ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbaal7g21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK102348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C16, full insert sequence Length = 1533 Score = 482 bits (243), Expect = e-133 Identities = 392/439 (89%), Gaps = 2/439 (0%) Strand = Plus / Minus Query: 199 tcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgca 258 ||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || |||| Sbjct: 1191 tcactcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtc-tgca 1133 Query: 259 g-accttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagct 317 ||||||||||| ||||| ||||||| ||| |||| |||| || |||||||| |||| Sbjct: 1132 ctaccttggatgacccgtaggccgacaagtcgacgccctcggccttctccttctcgagct 1073 Query: 318 gctccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagccc 377 ||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1072 gctccttgatccagaagtatgtgatcctcagaccatccttcagcctcatggttggagccc 1013 Query: 378 agccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggc 437 ||||||||||||| |||||||| |||||||| ||||| || |||||||| ||||| || | Sbjct: 1012 agccaagcttctctttgatgagcgtgttgtcggagttgcgaccacggacaccctctggcc 953 Query: 438 cagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagccatct 497 | |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 952 cggggatgtggtggatgggcagctgcttgttctcaaagctgaggactatctcagccatct 893 Query: 498 cgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttg 557 | |||||||| |||||||||||||| || |||||||||||||| |||||||| ||||||| Sbjct: 892 cattcatgctgaccatttcatcacttccaatgtttacaggctcacggaaatcggactttg 833 Query: 558 tgagcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagac 617 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 832 tcaacctgaggacaccctccacacattcatcaataaacgtgaaggatctagtctgaagac 773 Query: 618 catctccccacatctcaaa 636 ||||||||||||||||||| Sbjct: 772 catctccccacatctcaaa 754
>gb|AY106775.1| Zea mays PCO117540 mRNA sequence Length = 541 Score = 311 bits (157), Expect = 2e-81 Identities = 282/321 (87%), Gaps = 2/321 (0%) Strand = Plus / Minus Query: 197 gttcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtg 256 ||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| || || Sbjct: 321 gttcactccttgccatcagcggcgcggagggagccgagctgaaccggggcctgtgtc-tg 263 Query: 257 ca-gaccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccag 315 || |||||||||||||||||| |||||| || ||| |||| || |||||||| || Sbjct: 262 cacgaccttggatgatccgtagaccgacagatccatgccctcggccttctccttctcaag 203 Query: 316 ctgctccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagc 375 ||||||||||||||| | ||||||||||||||||| |||||||||||||| || ||||| Sbjct: 202 ctgctccttgatccaggagtacgtgatcctcagcccgtccttcagcctcatagtcggagc 143 Query: 376 ccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggg 435 |||||||||||||||||||||||| |||||||| ||||| || ||||| |||||||| || Sbjct: 142 ccagccaagcttctccttgatgagcgtgttgtctgagttgcgcccacgcacgccctccgg 83 Query: 436 gccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagccat 495 || |||||||||||||||||||||||||||||||| |||| |||||| || || ||||| Sbjct: 82 cccggggatgtggtggatgggcagctgcttgttctcaaagctcaggaccatttccgccat 23 Query: 496 ctcgttcatgctcaccatttc 516 ||||||||||||||||||||| Sbjct: 22 ctcgttcatgctcaccatttc 2
>ref|NM_196510.1| Oryza sativa (japonica cultivar-group) putative epimerase/dehydratase (OSJNBa0061K21.15), mRNA Length = 1137 Score = 280 bits (141), Expect = 5e-72 Identities = 363/437 (83%) Strand = Plus / Minus Query: 201 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 260 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 1135 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 1076 Query: 261 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 320 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 1075 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 1016 Query: 321 ccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagc 380 |||||||||| || || |||| ||||||||| ||||| ||| |||| || || ||||||| Sbjct: 1015 ccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgcccagc 956 Query: 381 caagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccag 440 ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 955 caagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccag 896 Query: 441 ggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagccatctcgt 500 ||||||||||||||||||||| | | | |||||||| || | || ||||||||||||| Sbjct: 895 ggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgt 836 Query: 501 tcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttgtga 560 ||||||| ||||||||||| || || ||||| || ||||| ||||| || |||||||| | Sbjct: 835 tcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttgtca 776 Query: 561 gcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccat 620 ||| || |||||||| ||||| ||||| || ||||||||||| | ||||| || |||| Sbjct: 775 acctcagaacaccctcaacacactcatctatgaatgtgaaggaccgggtctggaggccat 716 Query: 621 ctccccacatctcaaac 637 | ||||||||||||||| Sbjct: 715 caccccacatctcaaac 699
>dbj|AB193582.1| Oryza sativa (japonica cultivar-group) OsGME-1 mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1212 Score = 280 bits (141), Expect = 5e-72 Identities = 363/437 (83%) Strand = Plus / Minus Query: 201 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 260 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 1171 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 1112 Query: 261 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 320 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 1111 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 1052 Query: 321 ccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagc 380 |||||||||| || || |||| ||||||||| ||||| ||| |||| || || ||||||| Sbjct: 1051 ccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgcccagc 992 Query: 381 caagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccag 440 ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 991 caagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccag 932 Query: 441 ggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagccatctcgt 500 ||||||||||||||||||||| | | | |||||||| || | || ||||||||||||| Sbjct: 931 ggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgt 872 Query: 501 tcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttgtga 560 ||||||| ||||||||||| || || ||||| || ||||| ||||| || |||||||| | Sbjct: 871 tcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttgtca 812 Query: 561 gcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccat 620 ||| || |||||||| ||||| ||||| || ||||||||||| | ||||| || |||| Sbjct: 811 acctcagaacaccctcaacacactcatctatgaatgtgaaggaccgggtctggaggccat 752 Query: 621 ctccccacatctcaaac 637 | ||||||||||||||| Sbjct: 751 caccccacatctcaaac 735
