ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7g21 |
|---|---|
| Clone Library Name | barley_pub |
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 285 bits (728), Expect = 1e-76 Identities = 139/145 (95%), Positives = 141/145 (97%) Frame = -2 Query: 636 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQL 457 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVL FENKQL Sbjct: 227 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQL 286 Query: 456 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGADVSA 277 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEK+EG D+SA Sbjct: 287 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKAEGVDLSA 346 Query: 276 YGSSKVCTTQAPVQLGSLRAADGKE 202 YGSSKV TQAPVQLGSLRAADGKE Sbjct: 347 YGSSKVVQTQAPVQLGSLRAADGKE 371
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 274 bits (701), Expect = 1e-73 Identities = 129/145 (88%), Positives = 140/145 (96%) Frame = -2 Query: 636 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQL 457 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEI+L FE+++L Sbjct: 234 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDREL 293 Query: 456 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGADVSA 277 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTM+LKDGLR TYFWIKEQ+EKEK++G D++ Sbjct: 294 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMKLKDGLRFTYFWIKEQIEKEKTQGVDIAG 353 Query: 276 YGSSKVCTTQAPVQLGSLRAADGKE 202 YGSSKV +TQAPVQLGSLRAADGKE Sbjct: 354 YGSSKVVSTQAPVQLGSLRAADGKE 378
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 271 bits (693), Expect = 1e-72 Identities = 131/145 (90%), Positives = 138/145 (95%) Frame = -2 Query: 636 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQL 457 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE+VL FE K+L Sbjct: 233 FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKL 292 Query: 456 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEKSEGADVSA 277 PIHHIPGPEGVRGRNSDN LIKEKLGWAP MRLK+GLRITYFWIKEQ+EKEK++G+DVS Sbjct: 293 PIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSL 352 Query: 276 YGSSKVCTTQAPVQLGSLRAADGKE 202 YGSSKV TQAPVQLGSLRAADGKE Sbjct: 353 YGSSKVVGTQAPVQLGSLRAADGKE 377
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 60.5 bits (145), Expect = 4e-09 Identities = 32/110 (29%), Positives = 58/110 (52%), Gaps = 1/110 (0%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPI 451 ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ + I Sbjct: 287 VYGSGSQTRAFQYVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHI 346 Query: 450 HHIP-GPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKE 304 +P + + R D K LGW P + L++GL T + +LE + Sbjct: 347 QFLPEAQDDPQRRRPDIRKAKLLLGWEPVVPLEEGLNKTIQYFSRELEHQ 396
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) Length = 347 Score = 60.5 bits (145), Expect = 4e-09 Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 3/108 (2%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKS-DFREPVNIGSDEMVSMNEMAEIVLGFENKQ-L 457 +WG G R FT +D+ E V+ L + E VN+GS E V++ E+AE V G + + Sbjct: 233 VWGSGAAAREFTHVDDLAEAVVVLMERYSGEEHVNVGSGEEVTVRELAEAVRGVVGYEGV 292 Query: 456 PIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITY-FWIKEQ 316 PEGV R D+ ++ KLGW P + L+DG++ Y F+++ + Sbjct: 293 VAWDAARPEGVARRVVDSGRMR-KLGWEPRVALRDGIQDLYRFYLRHE 339
