagcgggac 257
              |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| 
Sbjct: 114588 gcatggacataatcctggaaatagaaggtcttctcgatgaagttggcgagccagcgggag 114647

                        
Query: 258    gcggcgaagc 267
              ||||||||||
Sbjct: 114648 gcggcgaagc 114657
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>ref|XM_470013.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1584

 Score =  159 bits (80), Expect = 1e-35
 Identities = 240/291 (82%), Gaps = 3/291 (1%)
 Strand = Plus / Minus

                                                                        
Query: 188  tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
            ||||||||| |||||||| || |||||||| |||||| | |||||||||||| |||||||
Sbjct: 1584 tcacttgtaagcatggacatagtcctggaagtagaagcttttctcgatgaagttggcgag 1525

                                                                        
Query: 248  ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
            ||||||||| || |||||||||||| | |||   | |||||||||||||||||| ||  |
Sbjct: 1524 ccagcgggaggcagcgaagcacagcgcggccgcagccacgacggcggctctctgaaccgc 1465

                                                                        
Query: 308  cgacgtcacta--gt-gtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgc 364
            |||||| || |  || ||||||||| || | || ||||| |||||||| || ||||||||
Sbjct: 1464 cgacgtgaccaccgtcgtccccttgccggcggcgaggaacccgacgacggcgaccgacgc 1405

                                                                        
Query: 365  gacctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgca 424
             |||||||| || ||||||| |||  ||||   |||||| || | |||||||||  ||||
Sbjct: 1404 cacctgcagtgcgacctccatcgccctcatccacttcagtgcagcgctgcagctggtgca 1345

                                                               
Query: 425  ctgcgcgacgtgcgaccagtacctctccatgagcttgtctttggttggagt 475
            ||||  ||| || ||||||||||||||||||||||  |||||||| |||||
Sbjct: 1344 ctgcatgacatgtgaccagtacctctccatgagctgatctttggtaggagt 1294
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>gb|AY109924.1| Zea mays CL64795_1 mRNA sequence
          Length = 748

 Score =  159 bits (80), Expect = 1e-35
 Identities = 231/282 (81%)
 Strand = Plus / Minus

                                                                       
Query: 188 tcacttgtaggcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgag 247
           |||||||||||| |||| |||  | || || |||||| || ||| ||||||| |||| ||
Sbjct: 540 tcacttgtaggcgtggatgtagncttgaaagtagaagntcatctggatgaagttggcaag 481

                                                                       
Query: 248 ccagcgggacgcggcgaagcacagcaccgccaatgtcacgacggcggctctctgcacgac 307
           ||| ||||| || |||||||||||||| |||   | |||||| ||||| ||||| ||   
Sbjct: 480 ccaacgggaggcagcgaagcacagcacggccgccgacacgactgcggccctctgaacagt 421

                                                                       
Query: 308 cgacgtcactagtgtccccttggcgaccgcaaggaaaccgacgaccgccaccgacgcgac 367
            ||||| |  |  || ||||| ||||| |||||||| |||||||| || ||||| || ||
Sbjct: 420 tgacgtgaggaccgttcccttagcgacggcaaggaacccgacgacggcgaccgaggccac 361

                                                                       
Query: 368 ctgcagggcaacctccagcgctttcatggtcttcagcgccgtgctgcagctcctgcactg 427
           |||||||||| |||| ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct: 360 ctgcagggcagcctcgagcgccttcatggtcttgagcgccgcgttgcagctcctgcactg 301

                                                     
Query: 428 cgcgacgtgcgaccagtacctctccatgagcttgtctttggt 469
           | | ||||||||||| |||||||||||||||| ||| |||||
Sbjct: 300 caccacgtgcgaccaatacctctccatgagctggtccttggt 259
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>ref|XM_470021.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1536

 Score =  107 bits (54), Expect = 3e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                        
Query: 198  gcatggacgtaatcctggaaatagaagttcttctcgatgaagctggcgagccagcgggac 257
            |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| 
Sbjct: 1246 gcatggacataatcctggaaatagaaggtcttctcgatgaagttggcgagccagcgggag 1187

                      
Query: 258  gcggcgaagc 267
            ||||||||||
Sbjct: 1186 gcggcgaagc 1177
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>ref|XM_960207.1| Neurospora crassa OR74A hypothetical protein (NCU03200.1) partial
            mRNA
          Length = 2736

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 221  gaagttcttctcgatgaagctgg 243
            |||||||||||||||||||||||
Sbjct: 2029 gaagttcttctcgatgaagctgg 2051
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>ref|XM_330635.1| Neurospora crassa OR74A hypothetical protein (NCU03200.1) partial
            mRNA
          Length = 2736

