ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal7g14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SUBL_ARATH (O65351) Subtilisin-like protease precursor (EC 3.4.2... 36 0.025
2MTSS1_MOUSE (Q8R1S4) Metastasis suppressor protein 1 (Missing in... 29 2.3
3DHYS_METKA (Q8TXD7) Probable deoxyhypusine synthase (EC 2.5.1.46... 29 3.1
4YRAJ_ECOLI (P42915) Hypothetical outer membrane usher protein yr... 28 4.0
5MOT1_HUMAN (P53985) Monocarboxylate transporter 1 (MCT 1) 28 5.2
6PPCK_AZOSE (Q5P2P8) Phosphoenolpyruvate carboxykinase [GTP] (EC ... 28 5.2
7CUCM1_CUCME (Q39547) Cucumisin precursor (EC 3.4.21.25) (Allerge... 28 6.8
8ATKA_HALSA (P57684) Potassium-transporting ATPase A chain (EC 3.... 27 8.9
9Y272_SYNY3 (P73893) Hypothetical protein slr0272 27 8.9

>SUBL_ARATH (O65351) Subtilisin-like protease precursor (EC 3.4.21.-)|
           (Cucumisin-like serine protease)
          Length = 757

 Score = 35.8 bits (81), Expect = 0.025
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 401 WSDGKHTVASPIALTWT 351
           WSDGKH V SP+A++WT
Sbjct: 741 WSDGKHVVGSPVAISWT 757



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>MTSS1_MOUSE (Q8R1S4) Metastasis suppressor protein 1 (Missing in metastasis|
           protein)
          Length = 759

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +3

Query: 123 ITQSLSIITISPPNHNLKVMIGPY*HFEIFERY-HQISSFSSPESPQFYTLNPFGRTSSG 299
           ++   S  ++S  +H   V  GP+ H     R   +++S   P+   +YT+ P    SS 
Sbjct: 350 LSNGFSHCSLSSESHAGPVGAGPFPHCLPASRLLPRVTSVHLPDYAHYYTIGPGMFPSSQ 409

Query: 300 VSSWRSAWAVLG 335
           + SW+  WA  G
Sbjct: 410 IPSWKD-WAKPG 420



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>DHYS_METKA (Q8TXD7) Probable deoxyhypusine synthase (EC 2.5.1.46) (DHS)|
          Length = 297

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +2

Query: 311 ALGLGRFGRACRIMSKLTLSD 373
           ALG GR GRA RI+ K+  SD
Sbjct: 26  ALGAGRLGRAARILEKMWSSD 46



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>YRAJ_ECOLI (P42915) Hypothetical outer membrane usher protein yraJ precursor|
          Length = 838

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -2

Query: 91  QSWVVGLGPELDQTCSFARSXP 26
           QSW V  G + DQ C FA S P
Sbjct: 801 QSWTVRWGNQADQQCQFAFSTP 822



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>MOT1_HUMAN (P53985) Monocarboxylate transporter 1 (MCT 1)|
          Length = 500

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 180 MIGPY*HFEIFERYHQISSFSSPESPQFY-TLNPFGRTSSGVSSWRSAWAVLGAPVESC 353
           MIG Y     ++R    +  +   SP F  TL P  +   G+  WR ++ +LG  + +C
Sbjct: 134 MIGKY----FYKRRPLANGLAMAGSPVFLCTLAPLNQVFFGIFGWRGSFLILGGLLLNC 188



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>PPCK_AZOSE (Q5P2P8) Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) (PEP|
           carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK)
          Length = 614

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 136 RDWVMGILAFLEPHYQSWVVGLGPELDQTCS 44
           + WV GI A  EP    W  G   E D+ C+
Sbjct: 23  KKWVAGIAALTEPERVVWCDGSEEEYDRLCT 53



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>CUCM1_CUCME (Q39547) Cucumisin precursor (EC 3.4.21.25) (Allergen Cuc m 1)|
          Length = 731

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 404 VWSDGKHTVASPIALT 357
           VWSDG H V SPI +T
Sbjct: 713 VWSDGVHYVRSPITIT 728



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>ATKA_HALSA (P57684) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 582

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 246 PESPQFYTLNPFGRTSSGVSSWRSAWAVLGA 338
           P +   + L+  G T+ GV+S  ++W  LGA
Sbjct: 352 PTASAIWGLSTTGTTNGGVNSMHNSWTALGA 382



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>Y272_SYNY3 (P73893) Hypothetical protein slr0272|
          Length = 325

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
 Frame = +3

Query: 117 IPITQSLS------IITISPPNHNLKVMIGPY*HFEIFERYHQISSFSSPESPQFYTLN 275
           IPIT  L+      I+T+ PPN  L+V +G        +R   I    SP + +  +LN
Sbjct: 189 IPITVELNQNKDQIIVTVLPPNSELQVGVG--------QRVKGIDDLDSPSNSRDNSLN 239


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,347,050
Number of Sequences: 219361
Number of extensions: 1082966
Number of successful extensions: 2524
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2524
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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