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 58.5 bits (140), Expect = 2e-08 Identities = 37/114 (32%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEG-VLRLTKSDFREPVNIGSDEMVSMNEMAEIV---LGFENK 463 +WG G R F +D+ + V + + E VN+GS V++ E+AE+V +GF+ K Sbjct: 217 VWGSGSPLREFLHVDDLADACVFLMDQYSGFEHVNVGSGVEVTIKELAELVKEVVGFKGK 276 Query: 462 QLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEK 301 + P+G + D++ + LGW P + LKDGL TY W E + ++K Sbjct: 277 L--VWDTTKPDGTPRKLMDSSKLAS-LGWTPKISLKDGLSQTYEWYLENVVQKK 327
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) Length = 328 Score = 58.2 bits (139), Expect = 2e-08 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 4/114 (3%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKS-DFREPVNIGSDEMVSMNEMAEIV---LGFENK 463 +WG G R F +D+ + V+ L E VN+GS V++ E+AE+V +GF+ K Sbjct: 217 VWGTGSPLREFLHVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGK 276 Query: 462 QLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKEK 301 + P+G + D++ I+E +GW P + LK+GL TY W E + K Sbjct: 277 L--VWDSSKPDGTPRKLMDSSKIQE-MGWKPKVPLKEGLVETYKWYVENVISAK 327
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPI 451 ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ I Sbjct: 289 VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEI 348 Query: 450 HHI-PGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLE 310 + + + R D K LGW P + L++GL + +++LE Sbjct: 349 QFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPI 451 ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ I Sbjct: 289 VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEI 348 Query: 450 HHI-PGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLE 310 + + + R D K LGW P + L++GL + +++LE Sbjct: 349 QFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPI 451 ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ I Sbjct: 289 VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEI 348 Query: 450 HHI-PGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLE 310 + + + R D K LGW P + L++GL + +++LE Sbjct: 349 QFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 1/108 (0%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPI 451 ++G G QTR+F ++ + V G++ L S+ PVN+G+ E ++ E A+++ I Sbjct: 289 VYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEI 348 Query: 450 HHI-PGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLE 310 + + + R D K LGW P + L++GL + +++LE Sbjct: 349 QFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELE 396
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 56.2 bits (134), Expect = 8e-08 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 4/105 (3%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEG-VLRLTKSDFREPVNIGSDEMVSMNEMAEIV---LGFENK 463 +WG G R F +D+ + V L + E VNIGS + V++ E+AE+V +GFE K Sbjct: 203 VWGTGSPLREFLHVDDLADACVFLLDRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGK 262 Query: 462 QLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFW 328 P+G + D++ + LGW P + L+DGL TY W Sbjct: 263 LG--WDCTKPDGTPRKLMDSSKLAS-LGWTPKVSLRDGLSQTYDW 304
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 54.7 bits (130), Expect = 2e-07 Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 1/110 (0%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPI 451 ++G G QTR+F ++ + V G++ L S+ PVN+G+ + S+ + A ++ I Sbjct: 290 VYGSGEQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEI 349 Query: 450 HHI-PGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLEKE 304 + + + R D K LGW P + L++GL T + +++LE + Sbjct: 350 SFLSEAQDDPQRRKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKELEHQ 399