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 221  gaagttcttctcgatgaagctgg 243
            |||||||||||||||||||||||
Sbjct: 2029 gaagttcttctcgatgaagctgg 2051
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>emb|BX950251.1| Gallus gallus finished cDNA, clone ChEST706m10
          Length = 1244

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 405 gccgtgctgcagctcctgcactgcgc 430
           |||||||||||||||| |||||||||
Sbjct: 77  gccgtgctgcagctccagcactgcgc 102
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>gb|AY023913.1| Oryza sativa microsatellite MRG6238 containing (ATAG)X20, closest
           to marker R707, genomic sequence
          Length = 280

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 188 tcacttgtaggcatggacgtaatcctgga 216
           ||||||||| ||||||||||| |||||||
Sbjct: 252 tcacttgtaagcatggacgtagtcctgga 280
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>gb|AY023910.1| Oryza sativa microsatellite MRG6235 containing (ATAG)X17, closest
           to marker R707, genomic sequence
          Length = 268

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 188 tcacttgtaggcatggacgtaatcctgga 216
           ||||||||| ||||||||||| |||||||
Sbjct: 240 tcacttgtaagcatggacgtagtcctgga 268
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>gb|AC007865.8| Trypanosoma brucei chromosome 2 clone RPCI93-30M24, complete sequence
          Length = 148533

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 423   cactgcgcgacgtgcgaccag 443
             |||||||||||||||||||||
Sbjct: 31132 cactgcgcgacgtgcgaccag 31152
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>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 423    cactgcgcgacgtgcgaccag 443
              |||||||||||||||||||||
Sbjct: 880110 cactgcgcgacgtgcgaccag 880090
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>ref|XM_946581.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.2.4980)
           partial mRNA
          Length = 840

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 423 cactgcgcgacgtgcgaccag 443
           |||||||||||||||||||||
Sbjct: 278 cactgcgcgacgtgcgaccag 298
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 398     cttcagcgccgtgctgcagct 418
               |||||||||||||||||||||
Sbjct: 1957778 cttcagcgccgtgctgcagct 1957798
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>gb|AC132336.3| Mus musculus BAC clone RP24-230N9 from chromosome 12, complete sequence
          Length = 149020

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    ctggtttgaatgaaaatcgga 32
             |||||||||||||||||||||
Sbjct: 47371 ctggtttgaatgaaaatcgga 47351
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 231     tcgatgaagctggcgagccag 251
               |||||||||||||||||||||
Sbjct: 1293006 tcgatgaagctggcgagccag 1293026
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>gb|AC105934.3| Homo sapiens chromosome 3 clone RP11-620K19, complete sequence
          Length = 217029

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 43     gtttgaaaagagaaaaaagactagt 67
              |||||||||||||||||||| ||||
Sbjct: 202554 gtttgaaaagagaaaaaagaatagt 202530
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>gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, complete sequence
          Length = 186734

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 43     gtttgaaaagagaaaaaagactagt 67
              |||||||||||||||||||| ||||
Sbjct: 113774 gtttgaaaagagaaaaaagaatagt 113750
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 366    acctgcagggcaacctccagc 386
              |||||||||||||||||||||
Sbjct: 560925 acctgcagggcaacctccagc 560905
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>emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chromosome 12, complete
            sequence
          Length = 215752

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 12   ctggtttgaatgaaaatcgga 32
            |||||||||||||||||||||
Sbjct: 6599 ctggtttgaatgaaaatcgga 6619
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>ref|NM_116749.2| Arabidopsis thaliana DNA binding / transcription factor AT4G05100
           mRNA, complete cds
          Length = 1175

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  ggttttggtttgaaaagaga 55
           ||||||||||||||||||||
Sbjct: 677 ggttttggtttgaaaagaga 658
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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 114     catgtacactttctaaagct 133
               ||||||||||||||||||||
Sbjct: 1594497 catgtacactttctaaagct 1594516
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>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    ctccatgagcttgtctttggttgg 472
              |||||||||||| |||||||||||
Sbjct: 217634 ctccatgagcttttctttggttgg 217611
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>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    ctccatgagcttgtctttggttgg 472
              |||||||||||| |||||||||||
Sbjct: 249661 ctccatgagcttttctttggttgg 249638
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>gb|AE006492.1| Streptococcus pyogenes M1 GAS, section 21 of 167 of the complete
           genome
          Length = 10643