>dbj|AK104822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B04, full insert sequence Length = 1587 Score = 280 bits (141), Expect = 5e-72 Identities = 363/437 (83%) Strand = Plus / Minus Query: 201 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 260 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 1256 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 1197 Query: 261 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 320 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 1196 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 1137 Query: 321 ccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagc 380 |||||||||| || || |||| ||||||||| ||||| ||| |||| || || ||||||| Sbjct: 1136 ccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgcccagc 1077 Query: 381 caagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccag 440 ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 1076 caagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccag 1017 Query: 441 ggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagccatctcgt 500 ||||||||||||||||||||| | | | |||||||| || | || ||||||||||||| Sbjct: 1016 ggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgt 957 Query: 501 tcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttgtga 560 ||||||| ||||||||||| || || ||||| || ||||| ||||| || |||||||| | Sbjct: 956 tcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttgtca 897 Query: 561 gcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccat 620 ||| || |||||||| ||||| ||||| || ||||||||||| | ||||| || |||| Sbjct: 896 acctcagaacaccctcaacacactcatctatgaatgtgaaggaccgggtctggaggccat 837 Query: 621 ctccccacatctcaaac 637 | ||||||||||||||| Sbjct: 836 caccccacatctcaaac 820
>dbj|AK069385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012D14, full insert sequence Length = 1592 Score = 280 bits (141), Expect = 5e-72 Identities = 363/437 (83%) Strand = Plus / Minus Query: 201 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 260 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 1261 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 1202 Query: 261 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 320 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 1201 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 1142 Query: 321 ccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagc 380 |||||||||| || || |||| ||||||||| ||||| ||| |||| || || ||||||| Sbjct: 1141 ccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgcccagc 1082 Query: 381 caagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccag 440 ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| |||| Sbjct: 1081 caagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccag 1022 Query: 441 ggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagccatctcgt 500 ||||||||||||||||||||| | | | |||||||| || | || ||||||||||||| Sbjct: 1021 ggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgt 962 Query: 501 tcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttgtga 560 ||||||| ||||||||||| || || ||||| || ||||| ||||| || |||||||| | Sbjct: 961 tcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttgtca 902 Query: 561 gcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccat 620 ||| || |||||||| ||||| ||||| || ||||||||||| | ||||| || |||| Sbjct: 901 acctcagaacaccctcaacacactcatctatgaatgtgaaggaccgggtctggaggccat 842 Query: 621 ctccccacatctcaaac 637 | ||||||||||||||| Sbjct: 841 caccccacatctcaaac 825
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 264 bits (133), Expect = 3e-67 Identities = 187/205 (91%) Strand = Plus / Plus Query: 354 ccttcagcctcatggttggagcccagccaagcttctccttgatgagtgtgttgtcagagt 413 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 130017 ccttcagcctcatggttggagcccagccaagcttctctttgatgagcgtgttgtcggagt 130076 Query: 414 tacggccacggacgccctcggggccagggatgtggtggatgggcagctgcttgttctcga 473 | || |||||||| ||||| || || |||||||||||||||||||||||||||||||| | Sbjct: 130077 tgcgaccacggacaccctctggcccggggatgtggtggatgggcagctgcttgttctcaa 130136 Query: 474 agcccaggactatctcagccatctcgttcatgctcaccatttcatcactcccgatgttta 533 ||| |||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 130137 agctgaggactatctcagccatctcattcatgctgaccatttcatcacttccaatgttta 130196 Query: 534 caggctcgcggaaatcagactttgt 558 ||||||| |||||||| |||||||| Sbjct: 130197 caggctcacggaaatcggactttgt 130221 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Plus Query: 562 cctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatc 621 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 131083 cctgaggacaccctccacacattcatcaataaacgtgaaggatctagtctgaagaccatc 131142 Query: 622 tccccacatctcaaa 636 ||||||||||||||| Sbjct: 131143 tccccacatctcaaa 131157 Score = 101 bits (51), Expect = 3e-18 Identities = 134/159 (84%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 199 tcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgca 258 ||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || |||| Sbjct: 129759 tcactcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtc-tgca 129817 Query: 259 g-accttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagct 317 ||||||||||| ||||| ||||||| ||| |||| |||| || |||||||| |||| Sbjct: 129818 ctaccttggatgacccgtaggccgacaagtcgacgccctcggccttctccttctcgagct 129877 Query: 318 gctccttgatccaaaaatacgtgatcctcagcccatcct 356 ||||||||||||| || || ||||||||||| ||||||| Sbjct: 129878 gctccttgatccagaagtatgtgatcctcagaccatcct 129916 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 449 tggatgggcagctgcttgttctcgaagc 476 ||||| ||||||||||||||||| |||| Sbjct: 11890 tggataggcagctgcttgttctctaagc 11917
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 264 bits (133), Expect = 3e-67 Identities = 187/205 (91%) Strand = Plus / Plus Query: 354 ccttcagcctcatggttggagcccagccaagcttctccttgatgagtgtgttgtcagagt 413 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 21606498 ccttcagcctcatggttggagcccagccaagcttctctttgatgagcgtgttgtcggagt 21606557 Query: 414 tacggccacggacgccctcggggccagggatgtggtggatgggcagctgcttgttctcga 473 | || |||||||| ||||| || || |||||||||||||||||||||||||||||||| | Sbjct: 21606558 tgcgaccacggacaccctctggcccggggatgtggtggatgggcagctgcttgttctcaa 21606617 Query: 474 agcccaggactatctcagccatctcgttcatgctcaccatttcatcactcccgatgttta 533 ||| |||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 21606618 agctgaggactatctcagccatctcattcatgctgaccatttcatcacttccaatgttta 21606677 Query: 534 caggctcgcggaaatcagactttgt 558 ||||||| |||||||| |||||||| Sbjct: 21606678 caggctcacggaaatcggactttgt 21606702 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Plus Query: 562 cctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatc 621 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 21607564 cctgaggacaccctccacacattcatcaataaacgtgaaggatctagtctgaagaccatc 21607623 Query: 622 tccccacatctcaaa 636 ||||||||||||||| Sbjct: 21607624 tccccacatctcaaa 21607638 Score = 101 bits (51), Expect = 3e-18 Identities = 134/159 (84%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 199 tcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgca 258 ||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || |||| Sbjct: 21606240 tcactcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtc-tgca 21606298 Query: 259 g-accttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagct 317 ||||||||||| ||||| ||||||| ||| |||| |||| || |||||||| |||| Sbjct: 21606299 ctaccttggatgacccgtaggccgacaagtcgacgccctcggccttctccttctcgagct 21606358 Query: 318 gctccttgatccaaaaatacgtgatcctcagcccatcct 356 ||||||||||||| || || ||||||||||| ||||||| Sbjct: 21606359 gctccttgatccagaagtatgtgatcctcagaccatcct 21606397 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 449 tggatgggcagctgcttgttctcgaagc 476 ||||| ||||||||||||||||| |||| Sbjct: 21488371 tggataggcagctgcttgttctctaagc 21488398