>Y1055_METJA (Q58455) Hypothetical protein MJ1055| Length = 326 Score = 50.4 bits (119), Expect = 4e-06 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 2/107 (1%) Frame = -2 Query: 633 EMWGDGLQTRSFTFIDECVEGVLRLTKSDF-REPVNIGSDEMVSMNEMAEIVLGFENKQL 457 E++ G R FT+I + V+G+LR K DF E N+G+ + V + E++ + NK+ Sbjct: 212 EVYNYGNMERDFTYISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKA 271 Query: 456 PIHHIPGPEG-VRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKE 319 +P +G V +D + ++ LG+ P + +++GL+ W E Sbjct: 272 KKKFLPMQDGDVLRTYADLSKSEKLLGYKPKVTIEEGLKRFCNWFLE 318
>GALE_METJA (Q57664) Putative UDP-glucose 4-epimerase (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 305 Score = 47.0 bits (110), Expect = 5e-05 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 3/106 (2%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIV---LGFENKQ 460 ++GDG QTR F ++ + + L + + E VNIG+ + S+NE+ +I+ +GF + Sbjct: 199 IFGDGNQTRDFVYVGDVAKANL-MALNWKNEIVNIGTGKETSVNELFDIIKHEIGFRGEA 257 Query: 459 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIK 322 + + EG R + E LGW P + LK+G++ W+K Sbjct: 258 I---YDKPREGEVYRIYLDIKKAESLGWKPEIDLKEGIKRVVNWMK 300
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 44.7 bits (104), Expect = 2e-04 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQL- 457 ++GDGL R + +D+ V G+ + T+ NIG +S E+ ++L Sbjct: 206 LYGDGLNVREWLHVDDHVRGIEAVRTRGRAGRVYNIGGGATLSNKELVGLLLEAAGADWG 265 Query: 456 PIHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMRLKDGLRITYFW 328 + ++ +G R + D+T I+ +LG+AP + L DGL T W Sbjct: 266 SVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDLADGLAATVAW 309
>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF| Length = 314 Score = 43.5 bits (101), Expect = 5e-04 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 5/104 (4%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKS-DFREPVNIGSDEMVSMNEMAEI---VLGFENK 463 +WG G TR F + ++C + ++ L K E +NIGS +S+ E+A I V+GF+ Sbjct: 205 IWGSGTPTRDFLYSEDCSDALVFLLKHYSETEHINIGSGGEISIIELAHIVCRVVGFKGD 264 Query: 462 QLPIHHIPGPEGV-RGRNSDNTLIKEKLGWAPTMRLKDGLRITY 334 + P+G R S L+ +GW P L+ GL +Y Sbjct: 265 --IVFDTSKPDGTPRKLLSSERLV--SMGWRPKTSLELGLAKSY 304
>SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis protein spsJ| Length = 315 Score = 42.7 bits (99), Expect = 9e-04 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 2/103 (1%) Frame = -2 Query: 630 MWGDGLQTRSFTFI-DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLP 454 ++GDGLQ R + F D C L L K E NIG + E+A ++L + Sbjct: 207 LYGDGLQIRDWLFAEDHCRAIKLILEKGTDGEVYNIGGGNERTNKELASVILKHLGCEEL 266 Query: 453 IHHIPGPEGVRGRNSDN-TLIKEKLGWAPTMRLKDGLRITYFW 328 H+ +G R + N + +K +LGW + ++G+ T W Sbjct: 267 FAHVEDRKGHDRRYAINASKLKNELGWRQEVTFEEGIARTIQW 309
>RMLB_STRMU (P95780) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 348 Score = 40.0 bits (92), Expect = 0.006 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 4/123 (3%) Frame = -2 Query: 633 EMWGDGLQTRSFTFIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLG-FENKQ 460 +++G+G R + ++ GV LTK E IG+D + E+ E++L + Sbjct: 216 KLYGEGKNVRDWIHTNDHSTGVWAILTKGRIGETYLIGADGEKNNKEVLELILEKMSQPK 275 Query: 459 LPIHHIPGPEGVRGRNS-DNTLIKEKLGWAPTM-RLKDGLRITYFWIKEQLEKEKSEGAD 286 H+ G R + D+T ++E+LGW P ++GL T W E + K+E Sbjct: 276 NAYDHVTDRAGHDLRYAIDSTKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEA 335 Query: 285 VSA 277 V A Sbjct: 336 VEA 338
