>ref|XM_463324.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1506

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 312  cctatcattggcatcgaaatttangccttggatgccccttatagtggactc 362
            |||||| |||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 1494 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactc 1444

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                   
Query: 312      cctatcattggcatcgaaatttangccttggatgccccttatagtggactc 362
                |||||| |||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 21879547 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactc 21879497



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                                
Query: 102      cctttatttcgccagccagcccccatttctttgggtaagcaggctgcc 149
                ||||||||| ||||||||||| ||| | ||| |||| |||||||||||
Sbjct: 21879723 cctttatttagccagccagcctccagtacttcgggtcagcaggctgcc 21879676

>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1114B07
          Length = 148060

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                 
Query: 312    cctatcattggcatcgaaatttangccttggatgccccttatagtggactc 362
              |||||| |||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 108840 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactc 108790



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                              
Query: 102    cctttatttcgccagccagcccccatttctttgggtaagcaggctgcc 149
              ||||||||| ||||||||||| ||| | ||| |||| |||||||||||
Sbjct: 109016 cctttatttagccagccagcctccagtacttcgggtcagcaggctgcc 108969

>dbj|AK111947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E09, full
           insert sequence
          Length = 1340

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                              
Query: 312 cctatcattggcatcgaaatttangccttggatgccccttatagtggactc 362
           |||||| |||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 834 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactc 784



 Score = 48.1 bits (24), Expect = 0.022
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 102  cctttatttcgccagccagcccccatttctttgggtaagcaggctgcc 149
            ||||||||| ||||||||||| ||| | ||| |||| |||||||||||
Sbjct: 1010 cctttatttagccagccagcctccagtacttcgggtcagcaggctgcc 963

>dbj|AK111703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011C07, full
            insert sequence
          Length = 1851

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 312  cctatcattggcatcgaaatttangccttggatgccccttatagtggactc 362
            |||||| |||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 1684 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactc 1634

>dbj|AK111702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013G21, full
            insert sequence
          Length = 2953

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 312  cctatcattggcatcgaaatttangccttggatgccccttatagtggactc 362
            |||||| |||||||| ||||||| |||||||||||| ||||||||||||||
Sbjct: 2786 cctatcgttggcatcaaaatttaggccttggatgcctcttatagtggactc 2736

>ref|XM_476026.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1422

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 312  cctatcattggcatcgaaatttangccttggatgccccttatagtggactcg 363
            |||||||| | |||||||||||| ||| |||||||||| ||| || ||||||
Sbjct: 1410 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcg 1359

>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
              complete sequence
          Length = 142196

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                  
Query: 312    cctatcattggcatcgaaatttangccttggatgccccttatagtggactcg 363
              |||||||| | |||||||||||| ||| |||||||||| ||| || ||||||
Sbjct: 130041 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcg 130092

>gb|AC130727.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560F03,
             complete sequence
          Length = 45160

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 312   cctatcattggcatcgaaatttangccttggatgccccttatagtggactcg 363
             |||||||| | |||||||||||| ||| |||||||||| ||| || ||||||
Sbjct: 41888 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcg 41837

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                    
Query: 312      cctatcattggcatcgaaatttangccttggatgccccttatagtggactcg 363
                |||||||| | |||||||||||| ||| |||||||||| ||| || ||||||
Sbjct: 29351384 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcg 29351435

>dbj|AK111994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D10, full
            insert sequence
          Length = 2161

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 312  cctatcattggcatcgaaatttangccttggatgccccttatagtggactcg 363
            |||||||| | |||||||||||| ||| |||||||||| ||| || ||||||
Sbjct: 1595 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcg 1544

>dbj|AK111911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M05, full
            insert sequence
          Length = 2164

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 312  cctatcattggcatcgaaatttangccttggatgccccttatagtggactcg 363
            |||||||| | |||||||||||| ||| |||||||||| ||| || ||||||
Sbjct: 1601 cctatcatcgccatcgaaatttaggccctggatgccccgtatggtcgactcg 1550

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 141      caggctgcctcaccgctgcagc 162
                ||||||||||||||||||||||
Sbjct: 21322817 caggctgcctcaccgctgcagc 21322796

>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0656E03
          Length = 181786

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 141    caggctgcctcaccgctgcagc 162
              ||||||||||||||||||||||
Sbjct: 118193 caggctgcctcaccgctgcagc 118172

>gb|AC113548.22| Mus musculus chromosome 9, clone RP23-268F15, complete sequence
          Length = 195273

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 127    tttctttgggtaagcaggctg 147
              |||||||||||||||||||||
Sbjct: 128451 tttctttgggtaagcaggctg 128471

>emb|AL772178.2| Human DNA sequence from clone RP13-248L12 on chromosome X, complete
             sequence
          Length = 19345