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 449 ctccatgagcttgtctttggttgg 472
           |||||||||||| |||||||||||
Sbjct: 262 ctccatgagcttttctttggttgg 239
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>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    ctccatgagcttgtctttggttgg 472
              |||||||||||| |||||||||||
Sbjct: 217460 ctccatgagcttttctttggttgg 217437
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>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    ctccatgagcttgtctttggttgg 472
              |||||||||||| |||||||||||
Sbjct: 225193 ctccatgagcttttctttggttgg 225170
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>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    ctccatgagcttgtctttggttgg 472
              |||||||||||| |||||||||||
Sbjct: 221849 ctccatgagcttttctttggttgg 221826
to top
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    ctccatgagcttgtctttggttgg 472
              |||||||||||| |||||||||||
Sbjct: 224244 ctccatgagcttttctttggttgg 224221
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>gb|AC121286.7| Mus musculus chromosome 12, clone RP23-36H21, complete sequence
          Length = 227648

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   tgtgcttcatgtacactttc 126
             ||||||||||||||||||||
Sbjct: 66340 tgtgcttcatgtacactttc 66321
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>gb|AY519603.1| Arabidopsis thaliana MYB transcription factor (At4g05100) mRNA,
           complete cds
          Length = 975

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  ggttttggtttgaaaagaga 55
           ||||||||||||||||||||
Sbjct: 574 ggttttggtttgaaaagaga 555
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>gb|AC132616.2| Mus musculus BAC clone RP23-317F10 from chromosome 14, complete sequence
          Length = 213684

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ctggaaatagaagttcttct 231
              ||||||||||||||||||||
Sbjct: 190976 ctggaaatagaagttcttct 190957
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>gb|AC121782.3| Mus musculus BAC clone RP23-367M7 from chromosome 3, complete sequence
          Length = 165328

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    gaggttttggtttgaaaaga 53
             ||||||||||||||||||||
Sbjct: 94727 gaggttttggtttgaaaaga 94708
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>gb|AC122212.2| Mus musculus BAC clone RP23-99K17 from 10, complete sequence
          Length = 198928

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 30     ggaagaggttttggtttgaa 49
              ||||||||||||||||||||
Sbjct: 179380 ggaagaggttttggtttgaa 179399
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>gb|AC087903.26| Mus musculus strain C57BL/6J clone rp23-4p7 map 3, complete sequence
          Length = 183094

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     gaggttttggtttgaaaaga 53
              ||||||||||||||||||||
Sbjct: 170932 gaggttttggtttgaaaaga 170951
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>gb|AC087062.25| Mus musculus strain C57BL/6J clone rp23-15p14 map 3, complete sequence
          Length = 224451

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    gaggttttggtttgaaaaga 53
             ||||||||||||||||||||
Sbjct: 10790 gaggttttggtttgaaaaga 10809
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>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    ctccatgagcttgtctttggttgg 472
              |||||||||||| |||||||||||
Sbjct: 221157 ctccatgagcttttctttggttgg 221134
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>gb|DQ366728.1| Uncultured Prochlorococcus marinus clone HF10-88H10 genomic sequence
          Length = 42262

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   catgtacactttctaaagct 133
             ||||||||||||||||||||
Sbjct: 16869 catgtacactttctaaagct 16850
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>emb|AL356784.12| Human DNA sequence from clone RP5-1108C9 on chromosome 10, complete
            sequence
          Length = 15479

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   tttgaaaagagaaaaaagac 63
            ||||||||||||||||||||
Sbjct: 8095 tttgaaaagagaaaaaagac 8114
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>emb|X05630.1|RCPETG Rhodopseudomonas capsulata petABC operon
          Length = 4007

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  gcgaccgcaaggaaaccgac 349
            ||||||||||||||||||||
Sbjct: 2952 gcgaccgcaaggaaaccgac 2971
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>gb|AC157546.7| Mus musculus chromosome 19, clone RP23-325I11, complete sequence
          Length = 173513

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 462   tctttggttggagtctctgg 481
             ||||||||||||||||||||
Sbjct: 23547 tctttggttggagtctctgg 23566
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>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14
          Length = 198563

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     ggttttggtttgaaaagaga 55
              ||||||||||||||||||||
Sbjct: 151405 ggttttggtttgaaaagaga 151386
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>emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, complete genome; segment 1/4
          Length = 282610

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 52    gagaaaaaagactagttgctttat 75
             |||||||||||| |||||||||||
Sbjct: 67452 gagaaaaaagacgagttgctttat 67475
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>gb|AE009971.1| Streptococcus pyogenes strain MGAS8232, section 19 of 173 of the
            complete genome
          Length = 10826