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 264 bits (133), Expect = 3e-67 Identities = 187/205 (91%) Strand = Plus / Plus Query: 354 ccttcagcctcatggttggagcccagccaagcttctccttgatgagtgtgttgtcagagt 413 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 21916697 ccttcagcctcatggttggagcccagccaagcttctctttgatgagcgtgttgtcggagt 21916756 Query: 414 tacggccacggacgccctcggggccagggatgtggtggatgggcagctgcttgttctcga 473 | || |||||||| ||||| || || |||||||||||||||||||||||||||||||| | Sbjct: 21916757 tgcgaccacggacaccctctggcccggggatgtggtggatgggcagctgcttgttctcaa 21916816 Query: 474 agcccaggactatctcagccatctcgttcatgctcaccatttcatcactcccgatgttta 533 ||| |||||||||||||||||||| |||||||| |||||||||||||| || ||||||| Sbjct: 21916817 agctgaggactatctcagccatctcattcatgctgaccatttcatcacttccaatgttta 21916876 Query: 534 caggctcgcggaaatcagactttgt 558 ||||||| |||||||| |||||||| Sbjct: 21916877 caggctcacggaaatcggactttgt 21916901 Score = 133 bits (67), Expect = 8e-28 Identities = 73/75 (97%) Strand = Plus / Plus Query: 562 cctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatc 621 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 21917763 cctgaggacaccctccacacattcatcaataaacgtgaaggatctagtctgaagaccatc 21917822 Query: 622 tccccacatctcaaa 636 ||||||||||||||| Sbjct: 21917823 tccccacatctcaaa 21917837 Score = 101 bits (51), Expect = 3e-18 Identities = 134/159 (84%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 199 tcactccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgca 258 ||||||||| ||||| || || ||||||||||||||||| ||||| ||||| || |||| Sbjct: 21916439 tcactcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtc-tgca 21916497 Query: 259 g-accttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagct 317 ||||||||||| ||||| ||||||| ||| |||| |||| || |||||||| |||| Sbjct: 21916498 ctaccttggatgacccgtaggccgacaagtcgacgccctcggccttctccttctcgagct 21916557 Query: 318 gctccttgatccaaaaatacgtgatcctcagcccatcct 356 ||||||||||||| || || ||||||||||| ||||||| Sbjct: 21916558 gctccttgatccagaagtatgtgatcctcagaccatcct 21916596 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 449 tggatgggcagctgcttgttctcgaagc 476 ||||| ||||||||||||||||| |||| Sbjct: 21798570 tggataggcagctgcttgttctctaagc 21798597
>gb|AY104279.1| Zea mays PCO103545 mRNA sequence Length = 1547 Score = 256 bits (129), Expect = 8e-65 Identities = 282/333 (84%) Strand = Plus / Minus Query: 305 tccttctccagctgctccttgatccaaaaatacgtgatcctcagcccatccttcagcctc 364 |||||||| | |||||| |||||||| || || |||| || |||||||||||| ||| || Sbjct: 1150 tccttctcgatctgctctttgatccagaagtaggtgaaccgcagcccatccttgagcttc 1091 Query: 365 atggttggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacgg 424 || || || ||||||||||||||||||||||| || |||||||||||||| || || ||| Sbjct: 1090 atcgtcggggcccagccaagcttctccttgataagggtgttgtcagagttgcgcccgcgg 1031 Query: 425 acgccctcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggact 484 || || || |||||||||||||||||||||||||||| | | | ||| |||||||| || Sbjct: 1030 accccttccgggccagggatgtggtggatgggcagcttcctatcctcaaagcccagcacg 971 Query: 485 atctcagccatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcgg 544 ||||||||||||||||||||||||||||| ||||| || |||||||| || ||||||||| Sbjct: 970 atctcagccatctcgttcatgctcaccatctcatcgcttccgatgttcactggctcgcgg 911 Query: 545 aaatcagactttgtgagcctgaggacaccctccacacattcatcaataaatgtgaaggat 604 || || ||||| || | || || ||||||||||| || || || || || |||||||| Sbjct: 910 aagtctgacttggtcaatctcagaacaccctccacgcactcgtcgatgaaggtgaaggac 851 Query: 605 ctagtctgcagaccatctccccacatctcaaac 637 || ||||| |||||||| ||||||||||||||| Sbjct: 850 ctggtctggagaccatcgccccacatctcaaac 818 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 202 ctccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtgg 254 ||||||||| || ||||||||||||||||| ||||| || || ||||| |||| Sbjct: 1253 ctccttgccgtcggcggcgcggagggagcccagctgcacgggcgcctgggtgg 1201
>gb|BT016578.1| Zea mays clone Contig411 mRNA sequence Length = 1538 Score = 244 bits (123), Expect = 3e-61 Identities = 267/315 (84%) Strand = Plus / Minus Query: 323 ttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccagcca 382 |||||||| || || |||| || |||||||||||| ||| |||| || || ||||||||| Sbjct: 1130 ttgatccagaagtaggtgaaccgcagcccatccttgagcttcatcgtcggggcccagcca 1071 Query: 383 agcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccaggg 442 |||||||||||||| || |||||||||||||| || || ||||| || || ||||||||| Sbjct: 1070 agcttctccttgataagggtgttgtcagagttgcgcccgcggaccccttccgggccaggg 1011 Query: 443 atgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagccatctcgttc 502 ||||||||||||||||||| | | | ||| |||||||| || |||||||||||||||||| Sbjct: 1010 atgtggtggatgggcagcttcctatcctcaaagcccagcacgatctcagccatctcgttc 951 Query: 503 atgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttgtgagc 562 ||||||||||| ||||| || |||||||| || ||||||||||| || ||||| || | Sbjct: 950 atgctcaccatctcatcgcttccgatgttcactggctcgcggaagtctgacttggtcaat 891 Query: 563 ctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatct 622 || || ||||||||||| || || || || || |||||||| || ||||| |||||||| Sbjct: 890 ctcagaacaccctccacgcactcgtcgatgaaggtgaaggacctggtctggagaccatcg 831 Query: 623 ccccacatctcaaac 637 ||||||||||||||| Sbjct: 830 ccccacatctcaaac 816 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 202 ctccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtgg 254 ||||||||| || |||| |||||||||||| ||||| || || ||||| |||| Sbjct: 1251 ctccttgccgtcggcggggcggagggagcccagctgcacgggcgcctgggtgg 1199
>gb|BT013590.1| Lycopersicon esculentum clone 132353F, mRNA sequence Length = 1880 Score = 186 bits (94), Expect = 6e-44 Identities = 259/314 (82%) Strand = Plus / Minus Query: 320 tccttgatccaaaaatacgtgatcctcagcccatccttcagcctcatggttggagcccag 379 ||||| ||||| |||||||| ||||||| ||||||||||| | |||| | ||||||||| Sbjct: 1199 tcctttatccagaaatacgtaatcctcaacccatccttcaacttcatattaggagcccag 1140 Query: 380 ccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggcca 439 |||||||| ||||||||||| |||||||||||||| || ||||| || ||||| || || Sbjct: 1139 ccaagcttttccttgatgagagtgttgtcagagtttcgaccacgcacaccctctggtcct 1080 Query: 440 gggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagccatctcg 499 || ||||| ||||| || || | |||| || |||| ||||||||||| |||||||| Sbjct: 1079 ggaatgtgatggatcggaaggttcttgccatcaaagctgaggactatctctgccatctca 1020 Query: 500 ttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttgtg 559 |||||||| ||||| |||||||| |||||||| |||||||| | ||| || || ||||| Sbjct: 1019 ttcatgcttaccatctcatcacttccgatgttcacaggctctctgaagtcggattttgtt 960 Query: 560 agcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagacca 619 | ||| |||||||| || ||||| |||||||| || ||||| |||| ||| ||| ||| Sbjct: 959 aacctcaggacaccttcaacacactcatcaatgaaggtgaaagatcgagtttgctttcca 900 Query: 620 tctccccacatctc 633 |||||||||||||| Sbjct: 899 tctccccacatctc 886