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 177   tcacatggtgaagtagttcag 197
             |||||||||||||||||||||
Sbjct: 10742 tcacatggtgaagtagttcag 10722

>gb|AC164699.2| Echinops telfairi, clone Echinops telfairi -24221157A1, complete
            sequence
          Length = 38044

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 125  catttctttgggtaagcaggctgc 148
            |||||| |||||||||||||||||
Sbjct: 8940 catttcattgggtaagcaggctgc 8963

>gb|AC123549.5| Mus musculus BAC clone RP24-91K17 from chromosome 6, complete sequence
          Length = 182759

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 267    agaagatactggtagtgaaa 286
              ||||||||||||||||||||
Sbjct: 136482 agaagatactggtagtgaaa 136501

>gb|AC080144.11| Mus musculus chromosome 6, clone RP23-237K24, complete sequence
          Length = 184091

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    agaagatactggtagtgaaa 286
              ||||||||||||||||||||
Sbjct: 154569 agaagatactggtagtgaaa 154550

>emb|CT025376.2| Xenopus tropicalis finished cDNA, clone TGas140b22
          Length = 2062

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 33  aaaaggaaaactgtacagag 52
           ||||||||||||||||||||
Sbjct: 145 aaaaggaaaactgtacagag 164

>emb|AL133375.25| Human DNA sequence from clone RP3-330M21 on chromosome 6 Contains the
             3' end of the SRF gene for serum response factor (c-fos
             serum response element-binding transcription factor), a
             gene for a novel protein (KIAA0076 KIAA0708), the gene for
             a putative c-Myc-responsive protein (RCL), the gene for
             KIAA1855 protein and CpG islands, complete sequence
          Length = 117071

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 113   ccagccagcccccatttctttggg 136
             ||||||||||||||| ||||||||
Sbjct: 55642 ccagccagcccccatctctttggg 55665

>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete
              sequence
          Length = 404829

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 35     aaggaaaactgtacagaggcaaaa 58
              |||||||||||||| |||||||||
Sbjct: 117010 aaggaaaactgtactgaggcaaaa 117033

>dbj|BS000207.2| Pan troglodytes chromosome 22 clone:PTB-155J22, map 22, complete
            sequences
          Length = 193476

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 230  gcagatcatatactatacac 249
            ||||||||||||||||||||
Sbjct: 5379 gcagatcatatactatacac 5398

>dbj|BS000206.1| Pan troglodytes chromosome 22 clone:RP43-160M11, map 22, complete
              sequences
          Length = 181571

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gcagatcatatactatacac 249
              ||||||||||||||||||||
Sbjct: 156150 gcagatcatatactatacac 156169

>gb|AY919674.1| Homo sapiens amyloid beta (A4) precursor protein (protease nexin-II,
             Alzheimer disease) (APP) gene, complete cds
          Length = 293960

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   gcagatcatatactatacac 249
             ||||||||||||||||||||
Sbjct: 34190 gcagatcatatactatacac 34171

>dbj|AP001695.1| Homo sapiens genomic DNA, chromosome 21q, section 39/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 230    gcagatcatatactatacac 249
              ||||||||||||||||||||
Sbjct: 206401 gcagatcatatactatacac 206420

>dbj|AP000143.1| Homo sapiens genomic DNA, chromosome 21q21.2, LL56-APP region, clone
             B2291C14-R44F3, segment 8/10, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gcagatcatatactatacac 249
             ||||||||||||||||||||
Sbjct: 41170 gcagatcatatactatacac 41189

>dbj|D87675.1| Homo sapiens DNA for amyloid precursor protein, complete cds
          Length = 301692

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   gcagatcatatactatacac 249
             ||||||||||||||||||||
Sbjct: 41442 gcagatcatatactatacac 41423

>dbj|AP001594.1| Homo sapiens genomic DNA, chromosome 21, clone:KB580H10, APP-D21S292
             region, complete sequence
          Length = 100634

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gcagatcatatactatacac 249
             ||||||||||||||||||||
Sbjct: 11836 gcagatcatatactatacac 11855

>dbj|AP001439.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2,, clone:S459,
             LL56-APP region, complete sequence
          Length = 83661

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gcagatcatatactatacac 249
             ||||||||||||||||||||
Sbjct: 42219 gcagatcatatactatacac 42238

>dbj|AP000090.1| Homo sapiens genomic DNA of 21q22.1, APP related, B2291C14-T1533
             region, segment 7/7
          Length = 121597

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   gcagatcatatactatacac 249
             ||||||||||||||||||||
Sbjct: 80156 gcagatcatatactatacac 80175


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,829,361
Number of Sequences: 3902068
Number of extensions: 2829361
Number of successful extensions: 47432
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47345
Number of HSP's gapped (non-prelim): 87
length of query: 393
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 371
effective length of database: 17,147,199,772
effective search space: 6361611115412
effective search space used: 6361611115412
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)