>gb|AC104832.8| Mus Musculus Strain C57BL6/J Chromosome 12 BAC, RP23-38P6, complete
              sequence
          Length = 179216

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                       
Query: 38     tccaagcaaatagaacagagaaaca 62
              |||||||||||||||||||||||||
Sbjct: 177821 tccaagcaaatagaacagagaaaca 177797

>emb|CT030173.7| Mouse DNA sequence from clone RP24-264B23 on chromosome 12, complete
            sequence
          Length = 156510

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 38   tccaagcaaatagaacagagaaaca 62
            |||||||||||||||||||||||||
Sbjct: 8782 tccaagcaaatagaacagagaaaca 8758

>gb|AC140436.3| Mus musculus BAC clone RP23-85O2 from chromosome 9, complete sequence
          Length = 142560

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 34    gaaatccaagcaaatagaaca 54
             |||||||||||||||||||||
Sbjct: 99231 gaaatccaagcaaatagaaca 99251

>gb|AC124352.2| Mus musculus BAC clone RP24-477C23 from chromosome 9, complete sequence
          Length = 177886

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 34     gaaatccaagcaaatagaaca 54
              |||||||||||||||||||||
Sbjct: 134850 gaaatccaagcaaatagaaca 134870

>gb|AC162948.4| Mus musculus BAC clone RP23-14N2 from chromosome 9, complete sequence
          Length = 221791

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    gaaatccaagcaaatagaaca 54
             |||||||||||||||||||||
Sbjct: 69402 gaaatccaagcaaatagaaca 69382

>ref|XM_389402.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09226.1)
           partial mRNA
          Length = 2409

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 113 attcacgattcagagcaaaggttg 136
           |||||||||| |||||||||||||
Sbjct: 166 attcacgattgagagcaaaggttg 143

>emb|AL445605.7| Human DNA sequence from clone RP11-335D7 on chromosome 13, complete
            sequence
          Length = 45291

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 29   ctgcagaaatccaagcaaatagaa 52
            ||||||||| ||||||||||||||
Sbjct: 9936 ctgcagaaaaccaagcaaatagaa 9959

>gb|AC023545.16| Homo sapiens chromosome 15, clone RP11-665J16, complete sequence
          Length = 108173

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    ttctctgcagaaatccaagc 44
             ||||||||||||||||||||
Sbjct: 32196 ttctctgcagaaatccaagc 32215

>gb|AC020699.6| Homo sapiens BAC clone RP11-131K17 from 4, complete sequence
          Length = 186961

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     agaaatccaagcaaatagaa 52
              ||||||||||||||||||||
Sbjct: 127305 agaaatccaagcaaatagaa 127286

>gb|AC154720.2| Mus musculus BAC clone RP24-371C21 from chromosome 12, complete sequence
          Length = 167416

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     aatagaacagagaaacacct 65
              ||||||||||||||||||||
Sbjct: 120360 aatagaacagagaaacacct 120379

>gb|AC010931.17| Homo sapiens chromosome 15, clone RP11-247C2, complete sequence
          Length = 93600

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    ttctctgcagaaatccaagc 44
             ||||||||||||||||||||
Sbjct: 32003 ttctctgcagaaatccaagc 31984

>gb|AC145736.4| Mus musculus BAC clone RP24-296K18 from 9, complete sequence
          Length = 177964

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    caaatagaacagagaaacac 63
             ||||||||||||||||||||
Sbjct: 24686 caaatagaacagagaaacac 24667

>emb|CT025625.9| Mouse DNA sequence from clone RP23-449N15 on chromosome 12, complete
             sequence
          Length = 188300

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    aatagaacagagaaacacct 65
             ||||||||||||||||||||
Sbjct: 92747 aatagaacagagaaacacct 92728

>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence
          Length = 156835

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    agaacagagaaacacctct 67
             |||||||||||||||||||
Sbjct: 96843 agaacagagaaacacctct 96825

>ref|NM_120442.2| Arabidopsis thaliana carboxylic ester hydrolase/ hydrolase, acting
           on ester bonds AT5G03610 mRNA, complete cds
          Length = 1374

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 109 ccatattcacgattcagagcaaaggtt 135
           |||| |||| |||||||||||||||||
Sbjct: 139 ccattttcaagattcagagcaaaggtt 113

>ref|XM_760262.1| Theileria parva strain Muguga hypothetical protein (TP02_0788)
            partial mRNA
          Length = 2208

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 70   aagttgttaagtgtccatg 88
            |||||||||||||||||||
Sbjct: 2012 aagttgttaagtgtccatg 1994

>emb|AL683813.10| Human DNA sequence from clone RP11-1114A5 on chromosome X Contains the
             5' end of the ARHGEF6 gene for Rac/Cdc42 guanine
             nucleotide exchange factor (GEF) 6, a ribosomal protein L7
             (RPL7) pseudogene, a RAN member RAS oncogene family
             pseudogene, a novel gene, the RNMX gene for RNA binding
             motif protein (X chromosome), the 5' end of a novel gene
             and two CpG islands, complete sequence
          Length = 148654

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    atagaacagagaaacacct 65
             |||||||||||||||||||
Sbjct: 88686 atagaacagagaaacacct 88704

