>CNGC1_ARATH (O65717) Cyclic nucleotide-gated ion channel 1 (AtCNGC1) (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 1)
          Length = 716

 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 46/83 (55%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLFEKEKRLQAAIVSDD-STKLSLGAALYASRFAGNMMRILRRN-A 252
           +AAW RY +KKLE+SL E+E RLQ A+  +   +  SLGA +YASRFA N++R +RR+ +
Sbjct: 630 QAAWRRYIKKKLEESLKEEENRLQDALAKEACGSSPSLGATIYASRFAANILRTIRRSGS 689

Query: 251 TRKARLQERVPARLLQKPAEPNF 183
            RK R+ ER+P  LLQKPAEP+F
Sbjct: 690 VRKPRMPERMPPMLLQKPAEPDF 712

>CNGC3_ARATH (Q9SKD7) Probable cyclic nucleotide-gated ion channel 3 (AtCNGC3)|
           (Cyclic nucleotide- and calmodulin-regulated ion channel
           3)
          Length = 706

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLFEKEKRLQAAIVSDDS--TKLSLGAALYASRFAGNMMRILRRNA 252
           +AAW R+CR+KL  +L E+E +L   + +DDS   KL+LGAA+YASRFA + +R LR NA
Sbjct: 619 QAAWKRHCRRKLSKALREEEGKLHNTLQNDDSGGNKLNLGAAIYASRFASHALRNLRANA 678

Query: 251 TRKARLQERVPARLLQKPAEPNF 183
             +      +   L QKPA+P F
Sbjct: 679 AARNSRFPHMLTLLPQKPADPEF 701

>CNG10_ARATH (Q9LNJ0) Probable cyclic nucleotide-gated ion channel 10 (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 10)
           (CaM-regulated potassium ion channel)
          Length = 711

 Score = 72.0 bits (175), Expect = 6e-13
 Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 9/92 (9%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLFEKEKRLQAAIVSDD--------STKLSLGAALYASRFAGNMMR 270
           +AAW RYCR+KL  SL ++E RL+ A+ S D        S+ LSLG ALYASRFA N + 
Sbjct: 617 QAAWRRYCRRKLAKSLRDEEDRLREALASQDKEHNAATVSSSLSLGGALYASRFASNALH 676

Query: 269 ILRRNATRKARLQERVPARLL-QKPAEPNFFA 177
            LR N    + L  R    LL QKP EP+F A
Sbjct: 677 NLRHNI---SNLPPRYTLPLLPQKPTEPDFTA 705

>CNG13_ARATH (Q9LD40) Putative cyclic nucleotide-gated ion channel 13 (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 13)
          Length = 696

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLFEKEKRLQAAIVSDD---STKLSLGAALYASRFAGNMMRILRRN 255
           +AAW R+CR+KL  SL E+E R + AI   +   ++  SL A LYASRFA N +R LR N
Sbjct: 618 QAAWRRHCRRKLARSLTEEEDRFRNAITKRERNAASSSSLVATLYASRFASNALRNLRTN 677

Query: 254 ATRKARLQERVPARLLQKPAEPNF 183
                     +P  L  KP+EP+F
Sbjct: 678 ---------NLPL-LPPKPSEPDF 691

>CNGC5_ARATH (Q8RWS9) Probable cyclic nucleotide-gated ion channel 5 (AtCNGC5)|
           (Cyclic nucleotide- and calmodulin-regulated ion channel
           5)
          Length = 717

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
 Frame = -3

Query: 425 RAAWHRYC-RKKLEDSLFEKEKRLQAAIVSDDST--KLSLGAALYASRFAGNMMRILRRN 255
           +AAW RYC RKK+E      E   +AA VS  +     S+GAA  A++FA N +R + RN
Sbjct: 642 QAAWRRYCKRKKME------EAEAEAAAVSSSTAGPSYSIGAAFLATKFAANALRTIHRN 695

Query: 254 ATRKARLQERVPARLLQKPAEPNFFA 177
             R  ++++ V    LQKP EP+F A
Sbjct: 696 --RNTKIRDLVK---LQKPPEPDFTA 716

>CNGC6_ARATH (O82226) Probable cyclic nucleotide-gated ion channel 6 (AtCNGC6)|
           (Cyclic nucleotide- and calmodulin-regulated ion channel
           6)
          Length = 747