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 184 bits (93), Expect = 2e-43 Identities = 162/185 (87%) Strand = Plus / Minus Query: 374 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 433 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 68168 gcccagccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcg 68109 Query: 434 gggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagcc 493 || ||||||||||||||||||||||||| | | | |||||||| || | || |||||| Sbjct: 68108 ggtccagggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagcc 68049 Query: 494 atctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagac 553 |||||||||||||| ||||||||||| || || ||||| || ||||| ||||| || ||| Sbjct: 68048 atctcgttcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgac 67989 Query: 554 tttgt 558 ||||| Sbjct: 67988 tttgt 67984 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 569 acaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatctccccac 628 |||||||| ||||| ||||| || ||||||||||| | ||||| || ||||| |||||| Sbjct: 67877 acaccctcaacacactcatctatgaatgtgaaggaccgggtctggaggccatcaccccac 67818 Query: 629 atctcaaac 637 ||||||||| Sbjct: 67817 atctcaaac 67809 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Minus Query: 201 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 260 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 68474 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 68415 Query: 261 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 320 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 68414 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 68355 Query: 321 ccttgatccaaaaatacgtgatcctcagcccatcct 356 |||||||||| || || |||| ||||||||| |||| Sbjct: 68354 ccttgatccagaagtaggtgaacctcagcccgtcct 68319
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 184 bits (93), Expect = 2e-43 Identities = 162/185 (87%) Strand = Plus / Minus Query: 374 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 433 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 14128530 gcccagccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcg 14128471 Query: 434 gggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagcc 493 || ||||||||||||||||||||||||| | | | |||||||| || | || |||||| Sbjct: 14128470 ggtccagggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagcc 14128411 Query: 494 atctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagac 553 |||||||||||||| ||||||||||| || || ||||| || ||||| ||||| || ||| Sbjct: 14128410 atctcgttcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgac 14128351 Query: 554 tttgt 558 ||||| Sbjct: 14128350 tttgt 14128346 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 569 acaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatctccccac 628 |||||||| ||||| ||||| || ||||||||||| | ||||| || ||||| |||||| Sbjct: 14128239 acaccctcaacacactcatctatgaatgtgaaggaccgggtctggaggccatcaccccac 14128180 Query: 629 atctcaaac 637 ||||||||| Sbjct: 14128179 atctcaaac 14128171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Minus Query: 201 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 260 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 14128836 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 14128777 Query: 261 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 320 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 14128776 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 14128717 Query: 321 ccttgatccaaaaatacgtgatcctcagcccatcct 356 |||||||||| || || |||| ||||||||| |||| Sbjct: 14128716 ccttgatccagaagtaggtgaacctcagcccgtcct 14128681
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 184 bits (93), Expect = 2e-43 Identities = 162/185 (87%) Strand = Plus / Minus Query: 374 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 433 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 603 gcccagccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcg 544 Query: 434 gggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagcc 493 || ||||||||||||||||||||||||| | | | |||||||| || | || |||||| Sbjct: 543 ggtccagggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagcc 484 Query: 494 atctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagac 553 |||||||||||||| ||||||||||| || || ||||| || ||||| ||||| || ||| Sbjct: 483 atctcgttcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgac 424 Query: 554 tttgt 558 ||||| Sbjct: 423 tttgt 419 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 569 acaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatctccccac 628 |||||||| ||||| ||||| || ||||||||||| | ||||| || ||||| |||||| Sbjct: 312 acaccctcaacacactcatctatgaatgtgaaggaccgggtctggaggccatcaccccac 253 Query: 629 atctcaaac 637 ||||||||| Sbjct: 252 atctcaaac 244 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Minus Query: 201 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 260 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 909 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 850 Query: 261 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 320 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 849 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 790 Query: 321 ccttgatccaaaaatacgtgatcctcagcccatcct 356 |||||||||| || || |||| ||||||||| |||| Sbjct: 789 ccttgatccagaagtaggtgaacctcagcccgtcct 754
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 184 bits (93), Expect = 2e-43 Identities = 162/185 (87%) Strand = Plus / Minus Query: 374 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 433 |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| Sbjct: 14136772 gcccagccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcg 14136713 Query: 434 gggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagcc 493 || ||||||||||||||||||||||||| | | | |||||||| || | || |||||| Sbjct: 14136712 ggtccagggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagcc 14136653 Query: 494 atctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagac 553 |||||||||||||| ||||||||||| || || ||||| || ||||| ||||| || ||| Sbjct: 14136652 atctcgttcatgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgac 14136593 Query: 554 tttgt 558 ||||| Sbjct: 14136592 tttgt 14136588 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 569 acaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatctccccac 628 |||||||| ||||| ||||| || ||||||||||| | ||||| || ||||| |||||| Sbjct: 14136481 acaccctcaacacactcatctatgaatgtgaaggaccgggtctggaggccatcaccccac 14136422 Query: 629 atctcaaac 637 ||||||||| Sbjct: 14136421 atctcaaac 14136413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 124/156 (79%) Strand = Plus / Minus Query: 201 actccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtggtgcaga 260 ||||||||||||| || || ||||||||||| ||||| ||||| ||||| |||| | Sbjct: 14137078 actccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacacca 14137019 Query: 261 ccttggatgatccgtatgccgacacgtctgcgccttcggatttttccttctccagctgct 320 |||||||||| ||||| ||| | ||| |||| | || || |||||||| | ||||| Sbjct: 14137018 ccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctgct 14136959 Query: 321 ccttgatccaaaaatacgtgatcctcagcccatcct 356 |||||||||| || || |||| ||||||||| |||| Sbjct: 14136958 ccttgatccagaagtaggtgaacctcagcccgtcct 14136923