>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 350 Score = 39.7 bits (91), Expect = 0.008 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 8/117 (6%) Frame = -2 Query: 624 GDGLQTRSFTFIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLGF---ENKQL 457 G GLQTR+F + + VE L L K E NIG++ +S+ ++A+ ++ N + Sbjct: 224 GSGLQTRNFLYATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSES 283 Query: 456 PIHHIPGPEGVRGRNSDNTLIKEK----LGWAPTMRLKDGLRITYFWIKEQLEKEKS 298 + + R N +K + LGW P + K+G++ T W +E K+ Sbjct: 284 EMENWVDYVNDRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWKN 340
>NOLK_AZOCA (P33217) Nodulation protein nolK| Length = 312 Score = 38.9 bits (89), Expect = 0.013 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 5/104 (4%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRLTKSDFREP--VNIGSDEMVSMNEMAEIV---LGFEN 466 +WGDG R F F + + +++ + P +N+G + +S+ E +V +G+ Sbjct: 201 IWGDGTARREFMFAYDFAKIIIKALEVPELIPSSMNVGVGKDLSVLEYYSLVARVIGWSG 260 Query: 465 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITY 334 + ++ + P G+R + D T + LGW P L+ G+R TY Sbjct: 261 EF--VYDLNRPVGMRSKLMDITHLTA-LGWVPERSLEGGIRSTY 301
>TGDS_MOUSE (Q8VDR7) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 36.2 bits (82), Expect = 0.084 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%) Frame = -2 Query: 624 GDGLQTRSFTFIDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLGF---ENKQL 457 G GLQ R+F + + VE L LTK + E NIG++ +S+ ++A+ ++ N + Sbjct: 224 GSGLQRRNFLYAADVVEAFLTVLTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSES 283 Query: 456 PIHHIPGPEGVRGRNSDNTLIKEK----LGWAPTMRLKDGLRITYFWIKEQLEKEKS 298 R N +K + LGW P + ++G++ T W ++ K+ Sbjct: 284 ETESWVDYVSDRPHNDMRYPMKSEKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWKN 340
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 36.2 bits (82), Expect = 0.084 Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 13/121 (10%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEG---VLRLTKSDFREP-------VNIGSDEMVSMNEMAEI- 484 +WG G R F +D+ V+ L + E +N+G+ ++ E+A+ Sbjct: 201 VWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTI 260 Query: 483 --VLGFENKQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQLE 310 V+G++ + + P+G + D T + + LGW + L+ GL TY W E + Sbjct: 261 AKVVGYKGRV--VFDASKPDGTPRKLLDVTRLHQ-LGWYHEISLEAGLASTYQWFLENQD 317 Query: 309 K 307 + Sbjct: 318 R 318
>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)| Length = 334 Score = 35.8 bits (81), Expect = 0.11 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 24/129 (18%) Frame = -2 Query: 633 EMWGDGLQTRSFTFIDECVEGVLRL----TKSDFREPV---------------NIGSD-- 517 +++ G R FT+ID+ E ++RL +D + V NIG+ Sbjct: 206 DVYNYGKMKRDFTYIDDIAEAIIRLQDVIPHADTQWTVETGTPAASIAPYRVYNIGNSSP 265 Query: 516 -EMVSMNEMAEIVLGFENKQ--LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGL 346 E++ + E LG E K+ LP+ P V ++D + E +G+ P +KDG+ Sbjct: 266 VELMDYIQALEDALGIEAKKNMLPLQ----PGDVLETSADTKALYEVIGFTPETTVKDGV 321 Query: 345 RITYFWIKE 319 + W ++ Sbjct: 322 KNFVNWYRD 330
>RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 338 Score = 35.8 bits (81), Expect = 0.11 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 14/115 (12%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEG-VLRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLP 454 ++GDG Q R + F+++ V+ L LTK E NIG + + E+ + + + P Sbjct: 216 IYGDGQQIRDWLFVEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAP 275 Query: 453 I--HHIPGPEG----VRGR-------NSDNTLIKEKLGWAPTMRLKDGLRITYFW 328 +HI E V+ R + D + I +LGW P + + GLR T W Sbjct: 276 SKPNHIKYYEDLMTFVKDRPGHDVRYSLDCSKIHAELGWQPQITFEQGLRQTVKW 330