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
 Frame = -3

Query: 425 RAAWHRYC-RKKLED-SLFEKEKRLQAAIVSDDSTKLSLGAALYASRFAGNMMRILRRNA 252
           +AAW RY  RKKLE     E+E+   AA V    +  S+ A   AS+FA N +R + +N 
Sbjct: 658 QAAWRRYIKRKKLEQLRKEEEEEEAAAASVIAGGSPYSIRATFLASKFAANALRSVHKNR 717

Query: 251 TRKARLQERVPARLL--QKPAEPNFFA 177
           T K+ L       L+  QKP EP+F A
Sbjct: 718 TAKSTLLLSSTKELVKFQKPPEPDFSA 744

>CNG11_ARATH (Q9SKD6) Putative cyclic nucleotide-gated ion channel 11 (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 11)
          Length = 621

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 23/45 (51%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLFEKEKRLQAAIVSDDS--TKLSLGAALYA 297
           +AAW R+CR+KL  +L E+E +L   + +DDS   KL+LGAA+YA
Sbjct: 577 QAAWKRHCRRKLSKALREEEGKLHNTLQNDDSGGNKLNLGAAIYA 621

>CNGC9_ARATH (Q9M0A4) Putative cyclic nucleotide-gated ion channel 9 (Cyclic|
           nucleotide- and calmodulin-regulated ion channel 9)
          Length = 733

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 27/86 (31%), Positives = 44/86 (51%)
 Frame = -3

Query: 434 VLYRAAWHRYCRKKLEDSLFEKEKRLQAAIVSDDSTKLSLGAALYASRFAGNMMRILRRN 255
           +  +AAW RY +KK  + L ++E+  + ++        S+ A   AS+FA N +R + +N
Sbjct: 654 IFIQAAWRRYVKKKKLEQLRKEEEEGEGSVT-------SIRATFLASKFAANALRKVHKN 706

Query: 254 ATRKARLQERVPARLLQKPAEPNFFA 177
                   E V     QKP+EP+F A
Sbjct: 707 RIEAKSTIELVK---YQKPSEPDFSA 729

>CNG17_ARATH (Q8L7Z0) Probable cyclic nucleotide-gated ion channel 17 (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 17)
          Length = 720

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLF--------EKEKRLQAAIVSDDS-------TKLSLGAALYASR 291
           +AAW RY R+ +E++L         E E   +  +V ++        TK++LG  + ASR
Sbjct: 625 QAAWRRYKRRVMENNLTAIESMENEEGEVGEELVVVEEEECVEESPRTKMNLGVMVLASR 684

Query: 290 FAGNMMRILRRNATRKARLQERVPARLLQKPAEPNFFA 177
           FA N  R +     +   L         +KP EP+F A
Sbjct: 685 FAANTRRGVAAQRVKDVELPR------FKKPEEPDFSA 716

>CNGC7_ARATH (Q9S9N5) Putative cyclic nucleotide-gated ion channel 7 (Cyclic|
           nucleotide- and calmodulin-regulated ion channel 7)
          Length = 738

 Score = 37.0 bits (84), Expect = 0.022
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
 Frame = -3

Query: 425 RAAWHRYCRKKLED--SLFEKEKRL------------QAAIVSDDSTKLSLGAALYASRF 288
           +AAW RY R+K  +   + EKE+ L            +  +++   +   L + ++ASRF
Sbjct: 646 QAAWRRYSRRKNAELRRIEEKEEELGYEDEYDDESDKRPMVITRSESSSRLRSTIFASRF 705

Query: 287 AGNMMR--ILRRNATRKARLQERVPARLLQKPAEPNFFA 177
           A N ++   LR + + K  +        LQKP EP+F A
Sbjct: 706 AANALKGHRLRSSESSKTLIN-------LQKPPEPDFDA 737

>CNG14_ARATH (Q9SJA4) Putative cyclic nucleotide-gated ion channel 14 (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 14)
          Length = 726

 Score = 33.1 bits (74), Expect = 0.31
 Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 25/106 (23%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSL--------FEKEKRLQAAIVSD-----------------DSTKL 321
           + AW RY RKKL  SL        +++E+ +  A   +                  + K 
Sbjct: 625 QVAWRRYKRKKLAKSLSLAESFSSYDEEEAVAVAATEEMSHEGEAQSGAKARHHTSNVKP 684

Query: 320 SLGAALYASRFAGNMMRILRRNATRKARLQERVPARLLQKPAEPNF 183
              A + ASRFA        +N  R A   + V   +L KP EP+F
Sbjct: 685 HFAATILASRFA--------KNTRRTAHKLKDVEIPMLPKPDEPDF 722