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 168 bits (85), Expect = 1e-38 Identities = 154/177 (87%) Strand = Plus / Minus Query: 382 aagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcggggccagg 441 |||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||||| Sbjct: 144651 aagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccagg 144592 Query: 442 gatgtggtggatgggcagctgcttgttctcgaagcccaggactatctcagccatctcgtt 501 |||||||||||||||||||| | | | |||||||| || | || |||||||||||||| Sbjct: 144591 gatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgtt 144532 Query: 502 catgctcaccatttcatcactcccgatgtttacaggctcgcggaaatcagactttgt 558 |||||| ||||||||||| || || ||||| || ||||| ||||| || |||||||| Sbjct: 144531 catgcttaccatttcatcgcttccaatgttcactggctcacggaagtccgactttgt 144475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 569 acaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatctccccac 628 |||||||| ||||| ||||| || ||||||||||| | ||||| || ||||| |||||| Sbjct: 144368 acaccctcaacacactcatctatgaatgtgaaggaccgggtctggaggccatcaccccac 144309 Query: 629 atctcaaac 637 ||||||||| Sbjct: 144308 atctcaaac 144300
>ref|NM_122767.2| Arabidopsis thaliana GDP-mannose 3,5-epimerase/ catalytic AT5G28840 mRNA, complete cds Length = 1611 Score = 149 bits (75), Expect = 1e-32 Identities = 219/267 (82%) Strand = Plus / Minus Query: 371 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 430 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 1140 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 1081 Query: 431 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 490 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 1080 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 1021 Query: 491 gccatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 550 |||||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 1020 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 961 Query: 551 gactttgtgagcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtc 610 || ||||| | |||||| ||||| || ||||| ||||| ||||| || || || | ||| Sbjct: 960 gattttgtcaacctgagtacaccttcaacacactcatcgataaaggtaaaagaacgggtc 901 Query: 611 tgcagaccatctccccacatctcaaac 637 || || ||||||||||||||||||||| Sbjct: 900 tgaagcccatctccccacatctcaaac 874
>gb|AY116953.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1134 Score = 149 bits (75), Expect = 1e-32 Identities = 219/267 (82%) Strand = Plus / Minus Query: 371 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 430 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 962 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 903 Query: 431 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 490 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 902 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 843 Query: 491 gccatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 550 |||||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 842 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 783 Query: 551 gactttgtgagcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtc 610 || ||||| | |||||| ||||| || ||||| ||||| ||||| || || || | ||| Sbjct: 782 gattttgtcaacctgagtacaccttcaacacactcatcgataaaggtaaaagaacgggtc 723 Query: 611 tgcagaccatctccccacatctcaaac 637 || || ||||||||||||||||||||| Sbjct: 722 tgaagcccatctccccacatctcaaac 696
>gb|AY057694.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1404 Score = 149 bits (75), Expect = 1e-32 Identities = 219/267 (82%) Strand = Plus / Minus Query: 371 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 430 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 1025 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 966 Query: 431 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 490 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 965 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 906 Query: 491 gccatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 550 |||||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 905 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 846 Query: 551 gactttgtgagcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtc 610 || ||||| | |||||| ||||| || ||||| ||||| ||||| || || || | ||| Sbjct: 845 gattttgtcaacctgagtacaccttcaacacactcatcgataaaggtaaaagaacgggtc 786 Query: 611 tgcagaccatctccccacatctcaaac 637 || || ||||||||||||||||||||| Sbjct: 785 tgaagcccatctccccacatctcaaac 759
>gb|AY057660.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1452 Score = 149 bits (75), Expect = 1e-32 Identities = 219/267 (82%) Strand = Plus / Minus Query: 371 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 430 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 1025 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 966 Query: 431 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 490 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 965 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 906 Query: 491 gccatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 550 |||||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 905 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 846 Query: 551 gactttgtgagcctgaggacaccctccacacattcatcaataaatgtgaaggatctagtc 610 || ||||| | |||||| ||||| || ||||| ||||| ||||| || || || | ||| Sbjct: 845 gattttgtcaacctgagtacaccttcaacacactcatcgataaaggtaaaagaacgggtc 786 Query: 611 tgcagaccatctccccacatctcaaac 637 || || ||||||||||||||||||||| Sbjct: 785 tgaagcccatctccccacatctcaaac 759
>gb|DQ268848.1| Solanum tuberosum clone 155B09 NAD-dependent epimerase/dehydratase family protein-like protein mRNA, complete cds Length = 1521 Score = 149 bits (75), Expect = 1e-32 Identities = 273/339 (80%) Strand = Plus / Minus Query: 299 gatttttccttctccagctgctccttgatccaaaaatacgtgatcctcagcccatccttc 358 ||||| || ||||| | ||||||||||||||| || || || || ||||| ||||||||| Sbjct: 1055 gatttctctttctcgatctgctccttgatccagaagtatgtaattctcagaccatccttc 996 Query: 359 agcctcatggttggagcccagccaagcttctccttgatgagtgtgttgtcagagttacgg 418 | ||||| ||||||||||| ||||||||||| || || ||||||||||| ||||| || Sbjct: 995 aatctcattgttggagcccaaccaagcttctcttttatcagtgtgttgtctgagttgcga 936 Query: 419 ccacggacgccctcggggccagggatgtggtggatgggcagctgcttgttctcgaagccc 478 ||||||||||| || ||||| || ||||| |||| | |||| ||||| ||| |||| Sbjct: 935 ccacggacgccttctgggcctggaatgtgttggacagcaagcttcttgtcctcaaagctg 876 Query: 479 aggactatctcagccatctcgttcatgctcaccatttcatcactcccgatgtttacaggc 538 || || |||||||||||||| |||||||| ||||| |||||||| || ||||| || ||| Sbjct: 875 agaaccatctcagccatctcattcatgctgaccatctcatcacttcctatgttcactggc 816 Query: 539 tcgcggaaatcagactttgtgagcctgaggacaccctccacacattcatcaataaatgtg 598 || ||||| || || ||||| | || || || || || ||||| |||||||| || ||| Sbjct: 815 tctcggaagtcggattttgtcaatctaagaaccccttcaacacactcatcaatgaaggtg 756 Query: 599 aaggatctagtctgcagaccatctccccacatctcaaac 637 || || | || || || |||||||||||||| |||||| Sbjct: 755 aatgaacgtgtttgaagtccatctccccacatttcaaac 717