>emb|AL162590.15| Human DNA sequence from clone RP11-54K16 on chromosome 9p13.3-21.1
             Contains a cancer/testis antigen 1 (CTAG1) (LAGE2B)
             pseudogene, the DNAJA1 gene for DnaJ (Hsp40) homolog,
             subfamily A, member 1, the gene for homolog of C. elegans
             smu-1 (SMU-1) (FLJ10805), the 5' end of the  APTX gene for
             aprataxin and 3 CpG islands, complete sequence
          Length = 98271

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    tgtcattctctgcagaaat 38
             |||||||||||||||||||
Sbjct: 65991 tgtcattctctgcagaaat 65973

>emb|Z71998.1|MSPROTSM M.sativa mRNA for proteasome subunit
          Length = 509

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 56  agaaacacctctgcaagtt 74
           |||||||||||||||||||
Sbjct: 205 agaaacacctctgcaagtt 187

>gb|AF360329.1| Arabidopsis thaliana unknown protein (At5g03610) mRNA, complete cds
          Length = 1378

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 109 ccatattcacgattcagagcaaaggtt 135
           |||| |||| |||||||||||||||||
Sbjct: 139 ccattttcaagattcagagcaaaggtt 113

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 86      atgtctgccgtgatttgcg 104
               |||||||||||||||||||
Sbjct: 3367544 atgtctgccgtgatttgcg 3367526

>emb|AL162506.1|ATF17C15 Arabidopsis thaliana DNA chromosome 5, BAC clone F17C15 (ESSA project)
          Length = 102897

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 109   ccatattcacgattcagagcaaaggtt 135
             |||| |||| |||||||||||||||||
Sbjct: 10912 ccattttcaagattcagagcaaaggtt 10886

>emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in linkage group 7,
            complete sequence
          Length = 170764

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 114  ttcacgattcagagcaaag 132
            |||||||||||||||||||
Sbjct: 5998 ttcacgattcagagcaaag 6016

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 20       tgtcattctctgcagaaat 38
                |||||||||||||||||||
Sbjct: 10655112 tgtcattctctgcagaaat 10655094

>emb|BX830709.1|CNS09ZCV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS16ZF12 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1330

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 109 ccatattcacgattcagagcaaaggtt 135
           |||| |||| |||||||||||||||||
Sbjct: 108 ccattttcaagattcagagcaaaggtt 82

>emb|BX830859.1|CNS09YME Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS31ZE03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1304

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 109 ccatattcacgattcagagcaaaggtt 135
           |||| |||| |||||||||||||||||
Sbjct: 81  ccattttcaagattcagagcaaaggtt 55

>emb|BX829600.1|CNS09YOM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB24ZA01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1289

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 109 ccatattcacgattcagagcaaaggtt 135
           |||| |||| |||||||||||||||||
Sbjct: 110 ccattttcaagattcagagcaaaggtt 84

>gb|AC155805.2| Mus musculus BAC clone RP24-341E20 from chromosome 12, complete sequence
          Length = 199624

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     aagcaaatagaacagagaa 59
              |||||||||||||||||||
Sbjct: 100187 aagcaaatagaacagagaa 100169

>gb|AY085113.1| Arabidopsis thaliana clone 13022 mRNA, complete sequence
          Length = 1258

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                      
Query: 109 ccatattcacgattcagagcaaaggtt 135
           |||| |||| |||||||||||||||||
Sbjct: 38  ccattttcaagattcagagcaaaggtt 12

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 86      atgtctgccgtgatttgcg 104
               |||||||||||||||||||
Sbjct: 3466139 atgtctgccgtgatttgcg 3466121

>gb|AC016968.24| Homo sapiens 3 BAC RP11-59J16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152586

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 33    agaaatccaagcaaatagaacag 55
             |||||||||||||||||| ||||
Sbjct: 20152 agaaatccaagcaaatagcacag 20174

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 20       tgtcattctctgcagaaat 38
                |||||||||||||||||||
Sbjct: 10654811 tgtcattctctgcagaaat 10654793

>gb|AC159636.3| Mus musculus BAC clone RP24-93H15 from chromosome 12, complete sequence
          Length = 184821

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 54    agagaaacacctctgcaagttgt 76
             |||||| ||||||||||||||||
Sbjct: 79284 agagaatcacctctgcaagttgt 79262

>emb|AL831795.4|CNS08CA8 Oryza sativa chromosome 12, . BAC OSJNBb0085N21 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135105

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    tgtcattctctgcagaaat 38
             |||||||||||||||||||
Sbjct: 20008 tgtcattctctgcagaaat 19990

>emb|AL805970.8| Mouse DNA sequence from clone RP23-438O3 on chromosome 4, complete
              sequence
          Length = 180421

 Score = 38.2 bits (19), Expect = 6.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 33     agaaatccaagcaaataga 51
              |||||||||||||||||||
Sbjct: 128663 agaaatccaagcaaataga 128645


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,155,988
Number of Sequences: 3902068
Number of extensions: 1155988
Number of successful extensions: 79759
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79597
Number of HSP's gapped (non-prelim): 162
length of query: 143
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 122
effective length of database: 17,151,101,840
effective search space: 2092434424480
effective search space used: 2092434424480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)