>RFBB_NEIMA (Q9S642) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 34.7 bits (78), Expect = 0.24 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 14/115 (12%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLP 454 ++GDG+Q R + F+++ + ++ T+ E NIG + E+ + + + P Sbjct: 216 VYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAP 275 Query: 453 ------------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMRLKDGLRITYFW 328 I + G R + D I+ LGW P + GLR T W Sbjct: 276 EKPAGVARYEDLITFVQDRPGHDARYAVDTAKIRRDLGWQPLETFESGLRKTVQW 330
>HLDD_DESVH (Q72ET7) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 323 Score = 34.7 bits (78), Expect = 0.24 Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -2 Query: 627 WGDGLQTRSFTFIDECVEGVLRLTKSDFREPV-NIGSDEMVSMNEMAEIVLGFENKQLPI 451 + DG Q R F ++ +CVE + L ++ V N+G+ + + N++ V +++ I Sbjct: 209 YADGGQMRDFIYVKDCVEVMWWLLQNPGVNGVFNVGTGKARTWNDLVTAVFRAMDREPVI 268 Query: 450 HHIPGPEGVRGR 415 +I PE +RG+ Sbjct: 269 EYIDMPEQLRGK 280
>MA1A2_HUMAN (O60476) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 33.1 bits (74), Expect = 0.71 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 2/108 (1%) Frame = -2 Query: 567 LRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIHHIPGPEGVRGRNSDNTLIKE 388 LR ++ + R + +++V ++ E NK LP IP G+RG + ++ I+E Sbjct: 126 LRKSREEIRAEIQTEKNKVVQEMKIKE------NKPLPPVPIPNLVGIRGGDPEDNDIRE 179 Query: 387 KLGWAPTM--RLKDGLRITYFWIKEQLEKEKSEGADVSAYGSSKVCTT 250 K M D R TY W +L +G + +GSS++ T Sbjct: 180 KREKIKEMMKHAWDNYR-TYGWGHNELRPIARKGHSPNIFGSSQMGAT 226
>Y2889_PHOPR (Q6LN94) UPF0247 protein PBPRA2889| Length = 156 Score = 33.1 bits (74), Expect = 0.71 Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Frame = -2 Query: 465 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 316 K +P+ I P G RG+N+D I +K G A + G RI W + +Q Sbjct: 29 KDMPLELIEIPAGKRGKNADIARILQKEGEAMLATVAKGNRIVTLDIPGKRWDTGQLAQQ 88 Query: 315 LEKEKSEGADVS 280 L+ K +G DVS Sbjct: 89 LDSWKLDGRDVS 100
>RFBB_NEIMB (P55294) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 355 Score = 32.7 bits (73), Expect = 0.93 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 14/115 (12%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLP 454 ++GDG+Q R + F+++ + ++ T+ E NIG + E+ + + + P Sbjct: 216 VYGDGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAP 275 Query: 453 ------------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMRLKDGLRITYFW 328 I + G R + D I+ LGW P + GLR T W Sbjct: 276 EKPAGVARYEDLITFVQDRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQW 330
>Y1298_PHOLL (Q7N760) UPF0247 protein plu1298| Length = 156 Score = 32.7 bits (73), Expect = 0.93 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 10/72 (13%) Frame = -2 Query: 465 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 316 K +P I P G RG+N+D I EK G + G RI W + +Q Sbjct: 29 KDMPFDLIEIPAGKRGKNADIKRILEKEGEQMLAAVSKGSRIVTLDIPGSRWETPQLAQQ 88 Query: 315 LEKEKSEGADVS 280 LE K +G DVS Sbjct: 89 LEHWKRDGRDVS 100
>RFBB_NEIGO (P37761) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 346 Score = 32.7 bits (73), Expect = 0.93 Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 14/115 (12%) Frame = -2 Query: 630 MWGDGLQTRSFTFIDECVEGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLP 454 ++GDG Q R + F+++ + ++ T+ E NIG + E+ + + + P Sbjct: 221 VYGDGAQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAP 280 Query: 453 ------------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPTMRLKDGLRITYFW 328 I + G R + D I+ LGW P + GLR T W Sbjct: 281 EKPAGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQW 335