>gb|DQ207722.1| Zea mays cultivar B73 IDP512 marker Length = 527 Score = 111 bits (56), Expect = 3e-21 Identities = 80/88 (90%) Strand = Plus / Plus Query: 374 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 433 ||||||||||||||||||||||| || |||||||||||||| || || ||||| || || Sbjct: 371 gcccagccaagcttctccttgataagggtgttgtcagagttgcgcccgcggaccccttcc 430 Query: 434 gggccagggatgtggtggatgggcagct 461 |||||||||||||||||||||||||||| Sbjct: 431 gggccagggatgtggtggatgggcagct 458 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 202 ctccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtgg 254 ||||||||| || ||||||||||||||||| ||||| || || ||||| |||| Sbjct: 107 ctccttgccgtcggcggcgcggagggagcccagctgcacgggcgcctgggtgg 159 Score = 40.1 bits (20), Expect = 8.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 305 tccttctccagctgctccttgatccaaaaatacgtgatcctcagcccatcct 356 |||||||| | |||||| |||||||| || || |||| || ||||||||||| Sbjct: 210 tccttctcgatctgctctttgatccagaagtaggtgaaccgcagcccatcct 261
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 111 bits (56), Expect = 3e-21 Identities = 155/188 (82%) Strand = Plus / Plus Query: 371 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 430 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 18922 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 18981 Query: 431 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 490 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 18982 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 19041 Query: 491 gccatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 550 |||||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 19042 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 19101 Query: 551 gactttgt 558 || ||||| Sbjct: 19102 gattttgt 19109 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Plus Query: 562 cctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatc 621 |||||| ||||| || ||||| ||||| ||||| || || || | ||||| || ||||| Sbjct: 19191 cctgagtacaccttcaacacactcatcgataaaggtaaaagaacgggtctgaagcccatc 19250 Query: 622 tccccacatctcaaac 637 |||||||||||||||| Sbjct: 19251 tccccacatctcaaac 19266
>dbj|AK118786.1| Arabidopsis thaliana mRNA, clone: RAFL21-11-O14 Length = 550 Score = 111 bits (56), Expect = 3e-21 Identities = 155/188 (82%) Strand = Plus / Plus Query: 371 ggagcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccc 430 |||||||| |||||||| || ||||| || ||||||| |||||||| ||||| || || Sbjct: 7 ggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacacct 66 Query: 431 tcggggccagggatgtggtggatgggcagctgcttgttctcgaagcccaggactatctca 490 || |||||||| |||||||| || || |||| ||| | ||| |||| || || |||||| Sbjct: 67 tccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctca 126 Query: 491 gccatctcgttcatgctcaccatttcatcactcccgatgtttacaggctcgcggaaatca 550 |||||||| |||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 127 gccatctcattcatgctcaccatctcatcgcttccgatgttcaccggctcacggaaatct 186 Query: 551 gactttgt 558 || ||||| Sbjct: 187 gattttgt 194 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Plus Query: 562 cctgaggacaccctccacacattcatcaataaatgtgaaggatctagtctgcagaccatc 621 |||||| ||||| || ||||| ||||| ||||| || || || | ||||| || ||||| Sbjct: 276 cctgagtacaccttcaacacactcatcgataaaggtaaaagaacgggtctgaagcccatc 335 Query: 622 tccccacatctcaaac 637 |||||||||||||||| Sbjct: 336 tccccacatctcaaac 351
>gb|DQ207723.1| Zea mays cultivar inbred line Mo17 IDP512 marker Length = 473 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 374 gcccagccaagcttctccttgatgagtgtgttgtcagagttacggccacggacgccctcg 433 ||||||||||||||||||||||| || |||||||||||||| || || ||||| || || Sbjct: 379 gcccagccaagcttctccttgataagggtgttgtcagagttgcgcccgcggaccccttcc 438 Query: 434 gggccagggatgtggtggatgg 455 |||||||||||||||||||||| Sbjct: 439 gggccagggatgtggtggatgg 460 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 202 ctccttgccatctgcggcgcggagggagccaagctggaccggtgcctgcgtgg 254 ||||||||| || ||||||||||||||||| ||||| || || ||||| |||| Sbjct: 115 ctccttgccgtcggcggcgcggagggagcccagctgcacgggcgcctgggtgg 167 Score = 40.1 bits (20), Expect = 8.7 Identities = 44/52 (84%) Strand = Plus / Plus Query: 305 tccttctccagctgctccttgatccaaaaatacgtgatcctcagcccatcct 356 |||||||| | |||||| |||||||| || || |||| || ||||||||||| Sbjct: 218 tccttctcgatctgctctttgatccagaagtaggtgaaccgcagcccatcct 269
>gb|AY830138.1| Ipomoea batatas cultivar Beauregard clone BAC117E14, complete sequence Length = 99025 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 21 tttacatgtacaaataaaatgtt 43 ||||||||||||||||||||||| Sbjct: 61371 tttacatgtacaaataaaatgtt 61349
>ref|XM_322466.1| Neurospora crassa OR74A hypothetical protein (NCU00381.1) partial mRNA Length = 3465 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 aacatcctcttgcgccaagcag 75 |||||||||||||||||||||| Sbjct: 3161 aacatcctcttgcgccaagcag 3182
>ref|XM_952174.1| Neurospora crassa OR74A hypothetical protein (NCU00381.1) partial mRNA Length = 3465 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 54 aacatcctcttgcgccaagcag 75 |||||||||||||||||||||| Sbjct: 3161 aacatcctcttgcgccaagcag 3182
>emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in linkage group 11, complete sequence Length = 128109 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 ataaaatgtttaacattaataa 55 |||||||||||||||||||||| Sbjct: 90446 ataaaatgtttaacattaataa 90467
>emb|CT486003.10| Mouse DNA sequence from clone RP23-415F11 on chromosome 14, complete sequence Length = 181037 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 510 ccatttcatcactcccgatgtttaca 535 ||||||||||||||| |||||||||| Sbjct: 92740 ccatttcatcactcctgatgtttaca 92765
>gb|AC133495.4| Mus musculus BAC clone RP24-331G15 from chromosome 14, complete sequence Length = 195118 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 576 ccacacattcatcaataaatg 596 ||||||||||||||||||||| Sbjct: 50129 ccacacattcatcaataaatg 50149
>ref|XM_714481.1| Candida albicans SC5314 hypothetical protein (CaO19_9547), mRNA Length = 2130 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttga 326 ||||||||||||||||||||| Sbjct: 1538 ccttctccagctgctccttga 1518
>ref|XM_714352.1| Candida albicans SC5314 hypothetical protein (CaO19_1995), mRNA Length = 2130 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttga 326 ||||||||||||||||||||| Sbjct: 1538 ccttctccagctgctccttga 1518
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 aaatggtgtgacaactgacaa 167 ||||||||||||||||||||| Sbjct: 6185580 aaatggtgtgacaactgacaa 6185560
>ref|XM_848981.1| PREDICTED: Canis familiaris similar to NACHT, LRR and PYD containing protein 10 (LOC611323), mRNA Length = 2061 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttgatcca 330 ||||||||| ||||||||||||||| Sbjct: 1108 ccttctccatctgctccttgatcca 1084
>emb|CR654217.2|CNS0F3RJ Tetraodon nigroviridis full-length cDNA Length = 1435 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ttccttctccagctgctcctt 324 ||||||||||||||||||||| Sbjct: 146 ttccttctccagctgctcctt 126