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 449  ctccatgagcttgtctttggttgg 472
            |||||||||||| |||||||||||
Sbjct: 8707 ctccatgagcttttctttggttgg 8684
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>dbj|AB169155.1| Macaca fascicularis testis cDNA, clone: QtsA-17630, similar to human
            KIAA1201 protein (KIAA1201), mRNA, RefSeq: XM_370660.2
          Length = 2503

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 220  agaagttcttctcgatgaag 239
            ||||||||||||||||||||
Sbjct: 1753 agaagttcttctcgatgaag 1734
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>gb|AF386932.1|AF386932 Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 1148

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  ggttttggtttgaaaagaga 55
           ||||||||||||||||||||
Sbjct: 677 ggttttggtttgaaaagaga 658
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>gb|BC095599.1| Danio rerio plasticin, mRNA (cDNA clone MGC:111926 IMAGE:7430846),
           complete cds
          Length = 2135

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 cttctcgatgaagctggcga 246
           ||||||||||||||||||||
Sbjct: 352 cttctcgatgaagctggcga 333
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>gb|AC152945.1| Mus musculus 10 BAC RP23-257F18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 175982

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     tttgaaaagagaaaaaagac 63
              ||||||||||||||||||||
Sbjct: 171023 tttgaaaagagaaaaaagac 171042
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>gb|AC159473.7| Mus musculus 10 BAC RP23-215E23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190387

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 44     tttgaaaagagaaaaaagac 63
              ||||||||||||||||||||
Sbjct: 107557 tttgaaaagagaaaaaagac 107538
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>gb|AF202967.1|AF202967 Schistosoma mansoni clone 3 microsatellite sequence
          Length = 461

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  tttgaaaagagaaaaaagac 63
           ||||||||||||||||||||
Sbjct: 265 tttgaaaagagaaaaaagac 246
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>gb|AC156938.3| Mus musculus BAC clone RP23-314M12 from chromosome 14, complete
             sequence
          Length = 207534

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ctggaaatagaagttcttct 231
             ||||||||||||||||||||
Sbjct: 99187 ctggaaatagaagttcttct 99168
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>gb|AC158165.1| Mus musculus BAC clone RP23-462M21 from chromosome 6, complete sequence
          Length = 179032

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   ttgtctttggttggagtctc 478
             ||||||||||||||||||||
Sbjct: 33207 ttgtctttggttggagtctc 33188
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>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    ctccatgagcttgtctttggttgg 472
              |||||||||||| |||||||||||
Sbjct: 208713 ctccatgagcttttctttggttgg 208690
to top
>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    ctccatgagcttgtctttggttgg 472
              |||||||||||| |||||||||||
Sbjct: 202623 ctccatgagcttttctttggttgg 202600
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    gcgacctgcagggcaacctc 382
              ||||||||||||||||||||
Sbjct: 770359 gcgacctgcagggcaacctc 770340
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>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV,
              complete sequence
          Length = 183147

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     ggttttggtttgaaaagaga 55
              ||||||||||||||||||||
Sbjct: 101705 ggttttggtttgaaaagaga 101724
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>gb|AF062907.1|AF062907 Arabidopsis thaliana putative transcription factor (MYB74) mRNA,
           partial cds
          Length = 900

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  ggttttggtttgaaaagaga 55
           ||||||||||||||||||||
Sbjct: 379 ggttttggtttgaaaagaga 360
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>gb|AC122763.9| Mus musculus chromosome 19, clone RP24-68F2, complete sequence
          Length = 176325

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   tctttggttggagtctctgg 481
             ||||||||||||||||||||
Sbjct: 35916 tctttggttggagtctctgg 35897
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>gb|AC139185.5| Mus musculus BAC clone RP24-91B1 from 6, complete sequence
          Length = 191289

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 459    ttgtctttggttggagtctc 478
              ||||||||||||||||||||
Sbjct: 140390 ttgtctttggttggagtctc 140371
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>gb|BT001182.1| Arabidopsis thaliana Unknown protein (At4g05100) mRNA, complete cds
          Length = 1005

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  ggttttggtttgaaaagaga 55
           ||||||||||||||||||||
Sbjct: 574 ggttttggtttgaaaagaga 555
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>emb|AL591711.22| Mouse DNA sequence from clone RP23-19L12 on chromosome 2, complete
             sequence
          Length = 197743

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   taatcctggaaatagaagtt 226
             ||||||||||||||||||||
Sbjct: 33875 taatcctggaaatagaagtt 33856


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,369,086
Number of Sequences: 3902068
Number of extensions: 4369086
Number of successful extensions: 97092
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96651
Number of HSP's gapped (non-prelim): 437
length of query: 498
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 476
effective length of database: 17,147,199,772
effective search space: 8162067091472
effective search space used: 8162067091472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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