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 32.3 bits (72), Expect = 1.2 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 21/115 (18%) Frame = -2 Query: 618 GLQTRSFTFIDECVEGVLRLTKSDFR----EPVNIGS-DEMVSMNEMAEIVL-GFENKQL 457 G Q R FT I + +E + R+ +D + +NIG+ D S+ E+A ++L F+ L Sbjct: 531 GQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPL 590 Query: 456 PIHHIP---------------GPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRIT 337 H P G + V R + LGW P++ ++D + T Sbjct: 591 RCHFPPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEET 645
>LPSL_RHIME (O54067) UDP-glucuronate 5'-epimerase (EC 5.1.3.12) (UDP-glucuronic| acid epimerase) Length = 341 Score = 32.0 bits (71), Expect = 1.6 Identities = 11/26 (42%), Positives = 21/26 (80%) Frame = -2 Query: 633 EMWGDGLQTRSFTFIDECVEGVLRLT 556 +++G+G +R FT+ID+ VE ++RL+ Sbjct: 207 DIYGEGRMSRDFTYIDDLVESIVRLS 232
>Y041_HAEI8 (Q4QPL1) UPF0247 protein NTHI0041| Length = 155 Score = 31.6 bits (70), Expect = 2.1 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 15/83 (18%) Frame = -2 Query: 486 IVLGFEN------KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF-- 331 + GFE K +P I P G RG+N+D I E+ G A G +T Sbjct: 16 VTTGFEEYQRRFPKDMPFELIEIPAGKRGKNADIKRILEQEGKAMLAACGKGKVVTLDIP 75 Query: 330 ---W----IKEQLEKEKSEGADV 283 W + EQLE K++G DV Sbjct: 76 GKPWTTPQLAEQLEAWKNDGCDV 98
>Y1304_ERWCT (Q6D7M1) UPF0247 protein ECA1304| Length = 156 Score = 31.6 bits (70), Expect = 2.1 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 10/72 (13%) Frame = -2 Query: 465 KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQ 316 K +P + P G RG+N+D I E+ G + G RI W + +Q Sbjct: 29 KDMPFELLEIPAGKRGKNADIKRILEREGEQMLAAVGKGNRIVTLDIPGTRWETPHLAQQ 88 Query: 315 LEKEKSEGADVS 280 LE+ K +G DVS Sbjct: 89 LERWKQDGRDVS 100
>Y033_HAEIN (P44470) UPF0247 protein HI0033| Length = 155 Score = 31.2 bits (69), Expect = 2.7 Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 15/83 (18%) Frame = -2 Query: 486 IVLGFEN------KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF-- 331 + GFE K +P I P G RG+N+D I E+ G A G +T Sbjct: 16 VTTGFEEYQRRFPKDMPFELIEIPAGKRGKNADIKRILEQEGKAMLAACGKGKVVTLDIP 75 Query: 330 ---W----IKEQLEKEKSEGADV 283 W + EQLE K++G DV Sbjct: 76 GKPWTTPQLAEQLEAWKNDGRDV 98
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 30.8 bits (68), Expect = 3.5 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 5/110 (4%) Frame = -2 Query: 624 GDGLQTRSFTFIDECVEGV-LRLTKSDFREPVNIGSDEMVSMNEMAEIVLGFENKQLPIH 448 GDG RS+ + ++ E + L K + NIG+ + +N++A+ + N P Sbjct: 217 GDGSNVRSYLYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVNDVAKDICKLFNMD-PEA 275 Query: 447 HIPGPEGVRGRNSDNTLIKE----KLGWAPTMRLKDGLRITYFWIKEQLE 310 +I + R N + + KLGW+ ++GL+ T W + E Sbjct: 276 NIKFVDN-RPFNDQRYFLDDQKLKKLGWSERTTWEEGLKKTMDWYTQNPE 324
>SO1C1_HUMAN (Q9NYB5) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Organic anion transporter F) (OATP-F) (Organic anion-transporting polypeptide 14) (Organic anion transporter polypeptide-related protein Length = 712 Score = 30.8 bits (68), Expect = 3.5 Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 13/119 (10%) Frame = +2 Query: 242 GACVVQTLDDPYXXXXXXXXXXXXXXXLIQKYVILSPSFSLMVGAQPSFSLMSV------ 403 G +Q L Y +Q I+ P F ++G+ + + + Sbjct: 200 GETPIQPLGIAYLDDFASEDNAAFYIGCVQTVAIIGPIFGFLLGSLCAKLYVDIGFVNLD 259 Query: 404 LSELRPRTPSGPGMWWMGSCLFSKPRTISAISFMLTISSLPMF-------TGSRKSDFV 559 + P+ P G WW+G + ++A+ F SLP + S KS F+ Sbjct: 260 HITITPKDPQWVGAWWLGYLIAGIISLLAAVPFWYLPKSLPRSQSREDSNSSSEKSKFI 318