>emb|CR645237.2|CNS0EWU3 Tetraodon nigroviridis full-length cDNA Length = 1432 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ttccttctccagctgctcctt 324 ||||||||||||||||||||| Sbjct: 139 ttccttctccagctgctcctt 119
>ref|XM_499876.1| Yarrowia lipolytica CLIB122, YALI0A08448g predicted mRNA Length = 993 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 tccttctccagctgctccttg 325 ||||||||||||||||||||| Sbjct: 785 tccttctccagctgctccttg 765
>emb|AL031431.8|HS462O23 Human DNA sequence from clone RP3-462O23 on chromosome 1p35.1-36.12 Contains the 3' end of the gene for sister-of-mammalian grainyhead (SOM), a novel gene (LOC90529) and a novel gene (DJ462O23.2), complete sequence Length = 154154 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 26 atgtacaaataaaatgtttaacattaataacat 58 |||||||| |||||||||||||| |||||||| Sbjct: 50169 atgtacaagtaaaatgtttaacaacaataacat 50201
>ref|XM_793921.1| PREDICTED: Strongylocentrotus purpuratus similar to SLIT-ROBO Rho GTPase activating protein 3 (LOC594484), mRNA Length = 1425 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttga 326 ||||||||||||||||||||| Sbjct: 34 ccttctccagctgctccttga 14
>ref|XM_966297.1| PREDICTED: Tribolium castaneum similar to CG1221-PA, isoform A (LOC660033), mRNA Length = 1250 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 aaataaaatgtttaacattaa 52 ||||||||||||||||||||| Sbjct: 1230 aaataaaatgtttaacattaa 1250
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 cttcggatttttccttctcca 314 ||||||||||||||||||||| Sbjct: 845570 cttcggatttttccttctcca 845550
>gb|AC134698.10| Homo sapiens chromosome 8, clone RP11-359P18, complete sequence Length = 173305 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 437 ccagggatgtggtggatgggc 457 ||||||||||||||||||||| Sbjct: 131613 ccagggatgtggtggatgggc 131633
>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5, complete sequence Length = 156095 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 tgacaactgacaaacaactga 175 ||||||||||||||||||||| Sbjct: 11748 tgacaactgacaaacaactga 11768
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 aaatggtgtgacaactgacaa 167 ||||||||||||||||||||| Sbjct: 6184793 aaatggtgtgacaactgacaa 6184773
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 aaatggtgtgacaactgacaa 167 ||||||||||||||||||||| Sbjct: 24191 aaatggtgtgacaactgacaa 24171
>emb|AL935276.16| Zebrafish DNA sequence from clone CH211-273J2, complete sequence Length = 164481 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 aaataaaatgtttaacattaa 52 ||||||||||||||||||||| Sbjct: 49762 aaataaaatgtttaacattaa 49742
>gb|U19103.1|YSCL8039 Saccharomyces cerevisiae chromosome XII cosmid 8039 Length = 31806 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 21 tttacatgtacaaataaaatgttta 45 ||||||||||||||||| ||||||| Sbjct: 1503 tttacatgtacaaataatatgttta 1527
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 tccttctccagctgctccttg 325 ||||||||||||||||||||| Sbjct: 843264 tccttctccagctgctccttg 843244
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 tccttctccagctgctcctt 324 |||||||||||||||||||| Sbjct: 554200 tccttctccagctgctcctt 554181
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ctccagctgctccttgatcc 329 |||||||||||||||||||| Sbjct: 2729798 ctccagctgctccttgatcc 2729817
>gb|AC139580.4| Mus musculus BAC clone RP23-110M15 from chromosome 13, complete sequence Length = 205480 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaaataaaatgtttaacat 49 |||||||||||||||||||| Sbjct: 102714 acaaataaaatgtttaacat 102695
>gb|AY292762.1| Pronolagus saundersiae MGF gene, partial intron sequence Length = 678 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tgacaactgacaaacaactg 174 |||||||||||||||||||| Sbjct: 449 tgacaactgacaaacaactg 468
>gb|BC056813.1| Danio rerio transcription elongation regulator 1 (CA150), mRNA (cDNA clone MGC:63740 IMAGE:2639923), complete cds Length = 3833 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gatgagtgtgttgtcagagt 413 |||||||||||||||||||| Sbjct: 3176 gatgagtgtgttgtcagagt 3195
>gb|AY231957.1| Drosophila yakuba clone yak-em_Tm2 mRNA sequence Length = 638 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttg 325 |||||||||||||||||||| Sbjct: 106 ccttctccagctgctccttg 87
>emb|CR696040.2|CNS0G00K Tetraodon nigroviridis full-length cDNA Length = 1345 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 tccttctccagctgctcctt 324 |||||||||||||||||||| Sbjct: 296 tccttctccagctgctcctt 277
>gb|AC073068.8| Homo sapiens BAC clone RP11-159I18 from 7, complete sequence Length = 171058 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 tcccgtttacaacagcacaaaaag 103 |||| ||||||||||||||||||| Sbjct: 92025 tcccatttacaacagcacaaaaag 92048
>gb|AC152067.21| Medicago truncatula clone mth2-22g24, complete sequence Length = 86972 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 acaaaaagctacaaatctca 115 |||||||||||||||||||| Sbjct: 17085 acaaaaagctacaaatctca 17066
>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete sequence Length = 180545 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 catcctcttgcgccaagcag 75 |||||||||||||||||||| Sbjct: 163581 catcctcttgcgccaagcag 163600
>emb|AL139220.13| Human DNA sequence from clone RP5-1198O20 on chromosome 1p32.3-34.2, complete sequence Length = 133728 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tttacatgtacaaataaaat 40 |||||||||||||||||||| Sbjct: 130153 tttacatgtacaaataaaat 130134
>emb|AL034395.6|HS243L18 Human DNA sequence from clone RP1-243L18 on chromosome 1p36.11-36.23 Contains the 5' end of a novel gene (KIAA1026) and a CpG island, complete sequence Length = 110654 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 ttccttctccagctgctcct 323 |||||||||||||||||||| Sbjct: 17316 ttccttctccagctgctcct 17335
>gb|AC009757.8| Homo sapiens chromosome 5, clone RP11-37M16, complete sequence Length = 166918 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ttttacatgtacaaataaaa 39 |||||||||||||||||||| Sbjct: 143789 ttttacatgtacaaataaaa 143808
>dbj|AB248956.1| Canis familiaris TLR7 mRNA for Toll-like receptor 7 protein, complete cds Length = 4244 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 cagccaagcttctccttgatgagt 400 |||||||||||||||||| ||||| Sbjct: 3293 cagccaagcttctccttggtgagt 3270
>dbj|AK096106.1| Homo sapiens cDNA FLJ38787 fis, clone LIVER2001835, moderately similar to MAGO NASHI PROTEIN Length = 2673 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 29 tacaaataaaatgtttaacattaataac 56 |||||||||||||| ||| ||||||||| Sbjct: 1833 tacaaataaaatgtgtaatattaataac 1806
>gb|AC008825.6| Homo sapiens chromosome 5 clone CTD-2134P3, complete sequence Length = 155495 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 ttttacatgtacaaataaaa 39 |||||||||||||||||||| Sbjct: 77624 ttttacatgtacaaataaaa 77643
>gb|AC126778.9| Medicago truncatula clone mth2-32j21, complete sequence Length = 110448 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaaataaaatgtttaacat 49 |||||||||||||||||||| Sbjct: 508 acaaataaaatgtttaacat 489