>CNGC8_ARATH (Q9FXH6) Putative cyclic nucleotide-gated ion channel 8 (Cyclic|
           nucleotide- and calmodulin-regulated ion channel 8)
          Length = 753

 Score = 32.7 bits (73), Expect = 0.41
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 19/103 (18%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLFEKEKRLQAAIVSDD------------------STKLSLGAALY 300
           +AAW R+ R+K+ + L  KE+  +     DD                   +  +L + ++
Sbjct: 652 QAAWRRHLRRKIAE-LRRKEEEEEEMDYEDDEYYDDNMGGMVTRSDSSVGSSSTLRSTVF 710

Query: 299 ASRFAGNMMRILRRNATRKARLQERVPARL-LQKPAEPNFFAV 174
           ASRFA N ++        K R+ E   + + L KP+EP+F A+
Sbjct: 711 ASRFAANALK------GHKLRVTESSKSLMNLTKPSEPDFEAL 747

>CNG16_ARATH (Q9SU64) Putative cyclic nucleotide-gated ion channel 16 (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 16)
          Length = 705

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 23/105 (21%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLFEKEKRLQAAIVSD--------------------DSTKLSLGAA 306
           +AAW RY ++KL   L  +E+        D                     S   +L A 
Sbjct: 601 QAAWRRYMKRKLAMELARQEEEDDYFYDDDGDYQFEEDMPESNNNNGDENSSNNQNLSAT 660

Query: 305 LYASRFAGNMMRILRRNATRKARLQERVPARLLQ---KPAEPNFF 180
           + AS+FA N  R +  N     R+    P   +    KP +P FF
Sbjct: 661 ILASKFAANTKRGVLGNQRGSTRIDPDHPTLKMPKMFKPEDPGFF 705

>CNG12_ARATH (Q8GWD2) Probable cyclic nucleotide-gated ion channel 12 (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 12)
          Length = 649

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 20/81 (24%), Positives = 38/81 (46%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLFEKEKRLQAAIVSDDSTKLSLGAALYASRFAGNMMRILRRNATR 246
           +AAW ++C++KL  +   +             T+L+L + LY SRF    ++  R++   
Sbjct: 573 QAAWRKHCKRKLSKTRDNEN--------IPQGTQLNLASTLYVSRFVSKALQNRRKDTAD 624

Query: 245 KARLQERVPARLLQKPAEPNF 183
            +   +  P  +  KPA+  F
Sbjct: 625 CSSSPDMSPP-VPHKPADLEF 644

>EX1_HAEIN (P45188) Exodeoxyribonuclease I (EC 3.1.11.1) (Exonuclease I) (DNA|
           deoxyribophosphodiesterase) (dRPase)
          Length = 473

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -3

Query: 416 WHRYCRKKLEDSLFEKEKRLQAAIV--SDDSTKLSLGAALY 300
           W +Y + KLE S  E E  LQ  +   SD+S KLSL   +Y
Sbjct: 425 WKKYRQNKLEKSAVEFEASLQRLVEXHSDNSEKLSLLQQVY 465

>CNG18_ARATH (Q9LEQ3) Putative cyclic nucleotide-gated ion channel 18 (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 18)
          Length = 706

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 26/107 (24%)
 Frame = -3

Query: 425 RAAWHRYCRKKLEDSLF-----------------EKEKRLQAAIVSDDS----TKLSLGA 309
           ++AW RY R+KL   L                  E E+  +    SD+        +LGA
Sbjct: 593 QSAWRRYKRRKLAKELSLHESSGYYYPDETGYNEEDEETREYYYGSDEEGGSMDNTNLGA 652

Query: 308 ALYASRFAGNMMRILRRNAT-----RKARLQERVPARLLQKPAEPNF 183
            + AS+FA N  R   + A+     +K      +    L KP EP+F
Sbjct: 653 TILASKFAANTRRGTNQKASSSSTGKKDGSSTSLKMPQLFKPDEPDF 699

>VP41_BPAPS (Q9T1Q7) Putative protein p41|
          Length = 460

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 321 QSGSGTVRLAFCWQHDADLTEKCYPKG 241
           +SG   V +A+ W+HD +   K +PKG
Sbjct: 324 ESGGTPVLVAYHWKHDLERLLKAFPKG 350


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,954,829
Number of Sequences: 219361
Number of extensions: 1157993
Number of successful extensions: 3047
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3036
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)