>ESR1_ICTPU (Q9YHZ7) Estrogen receptor (ER) (Estradiol receptor) (ER-alpha)| Length = 617 Score = 30.0 bits (66), Expect = 6.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 479 WASRTSSCPSTTSLAPRASVAVTLTT 402 WA R SS P+TT+ P + T TT Sbjct: 564 WADRVSSSPTTTATTPTTNTTTTTTT 589
>SO1C1_RAT (Q9EPZ7) Solute carrier organic anion transporter family member 1C1| (Solute carrier family 21 member 14) (Blood-brain barrier-specific anion transporter 1) (BBB-specific anion transporter type 1) Length = 716 Score = 30.0 bits (66), Expect = 6.0 Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 13/120 (10%) Frame = +2 Query: 242 GACVVQTLDDPYXXXXXXXXXXXXXXXLIQKYVILSPSFSLMVGAQPSFSLMSV------ 403 G +Q L Y +Q I+ P F ++G+ + + + Sbjct: 203 GETPIQPLGIAYLDDFASEDNAAFYIGCVQTVAIIGPIFGFLLGSLCAKLYVDIGFVNLD 262 Query: 404 LSELRPRTPSGPGMWWMGSCLFSKPRTISAISFMLTISSLPMF-------TGSRKSDFVS 562 + P+ P G WW+G + ++A+ F +LP + S KS F++ Sbjct: 263 HITITPKDPQWVGAWWLGYLIAGFLSLLAAVPFWCLPKTLPRSQSREDSGSSSEKSKFIT 322
>CASP2_HUMAN (P42575) Caspase-2 precursor (EC 3.4.22.-) (CASP-2) (ICH-1| protease) (ICH-1L/1S) [Contains: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12] Length = 452 Score = 30.0 bits (66), Expect = 6.0 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 310 LQLLLDPKIRDPQPILQPHGWSPAKLLLDECVVRVTATDALGARDVVDGQLLVLE 474 + +L D ++ Q LQ PA + D C+V + + GA VDG+LL L+ Sbjct: 240 VHVLCDQTAQEMQEKLQNFAQLPAHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQ 294
>MA1A2_MOUSE (P39098) Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB (EC| 3.2.1.113) (Processing alpha-1,2-mannosidase IB) (Alpha-1,2-mannosidase IB) (Mannosidase alpha class 1A member 2) Length = 641 Score = 29.6 bits (65), Expect = 7.9 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Frame = -2 Query: 528 IGSDEMVSMNEMAEIVLGFENKQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLK-- 355 I ++ N++A+ + E + LP +P GV G + ++ IK+K M Sbjct: 133 IRAEIQTEKNKVAQAMKTKETRVLPPVPVPQRVGVSGGDPEDMEIKKKRDKIKEMMKHAW 192 Query: 354 DGLRITYFWIKEQLEKEKSEGADVSAYGSSKVCTT 250 D R TY W +L +G + +GSS++ T Sbjct: 193 DNYR-TYGWGHNELRPIARKGHSTNIFGSSQMGAT 226
>Y1923_PASMU (Q9CJR9) UPF0247 protein PM1923| Length = 155 Score = 29.6 bits (65), Expect = 7.9 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 15/84 (17%) Frame = -2 Query: 486 IVLGFEN------KQLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF-- 331 + +GFE K++P I P G RG+N+D I E+ G A +T Sbjct: 16 VTMGFEEYQRRFPKEMPFELIEIPAGKRGKNADIKRILEQEGKAMLAACGKSRIVTLDIP 75 Query: 330 ---WIKE----QLEKEKSEGADVS 280 W E QLE K++G D+S Sbjct: 76 GKPWTTEQLATQLEVWKNDGRDLS 99
>Y723_VIBPA (Q87RQ4) UPF0247 protein VP0723| Length = 156 Score = 29.6 bits (65), Expect = 7.9 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 10/70 (14%) Frame = -2 Query: 459 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPTMRLKDGLRITYF------W----IKEQLE 310 +P+ + G RG+N+D I +K G A + G RI W + EQLE Sbjct: 31 MPLELVEISAGKRGKNADIARILQKEGEAMLAAVPKGNRIVTLDIPGKKWDTPQLAEQLE 90 Query: 309 KEKSEGADVS 280 K +G DVS Sbjct: 91 AWKLDGRDVS 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,837,444 Number of Sequences: 219361 Number of extensions: 1913559 Number of successful extensions: 5461 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 5250 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5442 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