>emb|BX569781.7| Zebrafish DNA sequence from clone DKEY-72L18 in linkage group 17, complete sequence Length = 170138 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 tgtgacaactgacaaacaac 172 |||||||||||||||||||| Sbjct: 10326 tgtgacaactgacaaacaac 10345
>dbj|AB226775.1| Aspergillus oryzae cDNA, contig sequence: AoEST3637 Length = 711 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 acaccctccacacattcatc 588 |||||||||||||||||||| Sbjct: 194 acaccctccacacattcatc 213
>gb|AC020782.12| Homo sapiens chromosome 8, clone RP11-562L3, complete sequence Length = 104745 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aataaaatgtttaacattaa 52 |||||||||||||||||||| Sbjct: 100446 aataaaatgtttaacattaa 100465
>gb|AC009927.10| Homo sapiens chromosome 8, clone RP11-114M5, complete sequence Length = 166985 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aataaaatgtttaacattaa 52 |||||||||||||||||||| Sbjct: 28123 aataaaatgtttaacattaa 28142
>ref|NM_169645.2| Drosophila melanogaster Tropomyosin 2 CG4843-RC, transcript variant C (Tm2), mRNA Length = 1015 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttg 325 |||||||||||||||||||| Sbjct: 359 ccttctccagctgctccttg 340
>ref|NM_169644.1| Drosophila melanogaster Tropomyosin 2 CG4843-RB, transcript variant B (Tm2), mRNA Length = 1514 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttg 325 |||||||||||||||||||| Sbjct: 356 ccttctccagctgctccttg 337
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 acaccctccacacattcatc 588 |||||||||||||||||||| Sbjct: 1012995 acaccctccacacattcatc 1013014
>ref|NM_079637.4| Drosophila melanogaster Tropomyosin 2 CG4843-RA, transcript variant A (Tm2), mRNA Length = 1517 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttg 325 |||||||||||||||||||| Sbjct: 359 ccttctccagctgctccttg 340
>gb|AY071087.1| Drosophila melanogaster RE15528 full length cDNA Length = 1244 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttg 325 |||||||||||||||||||| Sbjct: 359 ccttctccagctgctccttg 340
>ref|XM_696925.1| PREDICTED: Danio rerio hypothetical protein LOC554766 (LOC554766), mRNA Length = 3807 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gatgagtgtgttgtcagagt 413 |||||||||||||||||||| Sbjct: 3167 gatgagtgtgttgtcagagt 3186
>gb|AC005087.2|AC005087 Homo sapiens BAC clone CTA-306D19 from 1, complete sequence Length = 53204 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tttacatgtacaaataaaat 40 |||||||||||||||||||| Sbjct: 28771 tttacatgtacaaataaaat 28790
>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone BACR13A02, complete sequence Length = 166141 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttg 325 |||||||||||||||||||| Sbjct: 71708 ccttctccagctgctccttg 71689
>gb|AC096736.3| Homo sapiens BAC clone RP11-171N4 from 4, complete sequence Length = 172989 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaataaaatgtttaacatta 51 |||||||||||||||||||| Sbjct: 127336 aaataaaatgtttaacatta 127355
>ref|NM_198357.1| Danio rerio transcription elongation regulator 1 (CA150) (tcerg1), mRNA Length = 3833 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 gatgagtgtgttgtcagagt 413 |||||||||||||||||||| Sbjct: 3176 gatgagtgtgttgtcagagt 3195
>gb|AC108059.6| Homo sapiens BAC clone RP11-398G9 from 2, complete sequence Length = 124950 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 acaaataaaatgtttaacat 49 |||||||||||||||||||| Sbjct: 75850 acaaataaaatgtttaacat 75831
>gb|AC013473.8| Homo sapiens BAC clone RP11-504G5 from 2, complete sequence Length = 170781 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tacatgtacaaataaaatgt 42 |||||||||||||||||||| Sbjct: 165768 tacatgtacaaataaaatgt 165787
>gb|AC021049.12| Homo sapiens 12 BAC RP11-904M10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175315 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 29 tacaaataaaatgtttaacattaataac 56 |||||||||||||| ||| ||||||||| Sbjct: 141239 tacaaataaaatgtgtaatattaataac 141212
>dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome Length = 4202352 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gactgaatcaagaaatggtg 154 |||||||||||||||||||| Sbjct: 1710709 gactgaatcaagaaatggtg 1710728
>dbj|BS000112.1| Pan troglodytes chromosome 22 clone:RP43-076J24, map 22, complete sequences Length = 169786 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 taaaatgtttaacattaata 54 |||||||||||||||||||| Sbjct: 36322 taaaatgtttaacattaata 36341
>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence Length = 189949 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 cctcagcccatccttcagcc 362 |||||||||||||||||||| Sbjct: 140533 cctcagcccatccttcagcc 140514
>emb|CR388075.14| Zebrafish DNA sequence from clone DKEY-223L3 in linkage group 4, complete sequence Length = 116492 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 29 tacaaataaaatgtttaacattaa 52 |||||||| ||||||||||||||| Sbjct: 69958 tacaaatataatgtttaacattaa 69981
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttg 325 |||||||||||||||||||| Sbjct: 116140 ccttctccagctgctccttg 116121
>emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-802A16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169936 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ttcagactgaatcaagaaat 150 |||||||||||||||||||| Sbjct: 85214 ttcagactgaatcaagaaat 85195
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ggattttacatgtacaaata 36 |||||||||||||||||||| Sbjct: 4077107 ggattttacatgtacaaata 4077088
>emb|BX000438.7| Zebrafish DNA sequence from clone CH211-209M20 in linkage group 20, complete sequence Length = 195087 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 attttacatgtacaaataaa 38 |||||||||||||||||||| Sbjct: 106291 attttacatgtacaaataaa 106310
>gb|K03277.1|DROTROPI2 D. melanogaster tropomyosin I gene, exons 2-5, complete cds Length = 3599 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttg 325 |||||||||||||||||||| Sbjct: 808 ccttctccagctgctccttg 789
>gb|K02622.1|DROTRO14 D.melanogaster gene for tropomyosin isoforms 127 and 129, exons 1 and 2 Length = 893 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 ccttctccagctgctccttg 325 |||||||||||||||||||| Sbjct: 210 ccttctccagctgctccttg 191
>dbj|AB024552.1| Bacillus halodurans gene for SLEB, YPEB, YPFA and CMK, complete and partial cds Length = 3482 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gactgaatcaagaaatggtg 154 |||||||||||||||||||| Sbjct: 2268 gactgaatcaagaaatggtg 2287
>dbj|AB065284.1| Cynops pyrrhogaster ngn mRNA for neurogenin related protein, complete cds Length = 1719 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 caaataaaatgtttaacatt 50 |||||||||||||||||||| Sbjct: 1675 caaataaaatgtttaacatt 1694 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,040,718 Number of Sequences: 3902068 Number of extensions: 6040718 Number of successful extensions: 139101 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138587 Number of HSP's gapped (non-prelim): 501 length of query: 637 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 614 effective length of database: 17,143,297,704 effective search space: 10525984790256 effective search space used: 10525984790256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
